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The map label for this gene is ykuI [H]

Identifier: 229918088

GI number: 229918088

Start: 2320060

End: 2321244

Strand: Direct

Name: ykuI [H]

Synonym: EAT1b_2368

Alternate gene names: 229918088

Gene position: 2320060-2321244 (Clockwise)

Preceding gene: 229918087

Following gene: 229918089

Centisome position: 77.34

GC content: 47.34

Gene sequence:

>1185_bases
GTGGATGCGGTAGAAGTGATGGTCCATCCTGAAGAAGTGATGGTGACGTATGAACCAATCCTTGGGGCGGCGACGTTTCA
AGTGGAAGGATATATGGTACATGGACGATTCCGAGGTGAATCATTGACACCGTTTTTTTATGATGATGACGTTCCCCTCG
AGTATCAATTAGACATCGCCCAACGAATGGAGCAACTCGCGGCAGCACAACTTCGTGACGCCAAACCATTCGTCACGTTC
AGATGCCGGTCGGAATGGATTCTCGAAGAAGGGGGAGAGGCCTTTTTAGCCCCGCTACGTGAACTCAATTTTCCGTTACA
CCGTATTTATGTGACCTTACAAGGAACAGACTTGGTCGACGTCCCGCGACTGTCCCGCGTCATTCAATATTATCGGTCCT
ATGGATTGAAAATTGCATTAGACTTTGCCGAATCCACGAGTATCGAAGACATCATGACGCTTGCGCCAGAATTATTGCTC
GTCGACCTTGGCACGATGATTGAGAAAAAGACGTTGTCGGTCACCTATCCGAACTTGCTTCAGACGATGGAGTATATCGC
TTCGAAGCTCGGTGCCCCGCTTCTTTACAAATCCATCGACCACATCGGACAGCTTCGTTACGCGTGGCAGCACGGTGGTC
GCTATTACATGGGTGGTCTACTTGGCTTGGAAGATGAGGTCCCTCAACGAGAAATCAAAGGAATGGGTGTGTTGGCACAA
GAAGTGCCTTCCTTCTTTTTACATGACCAGAAACGATTGAATCGCTTGTACGAGCTTGAATTTGAATTACATCGCCGGAT
TGGAGAACTTGTTCAATCTGGAAAGTGGTCGAGAGACAAGAAAGACGAGTGGATTCAATTCATCGCCCCAAAACTGGAAG
AGGTGTTTGTTCGTTATTATATAACGGATAAGACAGGTTTCCAGACGAGTGCGAACGTCTACTGCGTGAATGGAGAATGG
CGTGTCGATAATACGTATCGGGGCTATAACTGGAGTTTCCGACCGTATTTCATTCAGACGATGGCGGCGATGGATGTTAG
AGGGCGAGGCTATTTGTCGGGAGACTATCGTGATTTCAGTTCGAATGAAGTGACGCGAACGTTCAGCTATCCGTTACCGG
ACGGCATGTTCTTATTTGCCGACATCTCTGAAGAATATTTATATCAAAATCGATTATTGGATTGA

Upstream 100 bases:

>100_bases
ATCGCCTATTTTATTGCTTGTTTCGGTGCCTATATGTATGTACACACGCGAACGAGCTGATTGTAGCTCGTTTTCGCATT
TAACGAAGAGGTGATGAATT

Downstream 100 bases:

>100_bases
AAGGAAGATGGACGATGCTAGATTATGATTACGATGCATTGCGCGAAATCGGGCGAATCGTCGCACTTGCGCGAGATGAA
ATGGCGAAAGCCGTCAAGCC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDAVEVMVHPEEVMVTYEPILGAATFQVEGYMVHGRFRGESLTPFFYDDDVPLEYQLDIAQRMEQLAAAQLRDAKPFVTF
RCRSEWILEEGGEAFLAPLRELNFPLHRIYVTLQGTDLVDVPRLSRVIQYYRSYGLKIALDFAESTSIEDIMTLAPELLL
VDLGTMIEKKTLSVTYPNLLQTMEYIASKLGAPLLYKSIDHIGQLRYAWQHGGRYYMGGLLGLEDEVPQREIKGMGVLAQ
EVPSFFLHDQKRLNRLYELEFELHRRIGELVQSGKWSRDKKDEWIQFIAPKLEEVFVRYYITDKTGFQTSANVYCVNGEW
RVDNTYRGYNWSFRPYFIQTMAAMDVRGRGYLSGDYRDFSSNEVTRTFSYPLPDGMFLFADISEEYLYQNRLLD

Sequences:

>Translated_394_residues
MDAVEVMVHPEEVMVTYEPILGAATFQVEGYMVHGRFRGESLTPFFYDDDVPLEYQLDIAQRMEQLAAAQLRDAKPFVTF
RCRSEWILEEGGEAFLAPLRELNFPLHRIYVTLQGTDLVDVPRLSRVIQYYRSYGLKIALDFAESTSIEDIMTLAPELLL
VDLGTMIEKKTLSVTYPNLLQTMEYIASKLGAPLLYKSIDHIGQLRYAWQHGGRYYMGGLLGLEDEVPQREIKGMGVLAQ
EVPSFFLHDQKRLNRLYELEFELHRRIGELVQSGKWSRDKKDEWIQFIAPKLEEVFVRYYITDKTGFQTSANVYCVNGEW
RVDNTYRGYNWSFRPYFIQTMAAMDVRGRGYLSGDYRDFSSNEVTRTFSYPLPDGMFLFADISEEYLYQNRLLD
>Mature_394_residues
MDAVEVMVHPEEVMVTYEPILGAATFQVEGYMVHGRFRGESLTPFFYDDDVPLEYQLDIAQRMEQLAAAQLRDAKPFVTF
RCRSEWILEEGGEAFLAPLRELNFPLHRIYVTLQGTDLVDVPRLSRVIQYYRSYGLKIALDFAESTSIEDIMTLAPELLL
VDLGTMIEKKTLSVTYPNLLQTMEYIASKLGAPLLYKSIDHIGQLRYAWQHGGRYYMGGLLGLEDEVPQREIKGMGVLAQ
EVPSFFLHDQKRLNRLYELEFELHRRIGELVQSGKWSRDKKDEWIQFIAPKLEEVFVRYYITDKTGFQTSANVYCVNGEW
RVDNTYRGYNWSFRPYFIQTMAAMDVRGRGYLSGDYRDFSSNEVTRTFSYPLPDGMFLFADISEEYLYQNRLLD

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 45887; Mature: 45887

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVEVMVHPEEVMVTYEPILGAATFQVEGYMVHGRFRGESLTPFFYDDDVPLEYQLDIA
CCCEEEEECCHHEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEECCCCCEEEEECHH
QRMEQLAAAQLRDAKPFVTFRCRSEWILEEGGEAFLAPLRELNFPLHRIYVTLQGTDLVD
HHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCC
VPRLSRVIQYYRSYGLKIALDFAESTSIEDIMTLAPELLLVDLGTMIEKKTLSVTYPNLL
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHH
QTMEYIASKLGAPLLYKSIDHIGQLRYAWQHGGRYYMGGLLGLEDEVPQREIKGMGVLAQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCHHHHCCCCHHHH
EVPSFFLHDQKRLNRLYELEFELHRRIGELVQSGKWSRDKKDEWIQFIAPKLEEVFVRYY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEE
ITDKTGFQTSANVYCVNGEWRVDNTYRGYNWSFRPYFIQTMAAMDVRGRGYLSGDYRDFS
EECCCCCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCC
SNEVTRTFSYPLPDGMFLFADISEEYLYQNRLLD
CCCEEEEEECCCCCCEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure
MDAVEVMVHPEEVMVTYEPILGAATFQVEGYMVHGRFRGESLTPFFYDDDVPLEYQLDIA
CCCEEEEECCHHEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCEEECCCCCEEEEECHH
QRMEQLAAAQLRDAKPFVTFRCRSEWILEEGGEAFLAPLRELNFPLHRIYVTLQGTDLVD
HHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCC
VPRLSRVIQYYRSYGLKIALDFAESTSIEDIMTLAPELLLVDLGTMIEKKTLSVTYPNLL
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHH
QTMEYIASKLGAPLLYKSIDHIGQLRYAWQHGGRYYMGGLLGLEDEVPQREIKGMGVLAQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCHHHHCCCCHHHH
EVPSFFLHDQKRLNRLYELEFELHRRIGELVQSGKWSRDKKDEWIQFIAPKLEEVFVRYY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEE
ITDKTGFQTSANVYCVNGEWRVDNTYRGYNWSFRPYFIQTMAAMDVRGRGYLSGDYRDFS
EECCCCCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCC
SNEVTRTFSYPLPDGMFLFADISEEYLYQNRLLD
CCCEEEEEECCCCCCEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]