Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is cshA [H]

Identifier: 229918086

GI number: 229918086

Start: 2318138

End: 2319667

Strand: Direct

Name: cshA [H]

Synonym: EAT1b_2366

Alternate gene names: 229918086

Gene position: 2318138-2319667 (Clockwise)

Preceding gene: 229918085

Following gene: 229918087

Centisome position: 77.27

GC content: 49.15

Gene sequence:

>1530_bases
TTGACAAAATTTCAAGACTTACAATTAAGTGAAGCATTAGTAAAAGGTGTACACAAAATGGGCTTCGAGGAAGCTACACC
GATCCAAGCTGAGACAATTCCTGTCGCACTCACGGGAGTGGACGTATTAGGACAAGCACAAACAGGTACAGGGAAAACAG
CAGCTTTCGGTATTCCGACAATTGAGCGAATCGATTCAAAGGCGCGTCAAGTCCAAGCACTCGTTCTTGCACCGACACGT
GAACTTGCGATTCAAGTTGCAGAAGAATTAAACAAAATCGGTGAAACGAAACGCGTATACGCACTTCCAGTATACGGTGG
TCAACAAATTGACCGTCAGATCCGTGGTTTGAAAAAGAACCCGCAAATCGTCGTAGCGACACCAGGACGTCTCATGGACC
ACATGAAGCGTAAGACAATCAAACTCGATGACATTCAAACAGTCATCTTGGATGAAGCGGATGAAATGCTCAACATGGGC
TTCGTTGAAGATATCGAAACGATTTTGGCTGGTCTTCCTGAAGAGCGCCAAACGCTTCTATTCTCAGCGACAATGCCACC
ACAAATCAAAAAGATTGCTGAGCGCTTCATGAAGTCGCCGACAATCATCAAAGTCAAAGCGAAAGAAATGACAGTTGAGA
ACATCAACCAGCAATTCCTCGAATTGCGTGAAGGTCAAAAATTCGATACACTTTGCCGTTTGATTGACATCGATTCACCA
GAACTCAGCATCATCTTCGCTCGTACGAAGAAACGTGTAGATGAAGTGACAGAGGCACTCATCAAACGCGGATACACTGC
AGACGGTCTTCACGGAGACTTGACGCAATCAAAACGTGACCAAGTCATTCGTCGTTTCAAAAACGGAACAATCGATATCT
TGGTAGCGACTGACGTTGCGGCACGTGGACTTGATATTTCAGGTGTCACACACGTTTACAACTTCGATGTACCACAAGAC
CCAGAAAGCTACGTACACCGCATCGGTCGTACAGGTCGCGCTGGTAAGACTGGTACAGCCCTCACGTTCATCACGCCACG
TGAATTTGGACAAGTGAAGGCAATCGAGCGTGTGACGAACAAGAAGATGAACCGTCGTCACGTACCGACAATCGCGGAAG
TTCTTGAAGGAAACCAAAAGCAAGCAGCTGAAGAGTTGATCGAACGCGTTCAAGCGGGCGACTTCAAAGCTTACACGCAA
CTTGCGACAGAGCTTCTTGAAGAGTACGAGGCAGTTGAAATTCTCGCTGCTGCCCTTCGTGGATTGACGAAAGAGCCAGA
TTCAACACCTGTTGAAATCTCGTACGCTGAACCAGTTCGTGTAAAACGCCAAGGTGGTCGTGGTGGCGATCGCGGTGGAT
ACCGTGGTCGTAACGACCGTCGTGGCGGTGGCGGTGGCCGTGGTGGCGATCGTCGTGGTGGACGCGGTGGCGAACGTCGT
GATGGACGCAGTGGAGACCGTAAAGGATCATTCCGTGGTGACGATCGTCGTCGCTCGGATGACCGTGGTCCACGCCGTCC
GCGTGACTAA

Upstream 100 bases:

>100_bases
ATAGTTAATAAAGTTGACTATGAGGAAACATTGAGAAAACGTCTGTAGATCTGTCAAACTGAACTCAGACGTTTTTTGTA
TGAACAAAGGAGAATATAAT

Downstream 100 bases:

>100_bases
TCATCGTGAAATGCCGCATTTCCTTAAGTGGATTTGCGGCATTTTTTATTGTGTCGTGCTACACTAGTTGAGTAGAGATA
GAAGGATGAGGTGTCAACGG

Product: DEAD/DEAH box helicase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MTKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPTIERIDSKARQVQALVLAPTR
ELAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKNPQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMG
FVEDIETILAGLPEERQTLLFSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSP
ELSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVAARGLDISGVTHVYNFDVPQD
PESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTNKKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQ
LATELLEEYEAVEILAAALRGLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERR
DGRSGDRKGSFRGDDRRRSDDRGPRRPRD

Sequences:

>Translated_509_residues
MTKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPTIERIDSKARQVQALVLAPTR
ELAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKNPQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMG
FVEDIETILAGLPEERQTLLFSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSP
ELSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVAARGLDISGVTHVYNFDVPQD
PESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTNKKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQ
LATELLEEYEAVEILAAALRGLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERR
DGRSGDRKGSFRGDDRRRSDDRGPRRPRD
>Mature_508_residues
TKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPTIERIDSKARQVQALVLAPTRE
LAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKNPQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMGF
VEDIETILAGLPEERQTLLFSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSPE
LSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVAARGLDISGVTHVYNFDVPQDP
ESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTNKKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQL
ATELLEEYEAVEILAAALRGLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERRD
GRSGDRKGSFRGDDRRRSDDRGPRRPRD

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=39.2265193370166, Blast_Score=288, Evalue=1e-77,
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=39.9463806970509, Blast_Score=265, Evalue=8e-71,
Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=39.6825396825397, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=39.6825396825397, Blast_Score=264, Evalue=2e-70,
Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=39.6825396825397, Blast_Score=264, Evalue=2e-70,
Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=38.2271468144044, Blast_Score=263, Evalue=2e-70,
Organism=Homo sapiens, GI4758138, Length=386, Percent_Identity=38.60103626943, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=37.9888268156425, Blast_Score=261, Evalue=9e-70,
Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=39.1666666666667, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI4503529, Length=363, Percent_Identity=38.5674931129477, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI222352149, Length=406, Percent_Identity=37.9310344827586, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI169881239, Length=381, Percent_Identity=39.1076115485564, Blast_Score=258, Evalue=7e-69,
Organism=Homo sapiens, GI13514809, Length=381, Percent_Identity=39.1076115485564, Blast_Score=258, Evalue=7e-69,
Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=38.6058981233244, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=38.6058981233244, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=38.3098591549296, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=38.3098591549296, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=38.3098591549296, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI41327771, Length=381, Percent_Identity=37.7952755905512, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=38.3098591549296, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=38.7005649717514, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=38.7005649717514, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI50659095, Length=430, Percent_Identity=36.9767441860465, Blast_Score=248, Evalue=9e-66,
Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=38.0208333333333, Blast_Score=244, Evalue=9e-65,
Organism=Homo sapiens, GI13129006, Length=430, Percent_Identity=36.9767441860465, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI164419743, Length=349, Percent_Identity=35.5300859598854, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI51094101, Length=349, Percent_Identity=35.5300859598854, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.9213483146067, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=36.7977528089888, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI41327773, Length=347, Percent_Identity=38.328530259366, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=36.676217765043, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=35.4570637119114, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=34.393063583815, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=34.393063583815, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=33.8150289017341, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=35.989010989011, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=35.0267379679144, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI8922886, Length=378, Percent_Identity=35.978835978836, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=35.4497354497354, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=33.9779005524862, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=35.3591160220994, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=30.1408450704225, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=35.693215339233, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI38327634, Length=371, Percent_Identity=34.2318059299191, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=32.122905027933, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=32.122905027933, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=29.2191435768262, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=29.0556900726392, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI256773275, Length=418, Percent_Identity=27.9904306220096, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=31.7901234567901, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=30.1492537313433, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI154759257, Length=407, Percent_Identity=26.5356265356265, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.953488372093, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI87082221, Length=455, Percent_Identity=43.2967032967033, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1787605, Length=376, Percent_Identity=43.3510638297872, Blast_Score=305, Evalue=3e-84,
Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=39.5161290322581, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1790214, Length=363, Percent_Identity=40.771349862259, Blast_Score=271, Evalue=6e-74,
Organism=Escherichia coli, GI1788930, Length=350, Percent_Identity=39.1428571428571, Blast_Score=221, Evalue=1e-58,
Organism=Escherichia coli, GI48994977, Length=342, Percent_Identity=23.0994152046784, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987143, Length=355, Percent_Identity=40.8450704225352, Blast_Score=303, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=39.2265193370166, Blast_Score=286, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=38.9502762430939, Blast_Score=285, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=37.0165745856354, Blast_Score=252, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17552114, Length=359, Percent_Identity=35.3760445682451, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI115533224, Length=368, Percent_Identity=38.3152173913043, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=35.5263157894737, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=39.0243902439024, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=38.6627906976744, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=369, Percent_Identity=38.2113821138211, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=38.2113821138211, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=38.4615384615385, Blast_Score=238, Evalue=7e-63,
Organism=Caenorhabditis elegans, GI17510559, Length=372, Percent_Identity=36.0215053763441, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=35.9042553191489, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=35.9042553191489, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=34.8571428571429, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=33.972602739726, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17507945, Length=359, Percent_Identity=37.3259052924791, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17537549, Length=353, Percent_Identity=35.9773371104816, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=36.5853658536585, Blast_Score=221, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=34.5403899721448, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=32.6589595375723, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=36.8279569892473, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=36.3881401617251, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=33.8753387533875, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=33.1683168316832, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=33.1683168316832, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17536103, Length=373, Percent_Identity=34.8525469168901, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=31.3390313390313, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=32.133676092545, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=33.5149863760218, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=28.9473684210526, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=27.0334928229665, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17556951, Length=404, Percent_Identity=30.4455445544554, Blast_Score=162, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=424, Percent_Identity=29.9528301886792, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=27.7044854881267, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=32.8282828282828, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.3636363636364, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=26.2390670553936, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17507641, Length=200, Percent_Identity=36, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=356, Percent_Identity=26.123595505618, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI32564046, Length=187, Percent_Identity=36.8983957219251, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=44.5652173913043, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17566630, Length=327, Percent_Identity=28.7461773700306, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=38.1471389645777, Blast_Score=287, Evalue=3e-78,
Organism=Saccharomyces cerevisiae, GI6324217, Length=375, Percent_Identity=39.2, Blast_Score=273, Evalue=6e-74,
Organism=Saccharomyces cerevisiae, GI6325138, Length=392, Percent_Identity=39.5408163265306, Blast_Score=270, Evalue=5e-73,
Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=38.6842105263158, Blast_Score=263, Evalue=7e-71,
Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=39.2370572207085, Blast_Score=262, Evalue=8e-71,
Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=39.7790055248619, Blast_Score=259, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=39.7790055248619, Blast_Score=259, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6320041, Length=354, Percent_Identity=38.135593220339, Blast_Score=257, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=41.6201117318436, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6323021, Length=432, Percent_Identity=35.1851851851852, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=35.5191256830601, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321963, Length=386, Percent_Identity=33.9378238341969, Blast_Score=214, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6323947, Length=380, Percent_Identity=36.3157894736842, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6322427, Length=375, Percent_Identity=34.1333333333333, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=33.4261838440111, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6319714, Length=389, Percent_Identity=31.8766066838046, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=35.6545961002786, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=32.360097323601, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=33.9331619537275, Blast_Score=186, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321267, Length=375, Percent_Identity=36, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=32.7956989247312, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6323306, Length=437, Percent_Identity=29.2906178489703, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=235, Percent_Identity=33.1914893617021, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6322876, Length=431, Percent_Identity=27.6102088167053, Blast_Score=126, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=347, Percent_Identity=26.2247838616715, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6321374, Length=398, Percent_Identity=24.8743718592965, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6323844, Length=378, Percent_Identity=20.3703703703704, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=39.5027624309392, Blast_Score=287, Evalue=9e-78,
Organism=Drosophila melanogaster, GI24582080, Length=356, Percent_Identity=40.1685393258427, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI24582078, Length=356, Percent_Identity=40.1685393258427, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI17136248, Length=356, Percent_Identity=40.1685393258427, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI24582075, Length=356, Percent_Identity=40.1685393258427, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=41.2398921832884, Blast_Score=267, Evalue=2e-71,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=40.625, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24644479, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24644483, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI281361218, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24644481, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI21356161, Length=384, Percent_Identity=39.84375, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24644487, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI45551833, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24644485, Length=378, Percent_Identity=39.1534391534392, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=38.6363636363636, Blast_Score=261, Evalue=6e-70,
Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=38.5041551246537, Blast_Score=258, Evalue=7e-69,
Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=37.7464788732394, Blast_Score=255, Evalue=6e-68,
Organism=Drosophila melanogaster, GI24642151, Length=341, Percent_Identity=39.2961876832845, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=37.9213483146067, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=34.5505617977528, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=34.5505617977528, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI18857967, Length=374, Percent_Identity=35.5614973262032, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI28575014, Length=365, Percent_Identity=33.972602739726, Blast_Score=238, Evalue=9e-63,
Organism=Drosophila melanogaster, GI24584994, Length=369, Percent_Identity=37.3983739837398, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.9550561797753, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI17136814, Length=367, Percent_Identity=38.4196185286104, Blast_Score=225, Evalue=6e-59,
Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=38.5852090032154, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=32.8530259365994, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=32.8530259365994, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=32.8530259365994, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI21355559, Length=422, Percent_Identity=33.6492890995261, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=34.9030470914127, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=34.9030470914127, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=30.1675977653631, Blast_Score=183, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=32.171581769437, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=30.0254452926209, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24666101, Length=362, Percent_Identity=31.767955801105, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI20130173, Length=447, Percent_Identity=28.8590604026846, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI18859659, Length=446, Percent_Identity=28.9237668161435, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI28571338, Length=446, Percent_Identity=28.9237668161435, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=29.5081967213115, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=30.7692307692308, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24640164, Length=378, Percent_Identity=24.8677248677249, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI17136666, Length=429, Percent_Identity=25.6410256410256, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24646066, Length=374, Percent_Identity=21.9251336898396, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 56559; Mature: 56428

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPT
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCEEEECCCH
IERIDSKARQVQALVLAPTRELAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKN
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCC
PQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMGFVEDIETILAGLPEERQTLL
CEEEEECCHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHEEE
FSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSP
EECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
ELSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVA
CEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHH
ARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTN
HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
KKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQLATELLEEYEAVEILAAALR
HHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERR
CCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGRSGDRKGSFRGDDRRRSDDRGPRRPRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCEEEECCCH
IERIDSKARQVQALVLAPTRELAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKN
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCC
PQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMGFVEDIETILAGLPEERQTLL
CEEEEECCHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHEEE
FSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSP
EECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
ELSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVA
CEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHH
ARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTN
HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
KKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQLATELLEEYEAVEILAAALR
HHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERR
CCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGRSGDRKGSFRGDDRRRSDDRGPRRPRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA