| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yitL [H]
Identifier: 229918085
GI number: 229918085
Start: 2317116
End: 2317967
Strand: Direct
Name: yitL [H]
Synonym: EAT1b_2365
Alternate gene names: 229918085
Gene position: 2317116-2317967 (Clockwise)
Preceding gene: 229918080
Following gene: 229918086
Centisome position: 77.24
GC content: 48.59
Gene sequence:
>852_bases ATGGCATTGCGCGCAGGAGAAGTAGTAGATTTAGTCGCGGAACGTTCTGCTGATTTTGGAGTATTCATTAGTAACGGCCG CGAAGAGGTGCTCCTTCACCGTAAAGAACAGACAGAAGAAGTGACGATCGGTCAAACGGTTCGCGTCTTCTTATATCATG ATTCAGAAGGACGTCTCGCATCAACGATGACGATTCCTACCGTTTCATTTGATGAGTATGAATGGTTTGAGGTAACCGGC GTCCGGTACAACACAGGGGTCTTCGTAAATATCGGAATTCAAAAGGACGTTCTCGTTTCAATGGATGACTTACCGGAGAA CCGGTCGTATTGGCCGCAGACAGGCGATCAATTGTGCATTCGCTTGAAGTATGACCAAAAAGGACGTTTGCTTGGGGACC CTGCACCATATGCGTTCTTGAACTTGTTGGCACGACCGTCGAAAGAAGAATGGAATAACCAGGACGTGCAGGCCATCGTC GTCAATAAACGTGAAGTGGGCGTCAACGTATGGGTCGAAGGCGAATCACTCGGTTTCTTGCATGAGGCAGAGATGACGCG TTGGCCACGTCTCGGAGAACAGTTGACCGTTCGTGTGACGCAGGTCAAACAAGATGGTACGGTCCTCGTTTCGATGAAGC CACGTGCGTACGAGGCGATTGATGGTGATGCGGCGAGCATACTCTCGTATATTGAAGAACGTGGTGGCCAAATGCCATAC GGTGATAAGACATCACCTGACATCATCGACCGTGAATTCGGGATGAGTAAAGCGGCATTTAAACGAGCGCTTGGAAAACT GTTGAAAGAGAAGCAAGTTGAAAAGCTCGACAACGGCTACAAATTGAAATAA
Upstream 100 bases:
>100_bases GACACATTTATTCAAAATGTTGAAAGAGAACATGATATGATTAGGAACGTGTGTAGATAGGTATACTGACAGTAATAGCT TAGAAAAGGATGTGGGTGTA
Downstream 100 bases:
>100_bases GATAACTCATGTTCGGGTGACATGAAAAAGTTTGAAAATGTATTTCTTTCATTTTAGGAAGAAATACGTTATAGTTAATA AAGTTGACTATGAGGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTG VRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIV VNKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK
Sequences:
>Translated_283_residues MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTG VRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIV VNKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK >Mature_282_residues ALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTGV RYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVV NKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPYG DKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32070; Mature: 31939
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLA CCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCCCEE STMTIPTVSFDEYEWFEVTGVRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCI EEEEECEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE RLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVVNKREVGVNVWVEGESLGFL EEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEEEEECEECCEEEEEECCCCCEE HEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY EHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCC GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLA CCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCCCEE STMTIPTVSFDEYEWFEVTGVRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCI EEEEECEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE RLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVVNKREVGVNVWVEGESLGFL EEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEEEEECEECCEEEEEECCCCCEE HEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY EHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCC GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]