Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yitL [H]

Identifier: 229918085

GI number: 229918085

Start: 2317116

End: 2317967

Strand: Direct

Name: yitL [H]

Synonym: EAT1b_2365

Alternate gene names: 229918085

Gene position: 2317116-2317967 (Clockwise)

Preceding gene: 229918080

Following gene: 229918086

Centisome position: 77.24

GC content: 48.59

Gene sequence:

>852_bases
ATGGCATTGCGCGCAGGAGAAGTAGTAGATTTAGTCGCGGAACGTTCTGCTGATTTTGGAGTATTCATTAGTAACGGCCG
CGAAGAGGTGCTCCTTCACCGTAAAGAACAGACAGAAGAAGTGACGATCGGTCAAACGGTTCGCGTCTTCTTATATCATG
ATTCAGAAGGACGTCTCGCATCAACGATGACGATTCCTACCGTTTCATTTGATGAGTATGAATGGTTTGAGGTAACCGGC
GTCCGGTACAACACAGGGGTCTTCGTAAATATCGGAATTCAAAAGGACGTTCTCGTTTCAATGGATGACTTACCGGAGAA
CCGGTCGTATTGGCCGCAGACAGGCGATCAATTGTGCATTCGCTTGAAGTATGACCAAAAAGGACGTTTGCTTGGGGACC
CTGCACCATATGCGTTCTTGAACTTGTTGGCACGACCGTCGAAAGAAGAATGGAATAACCAGGACGTGCAGGCCATCGTC
GTCAATAAACGTGAAGTGGGCGTCAACGTATGGGTCGAAGGCGAATCACTCGGTTTCTTGCATGAGGCAGAGATGACGCG
TTGGCCACGTCTCGGAGAACAGTTGACCGTTCGTGTGACGCAGGTCAAACAAGATGGTACGGTCCTCGTTTCGATGAAGC
CACGTGCGTACGAGGCGATTGATGGTGATGCGGCGAGCATACTCTCGTATATTGAAGAACGTGGTGGCCAAATGCCATAC
GGTGATAAGACATCACCTGACATCATCGACCGTGAATTCGGGATGAGTAAAGCGGCATTTAAACGAGCGCTTGGAAAACT
GTTGAAAGAGAAGCAAGTTGAAAAGCTCGACAACGGCTACAAATTGAAATAA

Upstream 100 bases:

>100_bases
GACACATTTATTCAAAATGTTGAAAGAGAACATGATATGATTAGGAACGTGTGTAGATAGGTATACTGACAGTAATAGCT
TAGAAAAGGATGTGGGTGTA

Downstream 100 bases:

>100_bases
GATAACTCATGTTCGGGTGACATGAAAAAGTTTGAAAATGTATTTCTTTCATTTTAGGAAGAAATACGTTATAGTTAATA
AAGTTGACTATGAGGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTG
VRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIV
VNKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY
GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK

Sequences:

>Translated_283_residues
MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTG
VRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIV
VNKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY
GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK
>Mature_282_residues
ALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLASTMTIPTVSFDEYEWFEVTGV
RYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCIRLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVV
NKREVGVNVWVEGESLGFLHEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPYG
DKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32070; Mature: 31939

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLA
CCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCCCEE
STMTIPTVSFDEYEWFEVTGVRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCI
EEEEECEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
RLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVVNKREVGVNVWVEGESLGFL
EEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEEEEECEECCEEEEEECCCCCEE
HEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY
EHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCC
GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALRAGEVVDLVAERSADFGVFISNGREEVLLHRKEQTEEVTIGQTVRVFLYHDSEGRLA
CCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCCCEE
STMTIPTVSFDEYEWFEVTGVRYNTGVFVNIGIQKDVLVSMDDLPENRSYWPQTGDQLCI
EEEEECEEECCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
RLKYDQKGRLLGDPAPYAFLNLLARPSKEEWNNQDVQAIVVNKREVGVNVWVEGESLGFL
EEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCEEEEEEECEECCEEEEEECCCCCEE
HEAEMTRWPRLGEQLTVRVTQVKQDGTVLVSMKPRAYEAIDGDAASILSYIEERGGQMPY
EHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCC
GDKTSPDIIDREFGMSKAAFKRALGKLLKEKQVEKLDNGYKLK
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]