| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is pbuG [H]
Identifier: 229917940
GI number: 229917940
Start: 2156840
End: 2158201
Strand: Direct
Name: pbuG [H]
Synonym: EAT1b_2219
Alternate gene names: 229917940
Gene position: 2156840-2158201 (Clockwise)
Preceding gene: 229917939
Following gene: 229917942
Centisome position: 71.9
GC content: 50.0
Gene sequence:
>1362_bases ATGAGCACACAGCTCAAGCAAGAACAGCAACAACCATCAACAACGAGTCGGATCGATCGTTACTTCCAACTCACAGCACT CGGTACGAGTGTCCGCACGGAACTGATCGCAGGATTTACAACTTTCCTTGCGATGGCTTACATCCTCTTCGTTAACCCGA ACATCCTTGGGGCAGCGGGTATGGATACAGGAGCGGTCTTCGTGGCGACAGGTCTTGTTGCAGTAGTCGGCTCATTGACG ATGGGACTTCTCGCGAACTACCCGATTGCGATTGCGCCAGGCATGGGCCTTAACGCGTTCTTCGCATATAGCGTCGTCAT CGGGATGGGTATTTCTTGGCAAACGGCTTTGTCAGGTGTACTTGTATCAGGTCTCTTCTTTATCGTATTGACGTTATCAG GAATTCGCGAAACGATTGTTAATGCGATTCCGGCTCCGCTCAAAATGGCGGTTGCTGCAGGGATTGGTTTCTTCATCGCT TTCATCGGTTTGAAAAACGCAGGCATCGTTGTCGCGAATGAAGCAACACTTGTTAGTCTTGGTTCGCTCGGAACGGGCAC GACGCTTCTCGCGGTGTTCGGTCTTGTGGTCAGCGCCTTGCTTATGGCGCGCGACATCAAAGGTGGTATTTTCATCGGGA TGTTGTTGACGGCGATTGTCGGGATGATCTTCGGTCTCGTGCCAACTCCGACAGCAATCTCAGACGTTGTATCCATGCCG CCGAGTATGTCATCTACATTCGGTCAAGCCTTCATCAACTTCGGTGATGTGTTCACGCTTCAAATGCTCGTTGTCATCTT GACGTTCTTCTTCATCGACTTCTTTGATACAGCTGGGACGCTCGTCGCGGTAGCGCGTCAAGCTGGGATCATGAAAGAGA ACAAAGTACCACGTGCGAGTAAGGCGTTGTTAGCTGACTCGACAGCGACGGTGGCAGGTGCAATCTTCGGAACATCTACA GCGACTTCATACGTTGAATCGTCAGCAGGTGTCGCTGCTGGTGGACGAACAGGATTGACTGCTGTTTTCGCAGGATTGTT CTTCGGTTTGGCATTGTTCTTCTCGCCTCTCTTGGCAGTTGTTACGGCGCCGGTCACAGCTCCTGCGCTGATTATTGTTG GTGTGCTCATGGCTTCGGCTCTTCTTGATATCGATTGGAAAAAGATCGAGATTGCAGTTCCTGCATTCTTGACGATTATC ATGATGCCACTTACATCATCAATCGCAACGGGAATTGGGCTTGGGTTTATCCTTTACCCACTCATGATGATTGCAAAAGG GAAGACGAAAGAGATTCATCCGATCATGTATGGGATGTTGGTCATCTTCTTGGCATACTTCATGTTCTTGCCACACGCAT AA
Upstream 100 bases:
>100_bases CATAGATGAGGGTGTATGCCCTCGTATGTTTCGCGTGGGGTCTTCGGTCATTTGCCGGGGACCTTTTCTCGTTTTACGGC GAGCACAAGGAGGAAAACAA
Downstream 100 bases:
>100_bases GTTCATTTGAAAAGCCGGCTCTATTATTACGAGTCGGCTTTTTTGTATGCAGTATTTTCAGGAAGGAATGGATCGTACAT CGTGATCGCGTGATTTTCTG
Product: Xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSTQLKQEQQQPSTTSRIDRYFQLTALGTSVRTELIAGFTTFLAMAYILFVNPNILGAAGMDTGAVFVATGLVAVVGSLT MGLLANYPIAIAPGMGLNAFFAYSVVIGMGISWQTALSGVLVSGLFFIVLTLSGIRETIVNAIPAPLKMAVAAGIGFFIA FIGLKNAGIVVANEATLVSLGSLGTGTTLLAVFGLVVSALLMARDIKGGIFIGMLLTAIVGMIFGLVPTPTAISDVVSMP PSMSSTFGQAFINFGDVFTLQMLVVILTFFFIDFFDTAGTLVAVARQAGIMKENKVPRASKALLADSTATVAGAIFGTST ATSYVESSAGVAAGGRTGLTAVFAGLFFGLALFFSPLLAVVTAPVTAPALIIVGVLMASALLDIDWKKIEIAVPAFLTII MMPLTSSIATGIGLGFILYPLMMIAKGKTKEIHPIMYGMLVIFLAYFMFLPHA
Sequences:
>Translated_453_residues MSTQLKQEQQQPSTTSRIDRYFQLTALGTSVRTELIAGFTTFLAMAYILFVNPNILGAAGMDTGAVFVATGLVAVVGSLT MGLLANYPIAIAPGMGLNAFFAYSVVIGMGISWQTALSGVLVSGLFFIVLTLSGIRETIVNAIPAPLKMAVAAGIGFFIA FIGLKNAGIVVANEATLVSLGSLGTGTTLLAVFGLVVSALLMARDIKGGIFIGMLLTAIVGMIFGLVPTPTAISDVVSMP PSMSSTFGQAFINFGDVFTLQMLVVILTFFFIDFFDTAGTLVAVARQAGIMKENKVPRASKALLADSTATVAGAIFGTST ATSYVESSAGVAAGGRTGLTAVFAGLFFGLALFFSPLLAVVTAPVTAPALIIVGVLMASALLDIDWKKIEIAVPAFLTII MMPLTSSIATGIGLGFILYPLMMIAKGKTKEIHPIMYGMLVIFLAYFMFLPHA >Mature_452_residues STQLKQEQQQPSTTSRIDRYFQLTALGTSVRTELIAGFTTFLAMAYILFVNPNILGAAGMDTGAVFVATGLVAVVGSLTM GLLANYPIAIAPGMGLNAFFAYSVVIGMGISWQTALSGVLVSGLFFIVLTLSGIRETIVNAIPAPLKMAVAAGIGFFIAF IGLKNAGIVVANEATLVSLGSLGTGTTLLAVFGLVVSALLMARDIKGGIFIGMLLTAIVGMIFGLVPTPTAISDVVSMPP SMSSTFGQAFINFGDVFTLQMLVVILTFFFIDFFDTAGTLVAVARQAGIMKENKVPRASKALLADSTATVAGAIFGTSTA TSYVESSAGVAAGGRTGLTAVFAGLFFGLALFFSPLLAVVTAPVTAPALIIVGVLMASALLDIDWKKIEIAVPAFLTIIM MPLTSSIATGIGLGFILYPLMMIAKGKTKEIHPIMYGMLVIFLAYFMFLPHA
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=429, Percent_Identity=45.2214452214452, Blast_Score=363, Evalue=1e-101, Organism=Escherichia coli, GI1790150, Length=446, Percent_Identity=43.7219730941704, Blast_Score=355, Evalue=2e-99, Organism=Escherichia coli, GI1790499, Length=442, Percent_Identity=37.5565610859729, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI48994909, Length=455, Percent_Identity=36.4835164835165, Blast_Score=224, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 47147; Mature: 47016
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLKQEQQQPSTTSRIDRYFQLTALGTSVRTELIAGFTTFLAMAYILFVNPNILGAAG CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC MDTGAVFVATGLVAVVGSLTMGLLANYPIAIAPGMGLNAFFAYSVVIGMGISWQTALSGV CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH LVSGLFFIVLTLSGIRETIVNAIPAPLKMAVAAGIGFFIAFIGLKNAGIVVANEATLVSL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE GSLGTGTTLLAVFGLVVSALLMARDIKGGIFIGMLLTAIVGMIFGLVPTPTAISDVVSMP CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC PSMSSTFGQAFINFGDVFTLQMLVVILTFFFIDFFDTAGTLVAVARQAGIMKENKVPRAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH KALLADSTATVAGAIFGTSTATSYVESSAGVAAGGRTGLTAVFAGLFFGLALFFSPLLAV HHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VTAPVTAPALIIVGVLMASALLDIDWKKIEIAVPAFLTIIMMPLTSSIATGIGLGFILYP HHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMMIAKGKTKEIHPIMYGMLVIFLAYFMFLPHA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STQLKQEQQQPSTTSRIDRYFQLTALGTSVRTELIAGFTTFLAMAYILFVNPNILGAAG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC MDTGAVFVATGLVAVVGSLTMGLLANYPIAIAPGMGLNAFFAYSVVIGMGISWQTALSGV CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH LVSGLFFIVLTLSGIRETIVNAIPAPLKMAVAAGIGFFIAFIGLKNAGIVVANEATLVSL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE GSLGTGTTLLAVFGLVVSALLMARDIKGGIFIGMLLTAIVGMIFGLVPTPTAISDVVSMP CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC PSMSSTFGQAFINFGDVFTLQMLVVILTFFFIDFFDTAGTLVAVARQAGIMKENKVPRAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH KALLADSTATVAGAIFGTSTATSYVESSAGVAAGGRTGLTAVFAGLFFGLALFFSPLLAV HHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VTAPVTAPALIIVGVLMASALLDIDWKKIEIAVPAFLTIIMMPLTSSIATGIGLGFILYP HHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMMIAKGKTKEIHPIMYGMLVIFLAYFMFLPHA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]