| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mtlD
Identifier: 229917925
GI number: 229917925
Start: 2137896
End: 2139044
Strand: Direct
Name: mtlD
Synonym: EAT1b_2204
Alternate gene names: 229917925
Gene position: 2137896-2139044 (Clockwise)
Preceding gene: 229917924
Following gene: 229917927
Centisome position: 71.27
GC content: 50.65
Gene sequence:
>1149_bases ATGAAAGCTGTTCACTTTGGGGCAGGGAACATCGGACGAGGCTTTATCGGATTATTGCTCAACCAAAGCGGTTACGAGGT GACGTTTGTCGACATCAATGACACGGTCATCGAAGCGCTTGAGGTAAAACGTCATTATGAGGTCGGGTTCGCAGAAGACG GCGTCGATCGTATCGTCGTCGACCGTGTTCGCGGTGTCAATAGTTTGAAAGAACCGGCTCGTGTCGTGGACTTGATTGCA GAAGCAGATCTCGTGACGACGGCTGTCGGACCGTCACTTCTCTCAAAAGTGGCACCGTTGATCAGCGAAGGACTTCGTGC TCGTGAAGTCGAGGATGCACCGGTCTATGTCATCGCATGTGAGAACATGATTGGTGGGAGTGCAATTCTTCGTCAAGAAG TAGAGGCGTGTGGCGGTGTCGGGGAGGCGAATGTCTTCTTCCCGAACGCGGCTGTCGACCGCATCGTCCCGCTACAACAA CATGAGGATCCACTTTACGTGGAAGTCGAGACGTTCCATGAATGGGTCATCGAGACACAAGGGCTCAACGAACAACCACC GATTCAAGGCGTGACGTGGGTCGAGGAGATCGGACCGTATATCGAACGGAAATTATTCACGGTCAATACAGGACACGCCA TCGCCTCTTATATCGGCTCGTTGTTCGGGAAGGCGACGATTGACGAGGCGCTGAAGGATCGTCGCGTGCGTCAAGTCGTC CAAGGAGCATTATATGAGACAGGTTGGTTATTGCTTGAGAAATACGGATTCGAGGCGAAAGAGCATAGCCAATACATTCA AAAAATCATCAAACGCTTTGAAAATCCGAAATTGAAGGATGAAGTGTCGCGTGTGGCCCGTTCACCGATTCGTAAACTTG GACCGAGCGACCGTCTCGTCAAGCCGGCACGTGAATTGATGGATAACGGCATCGAGCCGAACGAACTCGCTTACGGGATT GCAGCAGCCCTTCATTACTACAACCCGGAGGATTCGGAATCGTCGGAGCTGAACTTGTCGATCGAAGAACACGGCATCTC GTCAACGATTGAAAAATACCTTCATCTTCATGAAGGGGACACGTTGACTCAGTTGATTCTCGATCAATATCATTTGATTC GGGAAGAAGAAAAAGAACGTGTGTCTTAA
Upstream 100 bases:
>100_bases AATCGCGATTCTATGCTCAGACGAAAGCAATGTGGAGCGTCTTGTTCAGGCGAAAACGAAGGAAGAAATCTTGGCGCTCT TTATGGAAGAGGTGGCGTAA
Downstream 100 bases:
>100_bases TCAAAAATCGCTTCTGTCACCTGACAGAAGCGATTTTTTAGTGTTTCCCGAATTCGAGATAGGTCGTTGTTTGTTTTACG TGAAGTGGAACGTCTGTCTC
Product: Mannitol dehydrogenase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKAVHFGAGNIGRGFIGLLLNQSGYEVTFVDINDTVIEALEVKRHYEVGFAEDGVDRIVVDRVRGVNSLKEPARVVDLIA EADLVTTAVGPSLLSKVAPLISEGLRAREVEDAPVYVIACENMIGGSAILRQEVEACGGVGEANVFFPNAAVDRIVPLQQ HEDPLYVEVETFHEWVIETQGLNEQPPIQGVTWVEEIGPYIERKLFTVNTGHAIASYIGSLFGKATIDEALKDRRVRQVV QGALYETGWLLLEKYGFEAKEHSQYIQKIIKRFENPKLKDEVSRVARSPIRKLGPSDRLVKPARELMDNGIEPNELAYGI AAALHYYNPEDSESSELNLSIEEHGISSTIEKYLHLHEGDTLTQLILDQYHLIREEEKERVS
Sequences:
>Translated_382_residues MKAVHFGAGNIGRGFIGLLLNQSGYEVTFVDINDTVIEALEVKRHYEVGFAEDGVDRIVVDRVRGVNSLKEPARVVDLIA EADLVTTAVGPSLLSKVAPLISEGLRAREVEDAPVYVIACENMIGGSAILRQEVEACGGVGEANVFFPNAAVDRIVPLQQ HEDPLYVEVETFHEWVIETQGLNEQPPIQGVTWVEEIGPYIERKLFTVNTGHAIASYIGSLFGKATIDEALKDRRVRQVV QGALYETGWLLLEKYGFEAKEHSQYIQKIIKRFENPKLKDEVSRVARSPIRKLGPSDRLVKPARELMDNGIEPNELAYGI AAALHYYNPEDSESSELNLSIEEHGISSTIEKYLHLHEGDTLTQLILDQYHLIREEEKERVS >Mature_382_residues MKAVHFGAGNIGRGFIGLLLNQSGYEVTFVDINDTVIEALEVKRHYEVGFAEDGVDRIVVDRVRGVNSLKEPARVVDLIA EADLVTTAVGPSLLSKVAPLISEGLRAREVEDAPVYVIACENMIGGSAILRQEVEACGGVGEANVFFPNAAVDRIVPLQQ HEDPLYVEVETFHEWVIETQGLNEQPPIQGVTWVEEIGPYIERKLFTVNTGHAIASYIGSLFGKATIDEALKDRRVRQVV QGALYETGWLLLEKYGFEAKEHSQYIQKIIKRFENPKLKDEVSRVARSPIRKLGPSDRLVKPARELMDNGIEPNELAYGI AAALHYYNPEDSESSELNLSIEEHGISSTIEKYLHLHEGDTLTQLILDQYHLIREEEKERVS
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1790028, Length=366, Percent_Identity=45.0819672131148, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI1788497, Length=257, Percent_Identity=27.2373540856031, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1787823, Length=264, Percent_Identity=26.5151515151515, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790779, Length=212, Percent_Identity=28.3018867924528, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324401, Length=197, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320765, Length=197, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTLD_EXISA (C4L274)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886571.1 - ProteinModelPortal: C4L274 - GeneID: 7869592 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_2204 - OMA: FTVNTGH - ProtClustDB: CLSK2489393 - HAMAP: MF_00196 - InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR023028 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:1.10.1040.10 - PRINTS: PR00084
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C; SSF48179 6DGDH_C_like
EC number: =1.1.1.17
Molecular weight: Translated: 42640; Mature: 42640
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVHFGAGNIGRGFIGLLLNQSGYEVTFVDINDTVIEALEVKRHYEVGFAEDGVDRIVV CCEEEECCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHH DRVRGVNSLKEPARVVDLIAEADLVTTAVGPSLLSKVAPLISEGLRAREVEDAPVYVIAC HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEE ENMIGGSAILRQEVEACGGVGEANVFFPNAAVDRIVPLQQHEDPLYVEVETFHEWVIETQ CCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHC GLNEQPPIQGVTWVEEIGPYIERKLFTVNTGHAIASYIGSLFGKATIDEALKDRRVRQVV CCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGALYETGWLLLEKYGFEAKEHSQYIQKIIKRFENPKLKDEVSRVARSPIRKLGPSDRLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH KPARELMDNGIEPNELAYGIAAALHYYNPEDSESSELNLSIEEHGISSTIEKYLHLHEGD HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCC TLTQLILDQYHLIREEEKERVS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAVHFGAGNIGRGFIGLLLNQSGYEVTFVDINDTVIEALEVKRHYEVGFAEDGVDRIVV CCEEEECCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHH DRVRGVNSLKEPARVVDLIAEADLVTTAVGPSLLSKVAPLISEGLRAREVEDAPVYVIAC HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEE ENMIGGSAILRQEVEACGGVGEANVFFPNAAVDRIVPLQQHEDPLYVEVETFHEWVIETQ CCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCCHHCCCCCEEEEHHHHHHHHHHHC GLNEQPPIQGVTWVEEIGPYIERKLFTVNTGHAIASYIGSLFGKATIDEALKDRRVRQVV CCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGALYETGWLLLEKYGFEAKEHSQYIQKIIKRFENPKLKDEVSRVARSPIRKLGPSDRLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH KPARELMDNGIEPNELAYGIAAALHYYNPEDSESSELNLSIEEHGISSTIEKYLHLHEGD HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCC TLTQLILDQYHLIREEEKERVS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA