| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917927
Identifier: 229917927
GI number: 229917927
Start: 2141515
End: 2142396
Strand: Direct
Name: 229917927
Synonym: EAT1b_2206
Alternate gene names: NA
Gene position: 2141515-2142396 (Clockwise)
Preceding gene: 229917925
Following gene: 229917928
Centisome position: 71.39
GC content: 46.37
Gene sequence:
>882_bases ATGCTCTTCTTCCTATCAAATAACGGGTACTACATTGCTGAAGGGGTGCTGATTATGTATAAAAACAAATACATCAACTT TTTCTTATTGGTCTCATTCGGCTATTCATGGTTCATATGGGGAAGCTTGTACTGGTGGACCGATTTGCCAATCATGGCCA TCGTTATTTTAGGGGCATTTGGTCCAAGCATTGCAGGGTTTCTCACGATGTATCGACTCCGGGGCGGCGTAGGGGTGACA CATCTTCTTCGGAAAAGCATTCAGTTCCAGATGAGTTGGAAGGCGTATGCGATTCCCTTTTTGTTGGTGCCGTTCTTATT TCTCGTGGCGTATTGGTGGACTGATCGAAGCGGTGCCCTACTCGTTCGCGAACCGTGGTGGATTGTCCCATACTTCTTCT ATATGCTAATTCTCGGTGGGACGTTGCAGGAAGAGTATGGATGGCGCGGGTATTTGCTGGACGCCTTACAATCAAGACTC TCTCCACTTCTAGCCAGCTTGTCACTCGGAGTCATTTGGGCGATGTGGCATATTCCTCTTTTCTTCATGGCTGGAACAGG ACAGGCGAATTTGTCATTTTGGGCGTATGGGTTAGCCGTGATGGCATATACGATCCTCATGACTTGGGTATACAACGGGT CGTCGCGCAATTTATGGTCGGCCTTTCTCATGCATATGATGTTTAATGTCATGCTCGTGATGGTCGGGTTTGAAGCGGAA AGTGGTTATCCAATCGGATTTATTCATTTGACAATCACATTATGGACCGCCGCGATTTTAGTCATTTGGAAAACGTACGG TAAATTGAATTATGAGCCGCTCGAAGAAATGATTCCCTCGTACCCGAGTGTTACGCAACGAATTCGTGAGGGTAAAGAGT AA
Upstream 100 bases:
>100_bases TGCTAATCTGTTCCATAATGTCGATACCTCACAGGGTTTTTAATGTAGAGTTCACTTCATTATATGCGGAACTCTCAAAA TTACATAATAAAAAATTCAA
Downstream 100 bases:
>100_bases AACAAAAAAGAAAAGGGAGTGGCCGTCTTGAATTTTCGCGCACTCGAACAATCAGACGTGAAATCCTTGCAGCGCTTATT TATGGAGAGTTTGAGTGACT
Product: Abortive infection protein
Products: NA
Alternate protein names: Methyltransferase Type; CAAX Amino Terminal Protease Family
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLFFLSNNGYYIAEGVLIMYKNKYINFFLLVSFGYSWFIWGSLYWWTDLPIMAIVILGAFGPSIAGFLTMYRLRGGVGVT HLLRKSIQFQMSWKAYAIPFLLVPFLFLVAYWWTDRSGALLVREPWWIVPYFFYMLILGGTLQEEYGWRGYLLDALQSRL SPLLASLSLGVIWAMWHIPLFFMAGTGQANLSFWAYGLAVMAYTILMTWVYNGSSRNLWSAFLMHMMFNVMLVMVGFEAE SGYPIGFIHLTITLWTAAILVIWKTYGKLNYEPLEEMIPSYPSVTQRIREGKE
Sequences:
>Translated_293_residues MLFFLSNNGYYIAEGVLIMYKNKYINFFLLVSFGYSWFIWGSLYWWTDLPIMAIVILGAFGPSIAGFLTMYRLRGGVGVT HLLRKSIQFQMSWKAYAIPFLLVPFLFLVAYWWTDRSGALLVREPWWIVPYFFYMLILGGTLQEEYGWRGYLLDALQSRL SPLLASLSLGVIWAMWHIPLFFMAGTGQANLSFWAYGLAVMAYTILMTWVYNGSSRNLWSAFLMHMMFNVMLVMVGFEAE SGYPIGFIHLTITLWTAAILVIWKTYGKLNYEPLEEMIPSYPSVTQRIREGKE >Mature_293_residues MLFFLSNNGYYIAEGVLIMYKNKYINFFLLVSFGYSWFIWGSLYWWTDLPIMAIVILGAFGPSIAGFLTMYRLRGGVGVT HLLRKSIQFQMSWKAYAIPFLLVPFLFLVAYWWTDRSGALLVREPWWIVPYFFYMLILGGTLQEEYGWRGYLLDALQSRL SPLLASLSLGVIWAMWHIPLFFMAGTGQANLSFWAYGLAVMAYTILMTWVYNGSSRNLWSAFLMHMMFNVMLVMVGFEAE SGYPIGFIHLTITLWTAAILVIWKTYGKLNYEPLEEMIPSYPSVTQRIREGKE
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34003; Mature: 34003
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFLSNNGYYIAEGVLIMYKNKYINFFLLVSFGYSWFIWGSLYWWTDLPIMAIVILGAF CEEEEECCCEEEECCEEEEEECCHHEEEEEEHHCCCEEECCCCHHHHHHHHHHHHHHHHC GPSIAGFLTMYRLRGGVGVTHLLRKSIQFQMSWKAYAIPFLLVPFLFLVAYWWTDRSGAL CHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCEE LVREPWWIVPYFFYMLILGGTLQEEYGWRGYLLDALQSRLSPLLASLSLGVIWAMWHIPL EEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFMAGTGQANLSFWAYGLAVMAYTILMTWVYNGSSRNLWSAFLMHMMFNVMLVMVGFEAE HEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC SGYPIGFIHLTITLWTAAILVIWKTYGKLNYEPLEEMIPSYPSVTQRIREGKE CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure MLFFLSNNGYYIAEGVLIMYKNKYINFFLLVSFGYSWFIWGSLYWWTDLPIMAIVILGAF CEEEEECCCEEEECCEEEEEECCHHEEEEEEHHCCCEEECCCCHHHHHHHHHHHHHHHHC GPSIAGFLTMYRLRGGVGVTHLLRKSIQFQMSWKAYAIPFLLVPFLFLVAYWWTDRSGAL CHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCEE LVREPWWIVPYFFYMLILGGTLQEEYGWRGYLLDALQSRLSPLLASLSLGVIWAMWHIPL EEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFMAGTGQANLSFWAYGLAVMAYTILMTWVYNGSSRNLWSAFLMHMMFNVMLVMVGFEAE HEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC SGYPIGFIHLTITLWTAAILVIWKTYGKLNYEPLEEMIPSYPSVTQRIREGKE CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA