| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is bglB [H]
Identifier: 229917905
GI number: 229917905
Start: 2120265
End: 2121617
Strand: Direct
Name: bglB [H]
Synonym: EAT1b_2183
Alternate gene names: 229917905
Gene position: 2120265-2121617 (Clockwise)
Preceding gene: 229917904
Following gene: 229917906
Centisome position: 70.68
GC content: 51.52
Gene sequence:
>1353_bases ATGCATTTTAAGAAAGACTTCGTATTCGGGACAGCCACGTCCTCGTACCAAATTGAAGGCGCACATAACGAAGGAGGCCG TACTCCTTCCATCTGGGATATGTTCTGTGACATCGACGGGCGCGTGTTTGAAAAGCATAACGGCGATGTCGCATGTGACC ACTACCATCGTTACGAAGAAGACATTAAGCACATCAAAAAGCTAGGTGTCGACACGTATCGATTCTCCATCGCGTGGCCA CGAATCTTCCCTGCCAAGGGAGAGTACAACCCAGAAGGGATGGCGTTCTACAAAAACTTGGCGCTGTGTCTCCGTGAAGA AGGAATCAAACCAGCCGTCACCATTTATCACTGGGACCTTCCGATGTGGGCTCACGAAGAAGGTGGCTGGGTCAACCGTG AATCGGTCGACTGGTTCCTCGATTATGCGAAAGTCTGTTTTGAAGAGCTCGATGACATCGTCGACTCTTGGATCACTCAC AATGAGCCTTGGTGTGCCGGCTTCCTCGGCTATCACGTCGGTGTTCACGCACCGGGTCATCGTGATATGAACGAAGCGGT GCGCGCCGTGCACCATATCTTGTTGTCGCACGGAAAAGCGGTCGAGTTGTTGAAGCGAGAGATGACGTCCACGACCCCGA TCGGCATCACGCTCAACTTATCACCGATGTACGCGAAGACGGATTCGGCGAATGACCGCCTTGCGATGAACAATGCCGAC GGGTATTCGAATCGCTGGTTCCTCGATCCGGTCTTCAAAGGTGAGTATCCGGTCGACATGATGAACTTGTTCTCCAAATA TGTGCATAACTTTGATTTCATCCAACCGGGTGATATGGAGACAATCTCGACAGCTTGCGATTTCTTCGGTATCAATTTCT ACAGCCGTGGCATTGTCGAGTTTAACGCAGCAAATGATTTCTTGAAGGCAGACGCTTACTCGGACTACGAGAAGACGGGC ATGGGTTGGGATATCGCCCCGAACGAATTCAAAGACCTGATCCGTCGTTTACGCGCCGAGTATACTGACCTTCCGATCTA CATCACAGAGAACGGCGCCGCATTTGACGACGTGCTGGAAAATGGCGAAGTCCATGACGATAACCGGATCGACTACGTCC GCCAGCACCTCGAAGCCGTCTCCGATTTGAACGATGAGGGCATGAACATTCAAGGCTACTACCTCTGGTCGCTCATGGAT AACTTCGAATGGAGCTTCGGATATGAGAAGCGTTTTGGCATCCTCTATATCGACTTTGAGACACAGGAGCGCATCTGGAA AGACAGCGCGAAGTGGTATGCCGGTGTCATCGCCGACCATAAAGCCAAACACGCGGATAGCGTCGAGGCGTAA
Upstream 100 bases:
>100_bases ACCGATTATGATTGCCTTCTTGTTCCTCTCGAAGTACATCGTCAGCAGTATTTCGGCAGGTGCTGTCAAAGAATAAATAT AGAGAAAAGAGGAAAACACT
Downstream 100 bases:
>100_bases TATGCATCCATCCCCACCGCTACGGGGATGGATTTTTTGTGTGGAATGCTATCTTTTTGGGAACGAGGATAGGGGAGGGA TGTTCTATGAAACGCGAGTT
Product: beta-galactosidase
Products: NA
Alternate protein names: Amygdalase; Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MHFKKDFVFGTATSSYQIEGAHNEGGRTPSIWDMFCDIDGRVFEKHNGDVACDHYHRYEEDIKHIKKLGVDTYRFSIAWP RIFPAKGEYNPEGMAFYKNLALCLREEGIKPAVTIYHWDLPMWAHEEGGWVNRESVDWFLDYAKVCFEELDDIVDSWITH NEPWCAGFLGYHVGVHAPGHRDMNEAVRAVHHILLSHGKAVELLKREMTSTTPIGITLNLSPMYAKTDSANDRLAMNNAD GYSNRWFLDPVFKGEYPVDMMNLFSKYVHNFDFIQPGDMETISTACDFFGINFYSRGIVEFNAANDFLKADAYSDYEKTG MGWDIAPNEFKDLIRRLRAEYTDLPIYITENGAAFDDVLENGEVHDDNRIDYVRQHLEAVSDLNDEGMNIQGYYLWSLMD NFEWSFGYEKRFGILYIDFETQERIWKDSAKWYAGVIADHKAKHADSVEA
Sequences:
>Translated_450_residues MHFKKDFVFGTATSSYQIEGAHNEGGRTPSIWDMFCDIDGRVFEKHNGDVACDHYHRYEEDIKHIKKLGVDTYRFSIAWP RIFPAKGEYNPEGMAFYKNLALCLREEGIKPAVTIYHWDLPMWAHEEGGWVNRESVDWFLDYAKVCFEELDDIVDSWITH NEPWCAGFLGYHVGVHAPGHRDMNEAVRAVHHILLSHGKAVELLKREMTSTTPIGITLNLSPMYAKTDSANDRLAMNNAD GYSNRWFLDPVFKGEYPVDMMNLFSKYVHNFDFIQPGDMETISTACDFFGINFYSRGIVEFNAANDFLKADAYSDYEKTG MGWDIAPNEFKDLIRRLRAEYTDLPIYITENGAAFDDVLENGEVHDDNRIDYVRQHLEAVSDLNDEGMNIQGYYLWSLMD NFEWSFGYEKRFGILYIDFETQERIWKDSAKWYAGVIADHKAKHADSVEA >Mature_450_residues MHFKKDFVFGTATSSYQIEGAHNEGGRTPSIWDMFCDIDGRVFEKHNGDVACDHYHRYEEDIKHIKKLGVDTYRFSIAWP RIFPAKGEYNPEGMAFYKNLALCLREEGIKPAVTIYHWDLPMWAHEEGGWVNRESVDWFLDYAKVCFEELDDIVDSWITH NEPWCAGFLGYHVGVHAPGHRDMNEAVRAVHHILLSHGKAVELLKREMTSTTPIGITLNLSPMYAKTDSANDRLAMNNAD GYSNRWFLDPVFKGEYPVDMMNLFSKYVHNFDFIQPGDMETISTACDFFGINFYSRGIVEFNAANDFLKADAYSDYEKTG MGWDIAPNEFKDLIRRLRAEYTDLPIYITENGAAFDDVLENGEVHDDNRIDYVRQHLEAVSDLNDEGMNIQGYYLWSLMD NFEWSFGYEKRFGILYIDFETQERIWKDSAKWYAGVIADHKAKHADSVEA
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=467, Percent_Identity=34.475374732334, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI110681710, Length=481, Percent_Identity=31.3929313929314, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13273313, Length=468, Percent_Identity=30.3418803418803, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI28376633, Length=449, Percent_Identity=29.6213808463252, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI24497614, Length=462, Percent_Identity=30.5194805194805, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI190360571, Length=85, Percent_Identity=45.8823529411765, Blast_Score=86, Evalue=5e-17, Organism=Escherichia coli, GI2367174, Length=485, Percent_Identity=30.1030927835052, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1789070, Length=478, Percent_Identity=29.4979079497908, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI2367270, Length=467, Percent_Identity=32.1199143468951, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552856, Length=476, Percent_Identity=34.453781512605, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17539390, Length=475, Percent_Identity=33.4736842105263, Blast_Score=234, Evalue=6e-62, Organism=Drosophila melanogaster, GI21356577, Length=454, Percent_Identity=34.1409691629956, Blast_Score=239, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 52107; Mature: 52107
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKKDFVFGTATSSYQIEGAHNEGGRTPSIWDMFCDIDGRVFEKHNGDVACDHYHRYEE CCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHEECCCCEEEECCCCCEEEHHHHHHHH DIKHIKKLGVDTYRFSIAWPRIFPAKGEYNPEGMAFYKNLALCLREEGIKPAVTIYHWDL HHHHHHHCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC PMWAHEEGGWVNRESVDWFLDYAKVCFEELDDIVDSWITHNEPWCAGFLGYHVGVHAPGH CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCC RDMNEAVRAVHHILLSHGKAVELLKREMTSTTPIGITLNLSPMYAKTDSANDRLAMNNAD CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEECCCC GYSNRWFLDPVFKGEYPVDMMNLFSKYVHNFDFIQPGDMETISTACDFFGINFYSRGIVE CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCEEE FNAANDFLKADAYSDYEKTGMGWDIAPNEFKDLIRRLRAEYTDLPIYITENGAAFDDVLE EECCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHC NGEVHDDNRIDYVRQHLEAVSDLNDEGMNIQGYYLWSLMDNFEWSFGYEKRFGILYIDFE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEEEC TQERIWKDSAKWYAGVIADHKAKHADSVEA HHHHHHHHCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHFKKDFVFGTATSSYQIEGAHNEGGRTPSIWDMFCDIDGRVFEKHNGDVACDHYHRYEE CCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHEECCCCEEEECCCCCEEEHHHHHHHH DIKHIKKLGVDTYRFSIAWPRIFPAKGEYNPEGMAFYKNLALCLREEGIKPAVTIYHWDL HHHHHHHCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC PMWAHEEGGWVNRESVDWFLDYAKVCFEELDDIVDSWITHNEPWCAGFLGYHVGVHAPGH CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCC RDMNEAVRAVHHILLSHGKAVELLKREMTSTTPIGITLNLSPMYAKTDSANDRLAMNNAD CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCEEEECCCC GYSNRWFLDPVFKGEYPVDMMNLFSKYVHNFDFIQPGDMETISTACDFFGINFYSRGIVE CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCEEE FNAANDFLKADAYSDYEKTGMGWDIAPNEFKDLIRRLRAEYTDLPIYITENGAAFDDVLE EECCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHC NGEVHDDNRIDYVRQHLEAVSDLNDEGMNIQGYYLWSLMDNFEWSFGYEKRFGILYIDFE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEEEC TQERIWKDSAKWYAGVIADHKAKHADSVEA HHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123813 [H]