| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917844
Identifier: 229917844
GI number: 229917844
Start: 2071422
End: 2072708
Strand: Direct
Name: 229917844
Synonym: EAT1b_2122
Alternate gene names: NA
Gene position: 2071422-2072708 (Clockwise)
Preceding gene: 229917843
Following gene: 229917846
Centisome position: 69.05
GC content: 36.44
Gene sequence:
>1287_bases TTGCAGGAAGCGATGTATGAGGGAAAGAACGTAAATTTATCAGTTTTATTAGATGAAAAGCGAGAAATTCGTGAACTGAA AAAAAGTTCGGATAAAGGGGCGTTTAGCTGCCCGTATTGTAATGAAACGCTTATCATAAGGGCCGGGAGTGATCGGGTTC ACCACTTCTCTCACAAGCAATCAAAGTCATGTGAACTTTCTATTGAAAGTGACAAGTACCAGGATCAGATTAAAAGAGAG TCAAAACAGCATTCGGTTATAAAGAACTTTATTCATGATGAACTGAAAGCTCAACAAAAAATAAATAAGGAACTCGAAGT TGAATACGGTTTTGTTGCAAAAGCGACTGAAAAGTGGCGTTACTATCCTGATATTATCGTAAAAAATGTGGATAAAGAAA TTGCGATTACGGTGCTTACCAATGTGACACAAAATCGAGATGAAAAATTGGCTAATCAAATTATTAAACGGAATACATAC TTCAAAGAAAAGGGACTTATCCCGATTTGGTTCGTTGAAAATACAGAACAGTCGATTGATTTAGGTCGTCATGTAATCCA CCTTTGGGAAGCTGAGTTAAATCTGGCGATGAAAACTCCTGAAGATTTAATGTGGGAAACATTATTGAATGAAACAGCGC GTGATCAATCCTTATTCGAACTATTTGATTATCATCATCAAAATACTCCGGATTCTTATAAGGTTCGAAGCCTTTACTAT ATCCAATCTAGAGAAGATAGTATCCAATTCTCTGTTCGACGCTTTGTTGAAGATGAGCAAAAAAGTCCATTCCGAGCATT TGCGTTAAACGGAGGATATGAAATCAGTCTATCTACTGCCTTGTTGACTACTCAAACATTACAACTAAGCGATCCTAAAA TCGAAATGCAGCTAAGAGATTCCTTTCTACAAGAATTGAAGCAGAAGAAAAATGAATATATAGCGAAACAAAAAGAAATC GCAGACGCAAATAGAGCTGAATTACTAAACAAGCGTTACGATTCATCAAAACTCCAAGTAAGCTCAAAGAATTTGCTAAC AAAAAGTCATTTTCGAACGGCAATTTTGGAATATATCAAAACTGGTAGGTTAAGATTGATTAATGCTGACGATGTAGCAG AGTATCTAGTGCTCAACGGTGCTTCAAATAAGTCTTACAATACAGGACGCTACAAAATTTACTCCGATGTCTGTGTTTGT CTTGATCAATTAGCCGAAGAGAATGTAATTGAACTTTCGTCAACAGGCGGGCAACGAGATAGAACGTATGCTGTAAAAAC TATATAA
Upstream 100 bases:
>100_bases TATTTTTAAAACACTCTATATGTTATATAATGGAATTAATAAAATTTAAAAGTAATATAATGTATTTTGTTAATTCGTTT TAACTAGGGAGGAATTGATT
Downstream 100 bases:
>100_bases AATCATTAAAATGCCTAAAAAGAGCAAAGTATCGAGTAGAATCCAGAATGGCACTTTTGATAACAGGTTGTATGCGTTCG AAGGTATTAAATGAAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MQEAMYEGKNVNLSVLLDEKREIRELKKSSDKGAFSCPYCNETLIIRAGSDRVHHFSHKQSKSCELSIESDKYQDQIKRE SKQHSVIKNFIHDELKAQQKINKELEVEYGFVAKATEKWRYYPDIIVKNVDKEIAITVLTNVTQNRDEKLANQIIKRNTY FKEKGLIPIWFVENTEQSIDLGRHVIHLWEAELNLAMKTPEDLMWETLLNETARDQSLFELFDYHHQNTPDSYKVRSLYY IQSREDSIQFSVRRFVEDEQKSPFRAFALNGGYEISLSTALLTTQTLQLSDPKIEMQLRDSFLQELKQKKNEYIAKQKEI ADANRAELLNKRYDSSKLQVSSKNLLTKSHFRTAILEYIKTGRLRLINADDVAEYLVLNGASNKSYNTGRYKIYSDVCVC LDQLAEENVIELSSTGGQRDRTYAVKTI
Sequences:
>Translated_428_residues MQEAMYEGKNVNLSVLLDEKREIRELKKSSDKGAFSCPYCNETLIIRAGSDRVHHFSHKQSKSCELSIESDKYQDQIKRE SKQHSVIKNFIHDELKAQQKINKELEVEYGFVAKATEKWRYYPDIIVKNVDKEIAITVLTNVTQNRDEKLANQIIKRNTY FKEKGLIPIWFVENTEQSIDLGRHVIHLWEAELNLAMKTPEDLMWETLLNETARDQSLFELFDYHHQNTPDSYKVRSLYY IQSREDSIQFSVRRFVEDEQKSPFRAFALNGGYEISLSTALLTTQTLQLSDPKIEMQLRDSFLQELKQKKNEYIAKQKEI ADANRAELLNKRYDSSKLQVSSKNLLTKSHFRTAILEYIKTGRLRLINADDVAEYLVLNGASNKSYNTGRYKIYSDVCVC LDQLAEENVIELSSTGGQRDRTYAVKTI >Mature_428_residues MQEAMYEGKNVNLSVLLDEKREIRELKKSSDKGAFSCPYCNETLIIRAGSDRVHHFSHKQSKSCELSIESDKYQDQIKRE SKQHSVIKNFIHDELKAQQKINKELEVEYGFVAKATEKWRYYPDIIVKNVDKEIAITVLTNVTQNRDEKLANQIIKRNTY FKEKGLIPIWFVENTEQSIDLGRHVIHLWEAELNLAMKTPEDLMWETLLNETARDQSLFELFDYHHQNTPDSYKVRSLYY IQSREDSIQFSVRRFVEDEQKSPFRAFALNGGYEISLSTALLTTQTLQLSDPKIEMQLRDSFLQELKQKKNEYIAKQKEI ADANRAELLNKRYDSSKLQVSSKNLLTKSHFRTAILEYIKTGRLRLINADDVAEYLVLNGASNKSYNTGRYKIYSDVCVC LDQLAEENVIELSSTGGQRDRTYAVKTI
Specific function: Unknown
COG id: COG4469
COG function: function code R; Competence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49858; Mature: 49858
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEAMYEGKNVNLSVLLDEKREIRELKKSSDKGAFSCPYCNETLIIRAGSDRVHHFSHKQ CCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCHHHHHHCCC SKSCELSIESDKYQDQIKRESKQHSVIKNFIHDELKAQQKINKELEVEYGFVAKATEKWR CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECEEEHHHHCCC YYPDIIVKNVDKEIAITVLTNVTQNRDEKLANQIIKRNTYFKEKGLIPIWFVENTEQSID CCCHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHH LGRHVIHLWEAELNLAMKTPEDLMWETLLNETARDQSLFELFDYHHQNTPDSYKVRSLYY HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEEEE IQSREDSIQFSVRRFVEDEQKSPFRAFALNGGYEISLSTALLTTQTLQLSDPKIEMQLRD EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEEEEEECCCCCHHHHHH SFLQELKQKKNEYIAKQKEIADANRAELLNKRYDSSKLQVSSKNLLTKSHFRTAILEYIK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHH TGRLRLINADDVAEYLVLNGASNKSYNTGRYKIYSDVCVCLDQLAEENVIELSSTGGQRD CCCEEEEEHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCC RTYAVKTI CEEEEECC >Mature Secondary Structure MQEAMYEGKNVNLSVLLDEKREIRELKKSSDKGAFSCPYCNETLIIRAGSDRVHHFSHKQ CCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCHHHHHHCCC SKSCELSIESDKYQDQIKRESKQHSVIKNFIHDELKAQQKINKELEVEYGFVAKATEKWR CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECEEEHHHHCCC YYPDIIVKNVDKEIAITVLTNVTQNRDEKLANQIIKRNTYFKEKGLIPIWFVENTEQSID CCCHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCHHHH LGRHVIHLWEAELNLAMKTPEDLMWETLLNETARDQSLFELFDYHHQNTPDSYKVRSLYY HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEEEE IQSREDSIQFSVRRFVEDEQKSPFRAFALNGGYEISLSTALLTTQTLQLSDPKIEMQLRD EECCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEEEEEECCCCCHHHHHH SFLQELKQKKNEYIAKQKEIADANRAELLNKRYDSSKLQVSSKNLLTKSHFRTAILEYIK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHH TGRLRLINADDVAEYLVLNGASNKSYNTGRYKIYSDVCVCLDQLAEENVIELSSTGGQRD CCCEEEEEHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCC RTYAVKTI CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA