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The map label for this gene is yxlJ [H]

Identifier: 229917718

GI number: 229917718

Start: 1950666

End: 1951250

Strand: Direct

Name: yxlJ [H]

Synonym: EAT1b_1995

Alternate gene names: 229917718

Gene position: 1950666-1951250 (Clockwise)

Preceding gene: 229917717

Following gene: 229917719

Centisome position: 65.02

GC content: 54.36

Gene sequence:

>585_bases
ATGAAGCGACTCGAGTTAGCATTTTATGAACAACCGACACTTGACTTGGCGCGTGCCTTACTCGGGCAATATTTGGTGAG
GCGACATCCAGAAGGTGACATCATCGCGAAGATTGTCGAGACGGAAGCTTACCTCGGTGCCATCGACCGAGCAGCGCATA
GCTTCGGAGGGCGTCGGACGAAGCGAACGGAAGTCATGTTTGGGAAACCGGGGCATGTGTACACCTATCAGATGCATACG
CACACGCTCCTGAACGTAGTCAGCGGTCCGGTCGGTACTCCGGAAGCCGTGCTGATTCGAGCCGTCGAACCGATTCAAGG
ACATGAATGGATTGCTTCGAACCGTCCTGGGGTGAAACGATATGACCAGACGAACGGACCAGGGAAGTTGACGAAAGCAC
TCGGAATCACAATGGATTTATACGGCCATTCCTTTCAACAAGACCCACTCTACATCGCGGAGGGTGAGGCAGGAGTAGTA
ATTGAGGCGGGTCCCCGTATCGGGATCCCGAACACGGGCGAGGCACGTGACTACCCGTATCGCTTCTTTGAACGCGACAA
TCCGTACGTCTCGAAGTTCCGTTGA

Upstream 100 bases:

>100_bases
AAAAATCGCATCATAACGTCCAGGTGTCCTGCCATGCAGGGCATCTTTTTTGTGTGCAAGCTACGATTTTTGAGAAAATG
AAACAAATGGAGGTGGAACG

Downstream 100 bases:

>100_bases
ACGCCACTTGAGATGTTTAACTGATTCATGCCAGTGGAACAGTCCTTATGTGCATAAAACAAACAGAGGGAGTGTTTAGA
ACATGGCAAAAGTAGCAACG

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKRLELAFYEQPTLDLARALLGQYLVRRHPEGDIIAKIVETEAYLGAIDRAAHSFGGRRTKRTEVMFGKPGHVYTYQMHT
HTLLNVVSGPVGTPEAVLIRAVEPIQGHEWIASNRPGVKRYDQTNGPGKLTKALGITMDLYGHSFQQDPLYIAEGEAGVV
IEAGPRIGIPNTGEARDYPYRFFERDNPYVSKFR

Sequences:

>Translated_194_residues
MKRLELAFYEQPTLDLARALLGQYLVRRHPEGDIIAKIVETEAYLGAIDRAAHSFGGRRTKRTEVMFGKPGHVYTYQMHT
HTLLNVVSGPVGTPEAVLIRAVEPIQGHEWIASNRPGVKRYDQTNGPGKLTKALGITMDLYGHSFQQDPLYIAEGEAGVV
IEAGPRIGIPNTGEARDYPYRFFERDNPYVSKFR
>Mature_194_residues
MKRLELAFYEQPTLDLARALLGQYLVRRHPEGDIIAKIVETEAYLGAIDRAAHSFGGRRTKRTEVMFGKPGHVYTYQMHT
HTLLNVVSGPVGTPEAVLIRAVEPIQGHEWIASNRPGVKRYDQTNGPGKLTKALGITMDLYGHSFQQDPLYIAEGEAGVV
IEAGPRIGIPNTGEARDYPYRFFERDNPYVSKFR

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family [H]

Homologues:

Organism=Homo sapiens, GI62632769, Length=214, Percent_Identity=40.1869158878505, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI62632765, Length=214, Percent_Identity=40.1869158878505, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI62632771, Length=214, Percent_Identity=40.1869158878505, Blast_Score=115, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011034
- InterPro:   IPR003180 [H]

Pfam domain/function: PF02245 Pur_DNA_glyco [H]

EC number: 3.2.2.-

Molecular weight: Translated: 21768; Mature: 21768

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLELAFYEQPTLDLARALLGQYLVRRHPEGDIIAKIVETEAYLGAIDRAAHSFGGRRT
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KRTEVMFGKPGHVYTYQMHTHTLLNVVSGPVGTPEAVLIRAVEPIQGHEWIASNRPGVKR
CCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCC
YDQTNGPGKLTKALGITMDLYGHSFQQDPLYIAEGEAGVVIEAGPRIGIPNTGEARDYPY
CCCCCCCCHHHHHHCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
RFFERDNPYVSKFR
CEECCCCCCCCCCC
>Mature Secondary Structure
MKRLELAFYEQPTLDLARALLGQYLVRRHPEGDIIAKIVETEAYLGAIDRAAHSFGGRRT
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KRTEVMFGKPGHVYTYQMHTHTLLNVVSGPVGTPEAVLIRAVEPIQGHEWIASNRPGVKR
CCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCC
YDQTNGPGKLTKALGITMDLYGHSFQQDPLYIAEGEAGVVIEAGPRIGIPNTGEARDYPY
CCCCCCCCHHHHHHCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
RFFERDNPYVSKFR
CEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]