| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is gmuB [H]
Identifier: 229917608
GI number: 229917608
Start: 1850454
End: 1850750
Strand: Direct
Name: gmuB [H]
Synonym: EAT1b_1883
Alternate gene names: 229917608
Gene position: 1850454-1850750 (Clockwise)
Preceding gene: 229917604
Following gene: 229917609
Centisome position: 61.68
GC content: 43.77
Gene sequence:
>297_bases ATGAAGAAAATCTTATTAGCGTGTAGTTCAGGGATGTCGACGAGTTTACTCGTAACAAAGATGAAAGATCATGCCACATC AATCGGGGATGAGGCGAAGATTTGGGCAGTCGGTCAAGATCAAGTCGTAACGGAGATGGACGAGGCAGATGTGATTTTGA TTGGTCCACAAATGCGTTTCTTGTTGGATAAATTGAAAGCGCAAACATCAACACCGATTGAAGTGATCGATATGATGGCA TACGGCACGGCGAATGGAAAAGCTGCATACGAACAAGCGATGAAATTAATGGGGTGA
Upstream 100 bases:
>100_bases GAATTTAAAAACTAAACAAAGTTTAAATCAAGTATAGACATGAAATTAATCATGTGTATAATAAAACATGTAACCGATTT CAAATAAGGAGTGAGGACAC
Downstream 100 bases:
>100_bases ACAACGTGGAACAGGTAGACGAGTTAACCTTGGAGCAAATGGCATTCATGATGATTTTGCACAGTGGCAATGCGAGAAGT ACGATTCAGGAAGCGATTCA
Product: phosphotransferase system lactose/cellobiose-specific IIB subunit
Products: NA
Alternate protein names: Glucomannan utilization protein B; PTS system oligo-beta-mannoside-specific EIIB component [H]
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKKILLACSSGMSTSLLVTKMKDHATSIGDEAKIWAVGQDQVVTEMDEADVILIGPQMRFLLDKLKAQTSTPIEVIDMMA YGTANGKAAYEQAMKLMG
Sequences:
>Translated_98_residues MKKILLACSSGMSTSLLVTKMKDHATSIGDEAKIWAVGQDQVVTEMDEADVILIGPQMRFLLDKLKAQTSTPIEVIDMMA YGTANGKAAYEQAMKLMG >Mature_98_residues MKKILLACSSGMSTSLLVTKMKDHATSIGDEAKIWAVGQDQVVTEMDEADVILIGPQMRFLLDKLKAQTSTPIEVIDMMA YGTANGKAAYEQAMKLMG
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=86, Percent_Identity=39.5348837209302, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10626; Mature: 10626
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 9.2 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 9.2 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLACSSGMSTSLLVTKMKDHATSIGDEAKIWAVGQDQVVTEMDEADVILIGPQMRF CCCEEEEECCCCCCCCEEEHHHHHHCCCCCCCEEEEECCCCEEEECCCCCEEEECCHHHH LLDKLKAQTSTPIEVIDMMAYGTANGKAAYEQAMKLMG HHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKKILLACSSGMSTSLLVTKMKDHATSIGDEAKIWAVGQDQVVTEMDEADVILIGPQMRF CCCEEEEECCCCCCCCEEEHHHHHHCCCCCCCEEEEECCCCEEEECCCCCEEEECCHHHH LLDKLKAQTSTPIEVIDMMAYGTANGKAAYEQAMKLMG HHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]