| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917601
Identifier: 229917601
GI number: 229917601
Start: 1842576
End: 1843313
Strand: Direct
Name: 229917601
Synonym: EAT1b_1876
Alternate gene names: NA
Gene position: 1842576-1843313 (Clockwise)
Preceding gene: 229917600
Following gene: 229917602
Centisome position: 61.42
GC content: 49.86
Gene sequence:
>738_bases ATGACTTTATTTTTACGAGGGGTACGGTTAGAGAGGGAACGCATCCATTCAACGGGTTATCCGTACTCGTTACCAATCTT TCAGACACTCGATGAACTGACGTTTCATCATCCTGTCACCTTTCTTGTTGGAGAGAACGGGAGTGGGAAGTCGACATTGA TTGAGGGGATGGCCGTGGCGGCCGGATTCAATCCAGAAGGCGGAGCACCTTCCTTCCAATTTGAAACAGAGTCGACGCAT AGTTCCTTGTTTGAAGCGCTTCGTCCGATTCGAGGCCCGTATCGTCCAAAAGATGGCTTTTTCTTACGTGCCGAGACGGC ATATCAGCTATCAAGTTATGTGGACGAGATGGCGAAATCAGGGCGAGATCCTGAACGGTTTTATGAATCATACGGAGGAC GTTCCCTTCATGAGCAGTCGCACGGGGAAGCGTTTCTCTCCCTCATGTTGCATCGATTCCGTGGAGAGGGGCTTTACATT TTGGATGAGCCAGAGGCCGCATTGTCGCCGATGCGCCAATTGACGATGCTCGCACGCATGCATGAACTTGTCCAATCCGG CAGTCAATTCATCATTGCGAGTCATTCACCTATCTTGATGTCTTATCCAGGTGCGATGATTTTACAAGTGGAGACGGGCC TTACTCCGACTGCATTCGACGATCTGGAACATGTAAAGGTCATGCGCGACTATCTAGATGCGCCAGAGCGGATGCAACGG ATTTTGTTCGAAGAGTAA
Upstream 100 bases:
>100_bases ATGGTCTAGGTCTCGCTATCACGAAATTACTTCTTGACGCACAAGGACTTTCTTACGGGGTCGATTCAGATAAGGGGGCG ACGTTTTGGATCGGATGGAC
Downstream 100 bases:
>100_bases AACGGTCACGATGTAAGCGTTTTAATTTTATGTTGACGTCAAGATTTCTAGGGAGTATGCTTATATCGAAAAGAAGAAAA TCCACTTTGGGATTGTTACT
Product: ATPase AAA
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; ABC Transport System ATPase Component; RecF/RecN/SMC; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter; SMC Protein-Like Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTLFLRGVRLERERIHSTGYPYSLPIFQTLDELTFHHPVTFLVGENGSGKSTLIEGMAVAAGFNPEGGAPSFQFETESTH SSLFEALRPIRGPYRPKDGFFLRAETAYQLSSYVDEMAKSGRDPERFYESYGGRSLHEQSHGEAFLSLMLHRFRGEGLYI LDEPEAALSPMRQLTMLARMHELVQSGSQFIIASHSPILMSYPGAMILQVETGLTPTAFDDLEHVKVMRDYLDAPERMQR ILFEE
Sequences:
>Translated_245_residues MTLFLRGVRLERERIHSTGYPYSLPIFQTLDELTFHHPVTFLVGENGSGKSTLIEGMAVAAGFNPEGGAPSFQFETESTH SSLFEALRPIRGPYRPKDGFFLRAETAYQLSSYVDEMAKSGRDPERFYESYGGRSLHEQSHGEAFLSLMLHRFRGEGLYI LDEPEAALSPMRQLTMLARMHELVQSGSQFIIASHSPILMSYPGAMILQVETGLTPTAFDDLEHVKVMRDYLDAPERMQR ILFEE >Mature_244_residues TLFLRGVRLERERIHSTGYPYSLPIFQTLDELTFHHPVTFLVGENGSGKSTLIEGMAVAAGFNPEGGAPSFQFETESTHS SLFEALRPIRGPYRPKDGFFLRAETAYQLSSYVDEMAKSGRDPERFYESYGGRSLHEQSHGEAFLSLMLHRFRGEGLYIL DEPEAALSPMRQLTMLARMHELVQSGSQFIIASHSPILMSYPGAMILQVETGLTPTAFDDLEHVKVMRDYLDAPERMQRI LFEE
Specific function: Unknown
COG id: COG3910
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27730; Mature: 27599
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFLRGVRLERERIHSTGYPYSLPIFQTLDELTFHHPVTFLVGENGSGKSTLIEGMAVA CEEEEECHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHE AGFNPEGGAPSFQFETESTHSSLFEALRPIRGPYRPKDGFFLRAETAYQLSSYVDEMAKS ECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC GRDPERFYESYGGRSLHEQSHGEAFLSLMLHRFRGEGLYILDEPEAALSPMRQLTMLARM CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH HELVQSGSQFIIASHSPILMSYPGAMILQVETGLTPTAFDDLEHVKVMRDYLDAPERMQR HHHHHCCCCEEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH ILFEE HHCCC >Mature Secondary Structure TLFLRGVRLERERIHSTGYPYSLPIFQTLDELTFHHPVTFLVGENGSGKSTLIEGMAVA EEEEECHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHE AGFNPEGGAPSFQFETESTHSSLFEALRPIRGPYRPKDGFFLRAETAYQLSSYVDEMAKS ECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC GRDPERFYESYGGRSLHEQSHGEAFLSLMLHRFRGEGLYILDEPEAALSPMRQLTMLARM CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH HELVQSGSQFIIASHSPILMSYPGAMILQVETGLTPTAFDDLEHVKVMRDYLDAPERMQR HHHHHCCCCEEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHH ILFEE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA