| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917577
Identifier: 229917577
GI number: 229917577
Start: 1823029
End: 1823730
Strand: Direct
Name: 229917577
Synonym: EAT1b_1852
Alternate gene names: NA
Gene position: 1823029-1823730 (Clockwise)
Preceding gene: 229917574
Following gene: 229917580
Centisome position: 60.77
GC content: 47.44
Gene sequence:
>702_bases ATGAGTCGTGCTGAAGAATTTTTGGCATCCTATCATCGAATCGAGGACTACTTGAGTCGAGAGATGGGAGATGGGCAACA TTTCAGTTTTAGTAACATGGTGAATCGGTTAGCGAAACAAAATCCAATCATCGACCGGTATAAAGAAGATTTACATCAGA TGAGTCAACTACGAAATGCCATCGTCCATGAGCGGCGTGAACCTGATTTTATTATCGCGGAGCCACACGAGTCGCTCGTT GCATTGATTTTAGAAGTGGAACGTGAACTCCTGCACCCACGTCTCGTCATTCCGTTATTTGCAAAATCGGTGGTGACGTT TCAGTCCGAAGATTTTTTGACGGAAGTACTCCGGGAGATTCGAGATAAAAATTATTCGCAATTCCCGGTATATCATGACA ATGGATCTTGGCGCGGACTGTTGACGAAAAAAGGAGTGACCAGTTGGCTAGCCGAAACAATCGACGGGACCAACTTGTCA CTCAAAGGAGTTCGGGTGAAGCACGTCCTTCACCACGATCCGCATATGCACCGGTATCGATTCATTCGAAAGGATGCGAC GGTCATCGAGGCGCAGCACTGCTTTACGCAAATGAAAGAGGGCGCACGATATGACGCCCTTCTGATTACAGAGACCGGAA ATCCGGATGAACCGTTACTTGGCATCGTCCGGCCTCAAGATTTATTGAACGCGCTCCGTTGA
Upstream 100 bases:
>100_bases ATCATTTAGATGATTTCTATGTCATTCGGGATGAATAAACGGTTTCCTGCTCAAATGATGAAAAAGAGGGTATACATGTA TCGTTAAGGAGGGTGGTTAC
Downstream 100 bases:
>100_bases GGCGAGATGTTCAATGGCAACCTCATATTGGGTAACGGTGTTGCCGAGGACGATTGGTTTCACTTCTGAAGTCCCATCAT CACGCTTCTTATGGGCATGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: CBS Domain Containing Protein; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSRAEEFLASYHRIEDYLSREMGDGQHFSFSNMVNRLAKQNPIIDRYKEDLHQMSQLRNAIVHERREPDFIIAEPHESLV ALILEVERELLHPRLVIPLFAKSVVTFQSEDFLTEVLREIRDKNYSQFPVYHDNGSWRGLLTKKGVTSWLAETIDGTNLS LKGVRVKHVLHHDPHMHRYRFIRKDATVIEAQHCFTQMKEGARYDALLITETGNPDEPLLGIVRPQDLLNALR
Sequences:
>Translated_233_residues MSRAEEFLASYHRIEDYLSREMGDGQHFSFSNMVNRLAKQNPIIDRYKEDLHQMSQLRNAIVHERREPDFIIAEPHESLV ALILEVERELLHPRLVIPLFAKSVVTFQSEDFLTEVLREIRDKNYSQFPVYHDNGSWRGLLTKKGVTSWLAETIDGTNLS LKGVRVKHVLHHDPHMHRYRFIRKDATVIEAQHCFTQMKEGARYDALLITETGNPDEPLLGIVRPQDLLNALR >Mature_232_residues SRAEEFLASYHRIEDYLSREMGDGQHFSFSNMVNRLAKQNPIIDRYKEDLHQMSQLRNAIVHERREPDFIIAEPHESLVA LILEVERELLHPRLVIPLFAKSVVTFQSEDFLTEVLREIRDKNYSQFPVYHDNGSWRGLLTKKGVTSWLAETIDGTNLSL KGVRVKHVLHHDPHMHRYRFIRKDATVIEAQHCFTQMKEGARYDALLITETGNPDEPLLGIVRPQDLLNALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27192; Mature: 27061
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAEEFLASYHRIEDYLSREMGDGQHFSFSNMVNRLAKQNPIIDRYKEDLHQMSQLRNA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IVHERREPDFIIAEPHESLVALILEVERELLHPRLVIPLFAKSVVTFQSEDFLTEVLREI HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH RDKNYSQFPVYHDNGSWRGLLTKKGVTSWLAETIDGTNLSLKGVRVKHVLHHDPHMHRYR HHCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHHHH FIRKDATVIEAQHCFTQMKEGARYDALLITETGNPDEPLLGIVRPQDLLNALR HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHCC >Mature Secondary Structure SRAEEFLASYHRIEDYLSREMGDGQHFSFSNMVNRLAKQNPIIDRYKEDLHQMSQLRNA CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IVHERREPDFIIAEPHESLVALILEVERELLHPRLVIPLFAKSVVTFQSEDFLTEVLREI HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH RDKNYSQFPVYHDNGSWRGLLTKKGVTSWLAETIDGTNLSLKGVRVKHVLHHDPHMHRYR HHCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHHHH FIRKDATVIEAQHCFTQMKEGARYDALLITETGNPDEPLLGIVRPQDLLNALR HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA