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The map label for this gene is 229917522

Identifier: 229917522

GI number: 229917522

Start: 1765426

End: 1765944

Strand: Reverse

Name: 229917522

Synonym: EAT1b_1797

Alternate gene names: NA

Gene position: 1765944-1765426 (Counterclockwise)

Preceding gene: 229917523

Following gene: 229917521

Centisome position: 58.87

GC content: 46.05

Gene sequence:

>519_bases
TTGTTTAAAACTGGAGACTTAATCATCTACTCGACCCATGGCGTATGTCGCATCGACGACATTTCGGACAAAACGGTCGC
AGGAGAGACGAAATCGTACTATACGCTTCACCCCATCAACAACTCACAAAAGTTGCAAATCAGCATTCCTGTCGATAATG
ACAACGTGATGATGTTGACGTTACTGGAAGCAGACGAGGCATCAGAGATTTTAGAGTCGTTCCGCTCGCCTGGCGTGGAA
TGGAATCCGCATTCCAACAATCGCAATCGTGAATTTTTGAATGTCGTGCATTCAGGAAACCGTCACGAGATTGCCCAAGT
GGTCAATACATTGAGTCGTCGACAAATCGAGGCACTTCAAGCGAACAAAAAGCTATACGAACAAGATCGTAAAATTTTAG
AGAATGCCAAAACGATTTTGGTGAAAGAGCTCTCCCTTGCTCTCGAGCGTTCAGAGAGCGACATCGAGCGCACGATTGGC
GAGTACTTACATGAAAGCATGGCGACACTCACACCTTGA

Upstream 100 bases:

>100_bases
GACACGGTTTTTCATATGCATACATGACCCAAAACGTCAACCGAGTTGACATTTCATCTTCTGAATGACTATGCTTATAG
GTAAGGAAGAGGTGATCGAC

Downstream 100 bases:

>100_bases
CCCTTCCATTTGGAAGTGGTCTTTTTATTTTGCTACAATCATATACTTATTTTGACAGTTATCGGGTATCCTAATACAAA
CAAATCAACCGATATAGGGA

Product: CarD family transcriptional regulator

Products: NA

Alternate protein names: CarD Family Transcriptional Regulator; Transcriptional Regulator; CarD-Like Transcriptional Regulator; Transcription Factor; Transcription Regulator CarD; Transcriptional Regulator Card Family; CarD-Like Protein; Regulatory Protein; Transcriptional Regulator CarD; Transcriptional Regulator Card Domain Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFKTGDLIIYSTHGVCRIDDISDKTVAGETKSYYTLHPINNSQKLQISIPVDNDNVMMLTLLEADEASEILESFRSPGVE
WNPHSNNRNREFLNVVHSGNRHEIAQVVNTLSRRQIEALQANKKLYEQDRKILENAKTILVKELSLALERSESDIERTIG
EYLHESMATLTP

Sequences:

>Translated_172_residues
MFKTGDLIIYSTHGVCRIDDISDKTVAGETKSYYTLHPINNSQKLQISIPVDNDNVMMLTLLEADEASEILESFRSPGVE
WNPHSNNRNREFLNVVHSGNRHEIAQVVNTLSRRQIEALQANKKLYEQDRKILENAKTILVKELSLALERSESDIERTIG
EYLHESMATLTP
>Mature_172_residues
MFKTGDLIIYSTHGVCRIDDISDKTVAGETKSYYTLHPINNSQKLQISIPVDNDNVMMLTLLEADEASEILESFRSPGVE
WNPHSNNRNREFLNVVHSGNRHEIAQVVNTLSRRQIEALQANKKLYEQDRKILENAKTILVKELSLALERSESDIERTIG
EYLHESMATLTP

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19609; Mature: 19609

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTGDLIIYSTHGVCRIDDISDKTVAGETKSYYTLHPINNSQKLQISIPVDNDNVMMLT
CCCCCCEEEECCCCEEEECCCCCCEECCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEE
LLEADEASEILESFRSPGVEWNPHSNNRNREFLNVVHSGNRHEIAQVVNTLSRRQIEALQ
EECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ANKKLYEQDRKILENAKTILVKELSLALERSESDIERTIGEYLHESMATLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKTGDLIIYSTHGVCRIDDISDKTVAGETKSYYTLHPINNSQKLQISIPVDNDNVMMLT
CCCCCCEEEECCCCEEEECCCCCCEECCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEE
LLEADEASEILESFRSPGVEWNPHSNNRNREFLNVVHSGNRHEIAQVVNTLSRRQIEALQ
EECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ANKKLYEQDRKILENAKTILVKELSLALERSESDIERTIGEYLHESMATLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA