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The map label for this gene is bdlA [H]

Identifier: 229917521

GI number: 229917521

Start: 1764401

End: 1765315

Strand: Reverse

Name: bdlA [H]

Synonym: EAT1b_1796

Alternate gene names: 229917521

Gene position: 1765315-1764401 (Counterclockwise)

Preceding gene: 229917522

Following gene: 229917517

Centisome position: 58.85

GC content: 51.8

Gene sequence:

>915_bases
ATGCAACTGCACTCTAGTACGACCCATGTCACCGACACGCACGTCGTTCGGGCAATCGAAAACAATCTGGCCATCATTCG
CTTTGATGAACATCGCCGCGTCGCCTACGTCAATGAGATTTTTGCCAAAACGATGGGGTACGAAGTCAAGGAACTGATGG
GACGCCCCCATCGTGATCTTTGCTTGCCCGAGTTCGCGAACAGTCCCCAATACGACCTGTTTTGGCGTAAGCTCATGCAA
GGATTGAGTTATCACGACAAGATTGAACGACGTGCCGCCGATGGTCATAGCGTCTGGCTAGAAGCGACCTACATGCCAAT
CTTCGATGACGCCAATCAGAACGTCATCGGCGTTTCAAAGATTGCGGCCGATATCACGTCACGGCAACAAGACGTACTCC
ACATGGCGAATGATCTTCAAGAGACGTCTGAATACTTATCCGCCCAGTCCCAAATCGGGAAACAAGACGGAGAACACGTC
CTCGAGAACGTCAAACTGATTGAACAAGAGTCGACTCAAAACCTAGAGCACCTAAAAGCGCTCCAGCAAGAGGCGAAGAC
GATCACGGATATTGTCCGAACGATTCGCGAAATCGCTGCCCAAACCAACCTTCTCGCACTCAATGCCGCAATCGAGGCGG
CACGCGCAGGTGAGCATGGACGTGGCTTCAATGTCGTCGCGACAGAGGTCCGCAATCTTTCGAACAAAGTTTCGCTTTCC
ATCACTGAAGTGAACAACAACATCGAGGGCATCGTCAAACGCATCGATGACGTGTCGACGAGCATCGGACGCATCTCTCA
TAAAGTCAAAGATAGCTCCGGACAACTCGAACAGACGGTCCGCGAGTTTGAAAAACTGGCGGATTCAGCCGCCACACTCG
AACAGCAGGCGAAGACCTTCTTACGGATGGTCTAA

Upstream 100 bases:

>100_bases
TGGAAGTGGTCTTTTTATTTTGCTACAATCATATACTTATTTTGACAGTTATCGGGTATCCTAATACAAACAAATCAACC
GATATAGGGAGGATGTTAGG

Downstream 100 bases:

>100_bases
ATGTGCTAAAACCGTTCACTACAAGCAAAGACGATGTGTCTTGCTTCGGGTGAACGGTTTTTGTCATCTCTCGTTAAATT
GGGTTAATACATCCGCTCTT

Product: methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQLHSSTTHVTDTHVVRAIENNLAIIRFDEHRRVAYVNEIFAKTMGYEVKELMGRPHRDLCLPEFANSPQYDLFWRKLMQ
GLSYHDKIERRAADGHSVWLEATYMPIFDDANQNVIGVSKIAADITSRQQDVLHMANDLQETSEYLSAQSQIGKQDGEHV
LENVKLIEQESTQNLEHLKALQQEAKTITDIVRTIREIAAQTNLLALNAAIEAARAGEHGRGFNVVATEVRNLSNKVSLS
ITEVNNNIEGIVKRIDDVSTSIGRISHKVKDSSGQLEQTVREFEKLADSAATLEQQAKTFLRMV

Sequences:

>Translated_304_residues
MQLHSSTTHVTDTHVVRAIENNLAIIRFDEHRRVAYVNEIFAKTMGYEVKELMGRPHRDLCLPEFANSPQYDLFWRKLMQ
GLSYHDKIERRAADGHSVWLEATYMPIFDDANQNVIGVSKIAADITSRQQDVLHMANDLQETSEYLSAQSQIGKQDGEHV
LENVKLIEQESTQNLEHLKALQQEAKTITDIVRTIREIAAQTNLLALNAAIEAARAGEHGRGFNVVATEVRNLSNKVSLS
ITEVNNNIEGIVKRIDDVSTSIGRISHKVKDSSGQLEQTVREFEKLADSAATLEQQAKTFLRMV
>Mature_304_residues
MQLHSSTTHVTDTHVVRAIENNLAIIRFDEHRRVAYVNEIFAKTMGYEVKELMGRPHRDLCLPEFANSPQYDLFWRKLMQ
GLSYHDKIERRAADGHSVWLEATYMPIFDDANQNVIGVSKIAADITSRQQDVLHMANDLQETSEYLSAQSQIGKQDGEHV
LENVKLIEQESTQNLEHLKALQQEAKTITDIVRTIREIAAQTNLLALNAAIEAARAGEHGRGFNVVATEVRNLSNKVSLS
ITEVNNNIEGIVKRIDDVSTSIGRISHKVKDSSGQLEQTVREFEKLADSAATLEQQAKTFLRMV

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=154, Percent_Identity=37.012987012987, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI2367378, Length=171, Percent_Identity=35.672514619883, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788194, Length=207, Percent_Identity=29.4685990338164, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787690, Length=188, Percent_Identity=30.8510638297872, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789453, Length=120, Percent_Identity=35, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 34287; Mature: 34287

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHSSTTHVTDTHVVRAIENNLAIIRFDEHRRVAYVNEIFAKTMGYEVKELMGRPHRDL
CCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCC
CLPEFANSPQYDLFWRKLMQGLSYHDKIERRAADGHSVWLEATYMPIFDDANQNVIGVSK
CCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEHHHH
IAADITSRQQDVLHMANDLQETSEYLSAQSQIGKQDGEHVLENVKLIEQESTQNLEHLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQQEAKTITDIVRTIREIAAQTNLLALNAAIEAARAGEHGRGFNVVATEVRNLSNKVSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEE
ITEVNNNIEGIVKRIDDVSTSIGRISHKVKDSSGQLEQTVREFEKLADSAATLEQQAKTF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRMV
HHCC
>Mature Secondary Structure
MQLHSSTTHVTDTHVVRAIENNLAIIRFDEHRRVAYVNEIFAKTMGYEVKELMGRPHRDL
CCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCC
CLPEFANSPQYDLFWRKLMQGLSYHDKIERRAADGHSVWLEATYMPIFDDANQNVIGVSK
CCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEHHHH
IAADITSRQQDVLHMANDLQETSEYLSAQSQIGKQDGEHVLENVKLIEQESTQNLEHLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQQEAKTITDIVRTIREIAAQTNLLALNAAIEAARAGEHGRGFNVVATEVRNLSNKVSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEE
ITEVNNNIEGIVKRIDDVSTSIGRISHKVKDSSGQLEQTVREFEKLADSAATLEQQAKTF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRMV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]