| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is purA
Identifier: 229917476
GI number: 229917476
Start: 1718735
End: 1720024
Strand: Direct
Name: purA
Synonym: EAT1b_1751
Alternate gene names: 229917476
Gene position: 1718735-1720024 (Clockwise)
Preceding gene: 229917475
Following gene: 229917477
Centisome position: 57.29
GC content: 51.47
Gene sequence:
>1290_bases ATGTCATCAGTAGTCGTAGTGGGAACGCAGTGGGGCGATGAAGGGAAAGGGAAGATCACCGATTTCTTATCGAAACAAGC CGAAGTCGTCGCGCGTTATCAAGGGGGAGACAACGCTGGTCACACGATCGTCTTCAATGATACGAAATATAAACTTCACC TCATTCCGTCTGGGATTTTCTATTCGGATAAGACGTGTGTCATCGGGAACGGGATGGTCGTCAACCCGAAATCACTCGTG ACAGAACTCGCTTACTTACATGAACGTGGTGTGAGCACGGATAACCTTCGAATCTCGAACCGCGCGCATATCATCTTGCC GTACCACCAGCTTCAAGATCGTCTCGAAGAAGAGGCGAAAGGTGACGCGAAAGTCGGGACGACACTAAAAGGAATCGGCC CAGCATATATGGATAAGGCGGCACGTATCGGGATTCGCATCGCCGACCTTCTCGACAAAGAAGTGTTCGCGGAGAAGCTA AAGACCGTGCTTGAACTAAAAAACCGCATGTTCGTGAAAATGTATGAAGTCGATCCAATCGAGTTCGACGACATCTTTCA AGAATACTATGCGTACGGGCAACAGTTCGCGAAATACGTGTGTGATACATCGGTCGTCTTGAACGATTCACTCGATGAAG AGAAGAAGGTTCTCTTTGAAGGGGCTCAGGGGGTCCTTCTCGATATCGACCATGGAACGTATCCGTTCGTCACATCGTCG AACGCAGCGTCAGGTGGCGTATCGAGTGGTGCCGGAATCGGGCCATCGAAGATTCATCACGTGGTCGGCGTCTGTAAAGC ATACACGTCACGCGTCGGTGACGGTCCGTTCCCGACAGAACTCGACGATGAGATCGGTCATACGATCCGTGAAGTCGGGA AAGAATACGGAACGACAACTGGTCGTCCACGCCGTGTCGGCTGGTTCGACTCGGTCGTCGTGCGTCACTCACGCCGCGTC AGCGGGATCACCGATCTTTGCCTCAACTCCATCGATGTATTGACAGGTCTTGAGACGCTCAAGATTTGTACATCGTATGA GTACGAAGGAAAGCATCTCGACGAGTATCCACCGAACTTCCGCGTCCTTGAGAAGTGTGTACCGGTATACGAAGAGCTTC CTGGCTGGACAGAAGACATCACAGGGGTTCGTCGCTTTGAAGATCTTCCGGAGAACGCACAGCGTTACGTGCGTCGCATC GAGGAATTGACAGGAATCGAGTTGTTGACGTTCTCGGTCGGACCGGCTCGTGAACAGACAGTCATCTTGCGTGATATTTA CGAAGCATAA
Upstream 100 bases:
>100_bases TCTTATATAAAACGTTCGGTATTCAATTGACTTTCTCGCTTTTCAAGTGTACACTTACGGATGGTTTGAACAGAACGTTG ATTAATAAGGAGGATTCATT
Downstream 100 bases:
>100_bases GAAAGGGAGCCATCGGGCTCTCTTTTTCTATTTCCACGGAAATGGACCACGCTTTCTAAGCGGTTTAAAAAGAGTTACAA TGTAGGCATGTACGTTTAAT
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSSVVVVGTQWGDEGKGKITDFLSKQAEVVARYQGGDNAGHTIVFNDTKYKLHLIPSGIFYSDKTCVIGNGMVVNPKSLV TELAYLHERGVSTDNLRISNRAHIILPYHQLQDRLEEEAKGDAKVGTTLKGIGPAYMDKAARIGIRIADLLDKEVFAEKL KTVLELKNRMFVKMYEVDPIEFDDIFQEYYAYGQQFAKYVCDTSVVLNDSLDEEKKVLFEGAQGVLLDIDHGTYPFVTSS NAASGGVSSGAGIGPSKIHHVVGVCKAYTSRVGDGPFPTELDDEIGHTIREVGKEYGTTTGRPRRVGWFDSVVVRHSRRV SGITDLCLNSIDVLTGLETLKICTSYEYEGKHLDEYPPNFRVLEKCVPVYEELPGWTEDITGVRRFEDLPENAQRYVRRI EELTGIELLTFSVGPAREQTVILRDIYEA
Sequences:
>Translated_429_residues MSSVVVVGTQWGDEGKGKITDFLSKQAEVVARYQGGDNAGHTIVFNDTKYKLHLIPSGIFYSDKTCVIGNGMVVNPKSLV TELAYLHERGVSTDNLRISNRAHIILPYHQLQDRLEEEAKGDAKVGTTLKGIGPAYMDKAARIGIRIADLLDKEVFAEKL KTVLELKNRMFVKMYEVDPIEFDDIFQEYYAYGQQFAKYVCDTSVVLNDSLDEEKKVLFEGAQGVLLDIDHGTYPFVTSS NAASGGVSSGAGIGPSKIHHVVGVCKAYTSRVGDGPFPTELDDEIGHTIREVGKEYGTTTGRPRRVGWFDSVVVRHSRRV SGITDLCLNSIDVLTGLETLKICTSYEYEGKHLDEYPPNFRVLEKCVPVYEELPGWTEDITGVRRFEDLPENAQRYVRRI EELTGIELLTFSVGPAREQTVILRDIYEA >Mature_428_residues SSVVVVGTQWGDEGKGKITDFLSKQAEVVARYQGGDNAGHTIVFNDTKYKLHLIPSGIFYSDKTCVIGNGMVVNPKSLVT ELAYLHERGVSTDNLRISNRAHIILPYHQLQDRLEEEAKGDAKVGTTLKGIGPAYMDKAARIGIRIADLLDKEVFAEKLK TVLELKNRMFVKMYEVDPIEFDDIFQEYYAYGQQFAKYVCDTSVVLNDSLDEEKKVLFEGAQGVLLDIDHGTYPFVTSSN AASGGVSSGAGIGPSKIHHVVGVCKAYTSRVGDGPFPTELDDEIGHTIREVGKEYGTTTGRPRRVGWFDSVVVRHSRRVS GITDLCLNSIDVLTGLETLKICTSYEYEGKHLDEYPPNFRVLEKCVPVYEELPGWTEDITGVRRFEDLPENAQRYVRRIE ELTGIELLTFSVGPAREQTVILRDIYEA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=42.9577464788732, Blast_Score=342, Evalue=5e-94, Organism=Homo sapiens, GI34577063, Length=428, Percent_Identity=42.5233644859813, Blast_Score=335, Evalue=6e-92, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=41.8136020151133, Blast_Score=301, Evalue=7e-82, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=46.9767441860465, Blast_Score=414, Evalue=1e-117, Organism=Caenorhabditis elegans, GI25146553, Length=427, Percent_Identity=41.6861826697892, Blast_Score=327, Evalue=1e-89, Organism=Caenorhabditis elegans, GI25146555, Length=427, Percent_Identity=41.6861826697892, Blast_Score=326, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=42.1911421911422, Blast_Score=352, Evalue=8e-98, Organism=Drosophila melanogaster, GI21356033, Length=421, Percent_Identity=42.5178147268409, Blast_Score=337, Evalue=1e-92,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_EXISA (C4L014)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002886122.1 - GeneID: 7870798 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_1751 - OMA: DYVVRYQ - ProtClustDB: CLSK2613248 - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 47833; Mature: 47702
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 13-13 ACT_SITE 41-41 BINDING 128-128 BINDING 142-142 BINDING 223-223 BINDING 238-238 BINDING 302-302 BINDING 304-304
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVVVVGTQWGDEGKGKITDFLSKQAEVVARYQGGDNAGHTIVFNDTKYKLHLIPSGIF CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCEEEEEEEECCEE YSDKTCVIGNGMVVNPKSLVTELAYLHERGVSTDNLRISNRAHIILPYHQLQDRLEEEAK ECCCEEEECCCEEECHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECHHHHHHHHHHHHC GDAKVGTTLKGIGPAYMDKAARIGIRIADLLDKEVFAEKLKTVLELKNRMFVKMYEVDPI CCCHHCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC EFDDIFQEYYAYGQQFAKYVCDTSVVLNDSLDEEKKVLFEGAQGVLLDIDHGTYPFVTSS CHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEECC NAASGGVSSGAGIGPSKIHHVVGVCKAYTSRVGDGPFPTELDDEIGHTIREVGKEYGTTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GRPRRVGWFDSVVVRHSRRVSGITDLCLNSIDVLTGLETLKICTSYEYEGKHLDEYPPNF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH RVLEKCVPVYEELPGWTEDITGVRRFEDLPENAQRYVRRIEELTGIELLTFSVGPAREQT HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCE VILRDIYEA EHHHHHHCC >Mature Secondary Structure SSVVVVGTQWGDEGKGKITDFLSKQAEVVARYQGGDNAGHTIVFNDTKYKLHLIPSGIF CCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCEEEEEEEECCEE YSDKTCVIGNGMVVNPKSLVTELAYLHERGVSTDNLRISNRAHIILPYHQLQDRLEEEAK ECCCEEEECCCEEECHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECHHHHHHHHHHHHC GDAKVGTTLKGIGPAYMDKAARIGIRIADLLDKEVFAEKLKTVLELKNRMFVKMYEVDPI CCCHHCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC EFDDIFQEYYAYGQQFAKYVCDTSVVLNDSLDEEKKVLFEGAQGVLLDIDHGTYPFVTSS CHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEECC NAASGGVSSGAGIGPSKIHHVVGVCKAYTSRVGDGPFPTELDDEIGHTIREVGKEYGTTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GRPRRVGWFDSVVVRHSRRVSGITDLCLNSIDVLTGLETLKICTSYEYEGKHLDEYPPNF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH RVLEKCVPVYEELPGWTEDITGVRRFEDLPENAQRYVRRIEELTGIELLTFSVGPAREQT HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCE VILRDIYEA EHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA