| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917449
Identifier: 229917449
GI number: 229917449
Start: 1690697
End: 1691686
Strand: Reverse
Name: 229917449
Synonym: EAT1b_1724
Alternate gene names: NA
Gene position: 1691686-1690697 (Counterclockwise)
Preceding gene: 229917450
Following gene: 229917448
Centisome position: 56.39
GC content: 43.94
Gene sequence:
>990_bases GTGCGTTTGAACTTATCTACTGTACATGTTGGGATGACGCTATTGTCACCCGTTTCTTCTTTAGAAGCCGGAATCCACTT AACCAATGAACATTTACGTTTGCTCCGTTTCTTAAAAATCGAAGACATCGATGTCGCGCCTGTTGAACAGACAATCTTCA CGTCTAAAGAAGAACAGCGCCTCTGTGATCAGGTCCTTCAATATGAGAAACATTATAATCAGTGGGAAGAACGAATCGCA CCTAACCCATATGAAGGTCTTGAATTCATTCACCAGTTATTTCGTCAAGAAGTTCCTCTTACAGCGGTCGTCCATTTCTT TACACATCAACCGTTGCGAAAAAATCACGTCATTTATCATTCCGTTTATCGGGCGCTCGTCGCCCGTGCCTTATCGAAAT ATCGAGGGGACGAACATCAACTCCAATTCGATTACGGGATTGCTTCTTATTTTGCAGATGCGAGCTACGCTAAAATTCGG AAATGGTCTCATATGCGTTATTTCACAAAAATGGAACGGGAACTATTGTATCAACACCCACTCGTTTCGGCATCGATGCT TCCGAGTACGCAAACGTTACGAGGAAGAGTGTATCAGTTGATTACCGAGCACCATGAGCGATTAGATGGATCCGGGTTTC CAAAACGTCTGACGGAACGCGAGTTGAATCCAGCCTCTCCTCTATTTATTGTCGCCGATCGTTTCTGTCAGTTAACAGCA CCTCGGACGTTCCGAAAGCCGCTCTCCCCAGAAGAAGCATATTTCTACATGTGGCAGAACAAGGTCTATGATGGAGAGGC TTTATCGCTACTCGCAACCTTGCTTGGATTTTATGAAGTCGGTCGCCCCGTTTTATTGAGTAATGGAGTACGTGGAACGA TTCATGCCTATACAAATCGTGTCGAACAACCGATCATACTTGATGACACAGGCGAGAAAGAATATGATTTATCGCGATTA ACTGAAATGAGCATTGTTGCATTTCAATAA
Upstream 100 bases:
>100_bases TGAAGCACCTGAAACCGACGAATCGTCTGATGTGAATGAGTAAGACGAGAGGTCGAACGGTGTTTCCGTTCGACCTTTTC ATATATTAGGAGGAATTCGC
Downstream 100 bases:
>100_bases GAAGAAACTAGCGATTCCTTTCATCACAATGAAGTGGAATCGTCTTTATTTATTCTTTTTTAAAAAACTTTCTTTTTATA GTTGACGGATATAATTACAG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: HD-GYP Domain-Containing Protein; HD Domain-Containing Protein; C-Di-GMP Phosphodiesterase Class II; HD Family Metal-Dependent Phosphohydrolase; HDIG Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Region; Metal Dependent Phosphohydrolase Domain-Containing Protein
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRLNLSTVHVGMTLLSPVSSLEAGIHLTNEHLRLLRFLKIEDIDVAPVEQTIFTSKEEQRLCDQVLQYEKHYNQWEERIA PNPYEGLEFIHQLFRQEVPLTAVVHFFTHQPLRKNHVIYHSVYRALVARALSKYRGDEHQLQFDYGIASYFADASYAKIR KWSHMRYFTKMERELLYQHPLVSASMLPSTQTLRGRVYQLITEHHERLDGSGFPKRLTERELNPASPLFIVADRFCQLTA PRTFRKPLSPEEAYFYMWQNKVYDGEALSLLATLLGFYEVGRPVLLSNGVRGTIHAYTNRVEQPIILDDTGEKEYDLSRL TEMSIVAFQ
Sequences:
>Translated_329_residues MRLNLSTVHVGMTLLSPVSSLEAGIHLTNEHLRLLRFLKIEDIDVAPVEQTIFTSKEEQRLCDQVLQYEKHYNQWEERIA PNPYEGLEFIHQLFRQEVPLTAVVHFFTHQPLRKNHVIYHSVYRALVARALSKYRGDEHQLQFDYGIASYFADASYAKIR KWSHMRYFTKMERELLYQHPLVSASMLPSTQTLRGRVYQLITEHHERLDGSGFPKRLTERELNPASPLFIVADRFCQLTA PRTFRKPLSPEEAYFYMWQNKVYDGEALSLLATLLGFYEVGRPVLLSNGVRGTIHAYTNRVEQPIILDDTGEKEYDLSRL TEMSIVAFQ >Mature_329_residues MRLNLSTVHVGMTLLSPVSSLEAGIHLTNEHLRLLRFLKIEDIDVAPVEQTIFTSKEEQRLCDQVLQYEKHYNQWEERIA PNPYEGLEFIHQLFRQEVPLTAVVHFFTHQPLRKNHVIYHSVYRALVARALSKYRGDEHQLQFDYGIASYFADASYAKIR KWSHMRYFTKMERELLYQHPLVSASMLPSTQTLRGRVYQLITEHHERLDGSGFPKRLTERELNPASPLFIVADRFCQLTA PRTFRKPLSPEEAYFYMWQNKVYDGEALSLLATLLGFYEVGRPVLLSNGVRGTIHAYTNRVEQPIILDDTGEKEYDLSRL TEMSIVAFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38421; Mature: 38421
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNLSTVHVGMTLLSPVSSLEAGIHLTNEHLRLLRFLKIEDIDVAPVEQTIFTSKEEQR CCCCCHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHH LCDQVLQYEKHYNQWEERIAPNPYEGLEFIHQLFRQEVPLTAVVHFFTHQPLRKNHVIYH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHH SVYRALVARALSKYRGDEHQLQFDYGIASYFADASYAKIRKWSHMRYFTKMERELLYQHP HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LVSASMLPSTQTLRGRVYQLITEHHERLDGSGFPKRLTERELNPASPLFIVADRFCQLTA CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHCC PRTFRKPLSPEEAYFYMWQNKVYDGEALSLLATLLGFYEVGRPVLLSNGVRGTIHAYTNR CHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHH VEQPIILDDTGEKEYDLSRLTEMSIVAFQ CCCCEEEECCCCCHHHHHHHHHHHHEECC >Mature Secondary Structure MRLNLSTVHVGMTLLSPVSSLEAGIHLTNEHLRLLRFLKIEDIDVAPVEQTIFTSKEEQR CCCCCHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHH LCDQVLQYEKHYNQWEERIAPNPYEGLEFIHQLFRQEVPLTAVVHFFTHQPLRKNHVIYH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHH SVYRALVARALSKYRGDEHQLQFDYGIASYFADASYAKIRKWSHMRYFTKMERELLYQHP HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LVSASMLPSTQTLRGRVYQLITEHHERLDGSGFPKRLTERELNPASPLFIVADRFCQLTA CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEHHHHHHHCC PRTFRKPLSPEEAYFYMWQNKVYDGEALSLLATLLGFYEVGRPVLLSNGVRGTIHAYTNR CHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHH VEQPIILDDTGEKEYDLSRLTEMSIVAFQ CCCCEEEECCCCCHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA