| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yabN [H]
Identifier: 229917408
GI number: 229917408
Start: 1631703
End: 1633118
Strand: Reverse
Name: yabN [H]
Synonym: EAT1b_1683
Alternate gene names: 229917408
Gene position: 1633118-1631703 (Counterclockwise)
Preceding gene: 229917409
Following gene: 229917407
Centisome position: 54.44
GC content: 50.14
Gene sequence:
>1416_bases ATGGGTTATACAATCACGGTGGTCGGACTCGGGTCTGGTGAGTTGAATCAATTGCCGCTCGGTGTGTACCGCCATTTAAA ACAGCAACCGCTCGTCTGGTTGCGCACAAAAGAACACCCTGTCGTACAAGAGTTAGAAGCGGAAGGACTCGTGTTCGAAT CATTTGATTCGGTCTATGAATCGAGTGATACGTTTGAAGAAGTATACGACCAGATTGTCGAGACGTTATTGAGTAAAAGT GAAGAAATGGCGATCACATACGCCGTACCGGGCCACCCGTTCGTAGCGGAACGGACCGTCGAACTATTGGTGGAAAGGGG AGCCGATCTGCATGTGCTCGGTGGACAGAGCTTCCTCGATGCCATGTTCCAGGCGCTCCGGATCGATCCAATCAATGGAT TTCAACTGCTCGATGCGACTGCGCTCGACCTTGAACGTTTGCAGGTGACTCAACATGTCCTCATCGGGCAAGTGTACGAT GGATTCGTGGCGGGTGACGTCAAAGTGCAATTGATGGAACGGTATCCGGATGACCATCCCGTCACCCTTGTGACGGCAGC CGGTACGACAGAAGAGCGGATCGCGCACATCCCGTTATTCGAAATGGACCGGATGGCGGAAGTGAACAACTTGACGACGC TCTACGTTCCGCCGCTCGAGGATGAATCGTATTTGGCGAAGGATTTTGCGACACTCAAACAGATCATCGCAACGCTTCGA GGACCAGACGGGTGCCCGTGGGATCGTAAACAGACGCATGCGTCACTTCGCAAGTATTTATTAGAAGAGGCGTATGAGTT GATTGAAGCGATCAATGCAGAAGACGATGATGCCATCATCGAAGAACTCGGTGACGTCTTGCTTCAAGTGATGTTGCATG CTCAAATCGGAGAAGATGAAGGCTATTTCGATATTCGTGACGTAATCGGTTCCATCAGTGAGAAGATGGTACGCCGCCAT CCGCACGTCTTTGGCGATGTCACCGTCGAAGATGCCTCTGACGTGGTGAAAAACTGGAATACGATTAAACAGACGGAAAA AGGGGAAAAGAAACAATCGCAACTCGATGGTGTTCTCGTCGACCAACCTTCATTGATGCGAGCGGAGCAACTTCAAAAGA AAGCGGCTCACGTCGGATTTGAGTGGGATGACGTATCCGGTGCCTTCGAAAAACTGGAAGAAGAGTTAAAAGAATGGCAT GAAGACCTAAGTGATGAATCGGAACTTGGAGACGTATTGTTCTCCATCGTGAACATTGCGCGATACGTTGGGCTGAATGC CGAGCAAGCATTAGAACAGACGAACCGAAAGTTCAAACGTCGATTCGAGTACGTGGAAGCGAACGGTGACCTTCACCAGA TGACACTCGAACAGATGGATGCGCTTTGGAACGAGGCAAAGGAGAAAGGTTTATGA
Upstream 100 bases:
>100_bases TGGAGACTATGGAGTACGCGAATGCTGTCACTTGCGGAATGGGAACTGATCCCGTTCGGAAGTCGTCTGCTCGACGTGCT CGAGAAAAAGGAGAACTAAT
Downstream 100 bases:
>100_bases GACTAGATAAGTTTTTAAAAGTGTCACGTCTAATCAAGCGTCGCACGTTGGCAAAAGAAGTGGCGGACCAAGGACGAATT CAACTGAATGGGCAAGTCGC
Product: MazG family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MGYTITVVGLGSGELNQLPLGVYRHLKQQPLVWLRTKEHPVVQELEAEGLVFESFDSVYESSDTFEEVYDQIVETLLSKS EEMAITYAVPGHPFVAERTVELLVERGADLHVLGGQSFLDAMFQALRIDPINGFQLLDATALDLERLQVTQHVLIGQVYD GFVAGDVKVQLMERYPDDHPVTLVTAAGTTEERIAHIPLFEMDRMAEVNNLTTLYVPPLEDESYLAKDFATLKQIIATLR GPDGCPWDRKQTHASLRKYLLEEAYELIEAINAEDDDAIIEELGDVLLQVMLHAQIGEDEGYFDIRDVIGSISEKMVRRH PHVFGDVTVEDASDVVKNWNTIKQTEKGEKKQSQLDGVLVDQPSLMRAEQLQKKAAHVGFEWDDVSGAFEKLEEELKEWH EDLSDESELGDVLFSIVNIARYVGLNAEQALEQTNRKFKRRFEYVEANGDLHQMTLEQMDALWNEAKEKGL
Sequences:
>Translated_471_residues MGYTITVVGLGSGELNQLPLGVYRHLKQQPLVWLRTKEHPVVQELEAEGLVFESFDSVYESSDTFEEVYDQIVETLLSKS EEMAITYAVPGHPFVAERTVELLVERGADLHVLGGQSFLDAMFQALRIDPINGFQLLDATALDLERLQVTQHVLIGQVYD GFVAGDVKVQLMERYPDDHPVTLVTAAGTTEERIAHIPLFEMDRMAEVNNLTTLYVPPLEDESYLAKDFATLKQIIATLR GPDGCPWDRKQTHASLRKYLLEEAYELIEAINAEDDDAIIEELGDVLLQVMLHAQIGEDEGYFDIRDVIGSISEKMVRRH PHVFGDVTVEDASDVVKNWNTIKQTEKGEKKQSQLDGVLVDQPSLMRAEQLQKKAAHVGFEWDDVSGAFEKLEEELKEWH EDLSDESELGDVLFSIVNIARYVGLNAEQALEQTNRKFKRRFEYVEANGDLHQMTLEQMDALWNEAKEKGL >Mature_470_residues GYTITVVGLGSGELNQLPLGVYRHLKQQPLVWLRTKEHPVVQELEAEGLVFESFDSVYESSDTFEEVYDQIVETLLSKSE EMAITYAVPGHPFVAERTVELLVERGADLHVLGGQSFLDAMFQALRIDPINGFQLLDATALDLERLQVTQHVLIGQVYDG FVAGDVKVQLMERYPDDHPVTLVTAAGTTEERIAHIPLFEMDRMAEVNNLTTLYVPPLEDESYLAKDFATLKQIIATLRG PDGCPWDRKQTHASLRKYLLEEAYELIEAINAEDDDAIIEELGDVLLQVMLHAQIGEDEGYFDIRDVIGSISEKMVRRHP HVFGDVTVEDASDVVKNWNTIKQTEKGEKKQSQLDGVLVDQPSLMRAEQLQKKAAHVGFEWDDVSGAFEKLEEELKEWHE DLSDESELGDVLFSIVNIARYVGLNAEQALEQTNRKFKRRFEYVEANGDLHQMTLEQMDALWNEAKEKGL
Specific function: Unknown
COG id: COG3956
COG function: function code R; Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789144, Length=250, Percent_Identity=42.8, Blast_Score=203, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG; PF00590 TP_methylase [H]
EC number: NA
Molecular weight: Translated: 53348; Mature: 53217
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYTITVVGLGSGELNQLPLGVYRHLKQQPLVWLRTKEHPVVQELEAEGLVFESFDSVYE CCEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHC SSDTFEEVYDQIVETLLSKSEEMAITYAVPGHPFVAERTVELLVERGADLHVLGGQSFLD CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCHHHHH AMFQALRIDPINGFQLLDATALDLERLQVTQHVLIGQVYDGFVAGDVKVQLMERYPDDHP HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCCCC VTLVTAAGTTEERIAHIPLFEMDRMAEVNNLTTLYVPPLEDESYLAKDFATLKQIIATLR EEEEEECCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC GPDGCPWDRKQTHASLRKYLLEEAYELIEAINAEDDDAIIEELGDVLLQVMLHAQIGEDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GYFDIRDVIGSISEKMVRRHPHVFGDVTVEDASDVVKNWNTIKQTEKGEKKQSQLDGVLV CCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHHHHHHHCCHHHHHHHCCEEE DQPSLMRAEQLQKKAAHVGFEWDDVSGAFEKLEEELKEWHEDLSDESELGDVLFSIVNIA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYVGLNAEQALEQTNRKFKRRFEYVEANGDLHQMTLEQMDALWNEAKEKGL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GYTITVVGLGSGELNQLPLGVYRHLKQQPLVWLRTKEHPVVQELEAEGLVFESFDSVYE CEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHC SSDTFEEVYDQIVETLLSKSEEMAITYAVPGHPFVAERTVELLVERGADLHVLGGQSFLD CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCHHHHH AMFQALRIDPINGFQLLDATALDLERLQVTQHVLIGQVYDGFVAGDVKVQLMERYPDDHP HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCCCC VTLVTAAGTTEERIAHIPLFEMDRMAEVNNLTTLYVPPLEDESYLAKDFATLKQIIATLR EEEEEECCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC GPDGCPWDRKQTHASLRKYLLEEAYELIEAINAEDDDAIIEELGDVLLQVMLHAQIGEDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GYFDIRDVIGSISEKMVRRHPHVFGDVTVEDASDVVKNWNTIKQTEKGEKKQSQLDGVLV CCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHHHHHHHCCHHHHHHHCCEEE DQPSLMRAEQLQKKAAHVGFEWDDVSGAFEKLEEELKEWHEDLSDESELGDVLFSIVNIA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYVGLNAEQALEQTNRKFKRRFEYVEANGDLHQMTLEQMDALWNEAKEKGL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]