| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yrzF [H]
Identifier: 229917267
GI number: 229917267
Start: 1504057
End: 1504668
Strand: Reverse
Name: yrzF [H]
Synonym: EAT1b_1542
Alternate gene names: 229917267
Gene position: 1504668-1504057 (Counterclockwise)
Preceding gene: 229917271
Following gene: 229917266
Centisome position: 50.16
GC content: 44.44
Gene sequence:
>612_bases ATGAGTGACTATGAACAATATGCGGACGTCACCTTCGAGCAGGTGGGTGACTCGTTTCAGGTAGCCGCGATGCACCCAGA TCTTCGTTTACATGGAATTGGACGAAGTGCGGCCGTGTTTCGTTTAAAGGAGAAGGATCGTGTCATTAAAGTGTTCTTTC CAGGCTATGAACAAATCGCAATCGAAGAAGCAGCAATCTATAAAAAACTAAGGGGACTCCCTTACTTTCCGAAGTGCTAT GAGTCCGGTGCGTCATATATCGTGATGGATTACATCGAAGGAAAGACGCTATTTGAGTGTCTGACGGAAGGCGTTTGGAT TGACCCTTCTTACATCGAGGTAGTGGATGAAGCGCTTCGACAAGCGCGGTTATTAGGACTAACGCCATCGGATGTCCATT TGCGTAATATCATTTTGACACCGAACGGACAGATTTTCTTGATTGATTTGGCACGATTCAGACAAGGGCAACAAATTGAT CATCAGTGGGAAGACTTGAAACGAATGTATCGATTGTATCGCTATCGTTTCATGCCGAAACAATATGATGAGACATTACT GAATCGAATCGCTTACTTGTATCGTAAGTTCGTGAACGATCCGGATTCTTGA
Upstream 100 bases:
>100_bases GAAAAGACGTCACTTGTCACCTACTCGAGCAGTTTTAGCGTCAAATGAGCTTGTATGCGCTATGATGAGAGAGAAGAGAA ATAGGAAAGAGGCGTGACAG
Downstream 100 bases:
>100_bases GCCGGGTCGTTTTTCTTTTGCCGATTAGGGAACAGGAGTAACGTGTCCGAAATTGGAGAAGAAACGAAAGGGGAATGATG TATGGCTCATCGTATCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSDYEQYADVTFEQVGDSFQVAAMHPDLRLHGIGRSAAVFRLKEKDRVIKVFFPGYEQIAIEEAAIYKKLRGLPYFPKCY ESGASYIVMDYIEGKTLFECLTEGVWIDPSYIEVVDEALRQARLLGLTPSDVHLRNIILTPNGQIFLIDLARFRQGQQID HQWEDLKRMYRLYRYRFMPKQYDETLLNRIAYLYRKFVNDPDS
Sequences:
>Translated_203_residues MSDYEQYADVTFEQVGDSFQVAAMHPDLRLHGIGRSAAVFRLKEKDRVIKVFFPGYEQIAIEEAAIYKKLRGLPYFPKCY ESGASYIVMDYIEGKTLFECLTEGVWIDPSYIEVVDEALRQARLLGLTPSDVHLRNIILTPNGQIFLIDLARFRQGQQID HQWEDLKRMYRLYRYRFMPKQYDETLLNRIAYLYRKFVNDPDS >Mature_202_residues SDYEQYADVTFEQVGDSFQVAAMHPDLRLHGIGRSAAVFRLKEKDRVIKVFFPGYEQIAIEEAAIYKKLRGLPYFPKCYE SGASYIVMDYIEGKTLFECLTEGVWIDPSYIEVVDEALRQARLLGLTPSDVHLRNIILTPNGQIFLIDLARFRQGQQIDH QWEDLKRMYRLYRYRFMPKQYDETLLNRIAYLYRKFVNDPDS
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR017441 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 23928; Mature: 23797
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYEQYADVTFEQVGDSFQVAAMHPDLRLHGIGRSAAVFRLKEKDRVIKVFFPGYEQIA CCCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEEECCCHHHH IEEAAIYKKLRGLPYFPKCYESGASYIVMDYIEGKTLFECLTEGVWIDPSYIEVVDEALR HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHH QARLLGLTPSDVHLRNIILTPNGQIFLIDLARFRQGQQIDHQWEDLKRMYRLYRYRFMPK HHHHCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC QYDETLLNRIAYLYRKFVNDPDS HHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDYEQYADVTFEQVGDSFQVAAMHPDLRLHGIGRSAAVFRLKEKDRVIKVFFPGYEQIA CCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEEECCCHHHH IEEAAIYKKLRGLPYFPKCYESGASYIVMDYIEGKTLFECLTEGVWIDPSYIEVVDEALR HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHH QARLLGLTPSDVHLRNIILTPNGQIFLIDLARFRQGQQIDHQWEDLKRMYRLYRYRFMPK HHHHCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC QYDETLLNRIAYLYRKFVNDPDS HHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]