| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yhjQ [H]
Identifier: 229917266
GI number: 229917266
Start: 1503646
End: 1503975
Strand: Reverse
Name: yhjQ [H]
Synonym: EAT1b_1541
Alternate gene names: 229917266
Gene position: 1503975-1503646 (Counterclockwise)
Preceding gene: 229917267
Following gene: 229917265
Centisome position: 50.13
GC content: 51.52
Gene sequence:
>330_bases ATGGCTCATCGTATCTATGCGAATGAACTCGAAATGCTCCACGAATGTGTGGAAACGTGCAACTACTGTCTGGAATCTTG TTTAGAAGAAAAAGATGTACAGATGATGGTCGATTGTATCCGACTGGATCGGGAATGTGCCGCTGCCTGTGCGTTTCTTG CCGAGGCGATGACGCGTGATTCGGCATTCGTTCCTGAACTCGCGCGAGCGTGTGCGGTCATCTGCAAAGCATGCGCACAG GAGTGTGGGAAGCATAAGCACGCACATTGCCAAGAATGCGCAAGAGTTTGTACAGAATGCGCCTCGATGTGTGACCGCTT GGCCGCATGA
Upstream 100 bases:
>100_bases GAACGATCCGGATTCTTGAGCCGGGTCGTTTTTCTTTTGCCGATTAGGGAACAGGAGTAACGTGTCCGAAATTGGAGAAG AAACGAAAGGGGAATGATGT
Downstream 100 bases:
>100_bases GTTGAGTGACCGGTTGATGGGACCGGTCACTTTTTTCGTGTCTTTTGAAGAAGGGATTCGTATAATGAAAAAAACGAAAA GGTGGTATGGGGATGATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MAHRIYANELEMLHECVETCNYCLESCLEEKDVQMMVDCIRLDRECAAACAFLAEAMTRDSAFVPELARACAVICKACAQ ECGKHKHAHCQECARVCTECASMCDRLAA
Sequences:
>Translated_109_residues MAHRIYANELEMLHECVETCNYCLESCLEEKDVQMMVDCIRLDRECAAACAFLAEAMTRDSAFVPELARACAVICKACAQ ECGKHKHAHCQECARVCTECASMCDRLAA >Mature_108_residues AHRIYANELEMLHECVETCNYCLESCLEEKDVQMMVDCIRLDRECAAACAFLAEAMTRDSAFVPELARACAVICKACAQE CGKHKHAHCQECARVCTECASMCDRLAA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005560 [H]
Pfam domain/function: PF03860 DUF326 [H]
EC number: NA
Molecular weight: Translated: 12143; Mature: 12012
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 20.2 %Cys+Met (Translated Protein) 14.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 19.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRIYANELEMLHECVETCNYCLESCLEEKDVQMMVDCIRLDRECAAACAFLAEAMTRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SAFVPELARACAVICKACAQECGKHKHAHCQECARVCTECASMCDRLAA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHRIYANELEMLHECVETCNYCLESCLEEKDVQMMVDCIRLDRECAAACAFLAEAMTRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SAFVPELARACAVICKACAQECGKHKHAHCQECARVCTECASMCDRLAA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]