Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yoaV [H]

Identifier: 229917224

GI number: 229917224

Start: 1463998

End: 1464897

Strand: Reverse

Name: yoaV [H]

Synonym: EAT1b_1499

Alternate gene names: 229917224

Gene position: 1464897-1463998 (Counterclockwise)

Preceding gene: 229917226

Following gene: 229917218

Centisome position: 48.83

GC content: 49.67

Gene sequence:

>900_bases
ATGAGGAAAGAATGGTTAGGAGCACTCAGTTTGACCCTTGCGGCGAGTATATGGGGCGGGATGTATGTGGTCAGTAAATA
TGCGCTCGCATATATTGAACCGTTCACGTTCGTCTGGTTACGATACGCTGTTGCATTTATGGTCCTTTTCGTCGTTTGGT
TTCGGTTTGGACGGGAATCGATTCGACGGGCGGATTGGAAGTGGATCGGACTCGTCGGCGTCATTGGATACGTCGCTTCG
ATTTCGTTTCAATTTATCGGAACGAAGCTATCGGATGCACATACCGGCTCCCTTGTGACCGCAGCGACACCAGCTTTCAT
GGTCTTATTTGCCCGAATCTTATTGAAAGAACGACTGACTCCTGTCAAGATTGGAGCGCTTGGGCTGGCAACGGTCGGTG
TTCTCATCGTCGTTGGTTGGGAAGGGGAAGGGACGTATCGAGTAGGCAGTATCATACTTGTTCTAGCTGCCGTGACGTGG
GCACTCATGTCGATTTATGTGAAAATCGGGACACAGACCTTATCGACGTTGACACTGACGACATTTGCGATTGGAGTTGC
CTGGTTGTTGATGACCCCTTTGATGAGTATAGAGGTCATGCAAAACGGCTTTCCAGAATTGAATGGTGTCCTTTGGCTCA
GTGTCCTATATATCGGTGTCGTATCGACGGCAGGAGCGTTTTTCTTCTGGAACAAAGGACTCGAGTTGATGGATGCGAGT
GTCGGGTCACTCTTTTTCTTCTTCCAGCCTTTGGTCGGAGGGACGCTCGGATGGCTCGTCTTGAATGAAACGCTCCATCT
GAATTTTTTTATCGGTGCCGGTTGTATCATGACGGCTGTGACGTGGTCGACGCTCGCGGAACGAAGACAACAACTGCCCA
TTTCAGAACGCAATCTTTGA

Upstream 100 bases:

>100_bases
CTATGTCTTGATTGTAAGCGTTTTTCTTACGACTGACAATGAAAATAAAGGAAATGGAAGCAAGGATGTCGTATATAGTC
GCCATCGAGGAGGCGAAGAA

Downstream 100 bases:

>100_bases
CGACAAAACGGTCCCCCTCGTGTTTAGAGGGCGACCGTTTTTGATTAAAAGCCGCGATGCTCGAGCTTGTCTTGTTCGCG
TTTCATTTCGAGTTGAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS
ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW
ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS
VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL

Sequences:

>Translated_299_residues
MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS
ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW
ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS
VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL
>Mature_299_residues
MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS
ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW
ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS
VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33008; Mature: 33008

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IRRADWKWIGLVGVIGYVASISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLT
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTWALMSIYVKIGTQTLSTLTLT
CEEEHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH
VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL
HHHHHHHHHHHHCCHHHHHEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IRRADWKWIGLVGVIGYVASISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLT
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTWALMSIYVKIGTQTLSTLTLT
CEEEHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH
VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL
HHHHHHHHHHHHCCHHHHHEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]