| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yoaV [H]
Identifier: 229917224
GI number: 229917224
Start: 1463998
End: 1464897
Strand: Reverse
Name: yoaV [H]
Synonym: EAT1b_1499
Alternate gene names: 229917224
Gene position: 1464897-1463998 (Counterclockwise)
Preceding gene: 229917226
Following gene: 229917218
Centisome position: 48.83
GC content: 49.67
Gene sequence:
>900_bases ATGAGGAAAGAATGGTTAGGAGCACTCAGTTTGACCCTTGCGGCGAGTATATGGGGCGGGATGTATGTGGTCAGTAAATA TGCGCTCGCATATATTGAACCGTTCACGTTCGTCTGGTTACGATACGCTGTTGCATTTATGGTCCTTTTCGTCGTTTGGT TTCGGTTTGGACGGGAATCGATTCGACGGGCGGATTGGAAGTGGATCGGACTCGTCGGCGTCATTGGATACGTCGCTTCG ATTTCGTTTCAATTTATCGGAACGAAGCTATCGGATGCACATACCGGCTCCCTTGTGACCGCAGCGACACCAGCTTTCAT GGTCTTATTTGCCCGAATCTTATTGAAAGAACGACTGACTCCTGTCAAGATTGGAGCGCTTGGGCTGGCAACGGTCGGTG TTCTCATCGTCGTTGGTTGGGAAGGGGAAGGGACGTATCGAGTAGGCAGTATCATACTTGTTCTAGCTGCCGTGACGTGG GCACTCATGTCGATTTATGTGAAAATCGGGACACAGACCTTATCGACGTTGACACTGACGACATTTGCGATTGGAGTTGC CTGGTTGTTGATGACCCCTTTGATGAGTATAGAGGTCATGCAAAACGGCTTTCCAGAATTGAATGGTGTCCTTTGGCTCA GTGTCCTATATATCGGTGTCGTATCGACGGCAGGAGCGTTTTTCTTCTGGAACAAAGGACTCGAGTTGATGGATGCGAGT GTCGGGTCACTCTTTTTCTTCTTCCAGCCTTTGGTCGGAGGGACGCTCGGATGGCTCGTCTTGAATGAAACGCTCCATCT GAATTTTTTTATCGGTGCCGGTTGTATCATGACGGCTGTGACGTGGTCGACGCTCGCGGAACGAAGACAACAACTGCCCA TTTCAGAACGCAATCTTTGA
Upstream 100 bases:
>100_bases CTATGTCTTGATTGTAAGCGTTTTTCTTACGACTGACAATGAAAATAAAGGAAATGGAAGCAAGGATGTCGTATATAGTC GCCATCGAGGAGGCGAAGAA
Downstream 100 bases:
>100_bases CGACAAAACGGTCCCCCTCGTGTTTAGAGGGCGACCGTTTTTGATTAAAAGCCGCGATGCTCGAGCTTGTCTTGTTCGCG TTTCATTTCGAGTTGAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL
Sequences:
>Translated_299_residues MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL >Mature_299_residues MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRESIRRADWKWIGLVGVIGYVAS ISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTW ALMSIYVKIGTQTLSTLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33008; Mature: 33008
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH IRRADWKWIGLVGVIGYVASISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLT HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC PVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTWALMSIYVKIGTQTLSTLTLT CEEEHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL HHHHHHHHHHHHCCHHHHHEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGRES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH IRRADWKWIGLVGVIGYVASISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILLKERLT HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC PVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTWALMSIYVKIGTQTLSTLTLT CEEEHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLELMDAS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH VGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQLPISERNL HHHHHHHHHHHHCCHHHHHEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]