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The map label for this gene is ntdB [H]

Identifier: 229917218

GI number: 229917218

Start: 1460310

End: 1461110

Strand: Reverse

Name: ntdB [H]

Synonym: EAT1b_1493

Alternate gene names: 229917218

Gene position: 1461110-1460310 (Counterclockwise)

Preceding gene: 229917224

Following gene: 229917215

Centisome position: 48.71

GC content: 44.19

Gene sequence:

>801_bases
ATGAAGCGATTTACGAATGAGGGACACATCCTCATATGTTTTGATTTTGATGAGACCTACTTTCCTCATGCATGTACACC
GGAACAATTGGCATCCGTTCGTCGGCTCGAAGATTTTTTGGAACAATATTCCCATCGATTGTCAACGATGTGGGTGACAG
GTAGTTCACTCAAATCGCTACGTGAAAAAGTTGAACAGGCAAACCTTCGCTTTTGGCCTCACCGTATCGCTTCAAGTTTA
GGTACGGAATTGTATCATATTGACGTAGACGGAACGTTTTCTTTAGAAGAATCCTATCAAGCGTTATTCCCGAGTGATTT
TATATCTCGTGTGGAACGTGTTGCGTCACAGATTGAACAGATGCGGATTGAACTAGAAGCGCAACCGGGTTTTGGGACGA
GTCCTTGGATCCGTAGCTATTACATCCGTGACCAAATCGGGTCTTGGAGCGAAACGCTTCGCATGCTAGCTGATCAAGAA
GGTATTGCTGTCAACATCAGCCAATGCAATCCGCAAGCGGGTGATCCGATGGATGCATGGGATATTGATTTTTATCCAAT
CCATGCCGGAAAAGAATCCAGTGTTCGATATGTATGCACCACTGTTTCCTTCTTACGCAAAGAAACATATGCGTTCGGCG
ACAGTGGGAATGACCTTGGGATGTTAGCGCATGTAGGAAAAGGCTATTTAGTGAGCAATGCGACCGAACAGGCAAAACAG
ATGTATCCGGAGATGACAACAAAACCTTATGCAGAAGGGATTTTAGAAGTATTGGAATCTGATTTGTCCTCTTTCATATA
G

Upstream 100 bases:

>100_bases
CTCATTTGGCAATAAGCTCGAGAGATTCGTGAAATCATAAGATGCCTCCTTTGTTTCATTGTACTATAGGAGGAAGAGAA
AACGATAAGGAGACGATATC

Downstream 100 bases:

>100_bases
TGCATGATTTCCTCTAATGAACGGATGAGGGTCGCACGAATCGTTTCGGAATGTGGATTGAAGTGAAGACGTTGTTGCCA
AATCCGACAAAATAAATCGG

Product: sucrose-6F-phosphate phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKRFTNEGHILICFDFDETYFPHACTPEQLASVRRLEDFLEQYSHRLSTMWVTGSSLKSLREKVEQANLRFWPHRIASSL
GTELYHIDVDGTFSLEESYQALFPSDFISRVERVASQIEQMRIELEAQPGFGTSPWIRSYYIRDQIGSWSETLRMLADQE
GIAVNISQCNPQAGDPMDAWDIDFYPIHAGKESSVRYVCTTVSFLRKETYAFGDSGNDLGMLAHVGKGYLVSNATEQAKQ
MYPEMTTKPYAEGILEVLESDLSSFI

Sequences:

>Translated_266_residues
MKRFTNEGHILICFDFDETYFPHACTPEQLASVRRLEDFLEQYSHRLSTMWVTGSSLKSLREKVEQANLRFWPHRIASSL
GTELYHIDVDGTFSLEESYQALFPSDFISRVERVASQIEQMRIELEAQPGFGTSPWIRSYYIRDQIGSWSETLRMLADQE
GIAVNISQCNPQAGDPMDAWDIDFYPIHAGKESSVRYVCTTVSFLRKETYAFGDSGNDLGMLAHVGKGYLVSNATEQAKQ
MYPEMTTKPYAEGILEVLESDLSSFI
>Mature_266_residues
MKRFTNEGHILICFDFDETYFPHACTPEQLASVRRLEDFLEQYSHRLSTMWVTGSSLKSLREKVEQANLRFWPHRIASSL
GTELYHIDVDGTFSLEESYQALFPSDFISRVERVASQIEQMRIELEAQPGFGTSPWIRSYYIRDQIGSWSETLRMLADQE
GIAVNISQCNPQAGDPMDAWDIDFYPIHAGKESSVRYVCTTVSFLRKETYAFGDSGNDLGMLAHVGKGYLVSNATEQAKQ
MYPEMTTKPYAEGILEVLESDLSSFI

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 30363; Mature: 30363

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFTNEGHILICFDFDETYFPHACTPEQLASVRRLEDFLEQYSHRLSTMWVTGSSLKSL
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH
REKVEQANLRFWPHRIASSLGTELYHIDVDGTFSLEESYQALFPSDFISRVERVASQIEQ
HHHHHHCCCCCCHHHHHHHHCCEEEEEECCCEECHHHHHHHHCCHHHHHHHHHHHHHHHH
MRIELEAQPGFGTSPWIRSYYIRDQIGSWSETLRMLADQEGIAVNISQCNPQAGDPMDAW
HHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
DIDFYPIHAGKESSVRYVCTTVSFLRKETYAFGDSGNDLGMLAHVGKGYLVSNATEQAKQ
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCHHHHHHH
MYPEMTTKPYAEGILEVLESDLSSFI
HCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFTNEGHILICFDFDETYFPHACTPEQLASVRRLEDFLEQYSHRLSTMWVTGSSLKSL
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHH
REKVEQANLRFWPHRIASSLGTELYHIDVDGTFSLEESYQALFPSDFISRVERVASQIEQ
HHHHHHCCCCCCHHHHHHHHCCEEEEEECCCEECHHHHHHHHCCHHHHHHHHHHHHHHHH
MRIELEAQPGFGTSPWIRSYYIRDQIGSWSETLRMLADQEGIAVNISQCNPQAGDPMDAW
HHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
DIDFYPIHAGKESSVRYVCTTVSFLRKETYAFGDSGNDLGMLAHVGKGYLVSNATEQAKQ
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCHHHHHHH
MYPEMTTKPYAEGILEVLESDLSSFI
HCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]