| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqhL [H]
Identifier: 229917189
GI number: 229917189
Start: 1430567
End: 1430932
Strand: Reverse
Name: yqhL [H]
Synonym: EAT1b_1463
Alternate gene names: 229917189
Gene position: 1430932-1430567 (Counterclockwise)
Preceding gene: 229917190
Following gene: 229917188
Centisome position: 47.7
GC content: 47.81
Gene sequence:
>366_bases ATGTTGGACTTTCTTTTTGTGGCGGTCGTCATTGGACTTGTGTATTTCTGGTGGAGTCGTCGAAACAATGTAAAAACTGT CTCGACGGACGATTTAAAACGGAGAATCGCAGAAGAACGAAACATTCAATTGTTGGATGTGCGTGAGCCGCATGAATACC GCGGGGGACATATCAAGCAGGCGAAAAACGTACCTTTATCCGGATTCGGTAATGCTCAAGCGAAATATCCGAAAGAAAAG GAGCGTCCTGTCTATGTCATCTGTCAGAGCGGGATGCGTAGCCAACGCGCGGCAGCGATGCTGAAGAGTGCCGGATATAC CGACGTCTATTCTGTAAAAGGTGGCATGAACTTCTGGCGTGGATAA
Upstream 100 bases:
>100_bases GTCATGAACATGTGGTTTTTTTGTGAATTCATATTCATTGACTTAAATACCATAGGGGGTATAATGAGTATAAGAAATGA ATGCAAATGGAGGCGTGAAT
Downstream 100 bases:
>100_bases TAGAGGCGACTGGACGAATCGGTTCAGTCGTTTTTTTGTCATCACGTTTTCTCTTTTGCATTTTCGGGGATTCTGCTACG GTAAGGAGAGAGTGAAAGAG
Product: Rhodanese domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLDFLFVAVVIGLVYFWWSRRNNVKTVSTDDLKRRIAEERNIQLLDVREPHEYRGGHIKQAKNVPLSGFGNAQAKYPKEK ERPVYVICQSGMRSQRAAAMLKSAGYTDVYSVKGGMNFWRG
Sequences:
>Translated_121_residues MLDFLFVAVVIGLVYFWWSRRNNVKTVSTDDLKRRIAEERNIQLLDVREPHEYRGGHIKQAKNVPLSGFGNAQAKYPKEK ERPVYVICQSGMRSQRAAAMLKSAGYTDVYSVKGGMNFWRG >Mature_121_residues MLDFLFVAVVIGLVYFWWSRRNNVKTVSTDDLKRRIAEERNIQLLDVREPHEYRGGHIKQAKNVPLSGFGNAQAKYPKEK ERPVYVICQSGMRSQRAAAMLKSAGYTDVYSVKGGMNFWRG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 13913; Mature: 13913
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFLFVAVVIGLVYFWWSRRNNVKTVSTDDLKRRIAEERNIQLLDVREPHEYRGGHIKQ CHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC AKNVPLSGFGNAQAKYPKEKERPVYVICQSGMRSQRAAAMLKSAGYTDVYSVKGGMNFWR CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC G C >Mature Secondary Structure MLDFLFVAVVIGLVYFWWSRRNNVKTVSTDDLKRRIAEERNIQLLDVREPHEYRGGHIKQ CHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC AKNVPLSGFGNAQAKYPKEKERPVYVICQSGMRSQRAAAMLKSAGYTDVYSVKGGMNFWR CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]