| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mtnA [H]
Identifier: 229917160
GI number: 229917160
Start: 1401879
End: 1402913
Strand: Reverse
Name: mtnA [H]
Synonym: EAT1b_1434
Alternate gene names: 229917160
Gene position: 1402913-1401879 (Counterclockwise)
Preceding gene: 229917161
Following gene: 229917159
Centisome position: 46.77
GC content: 53.43
Gene sequence:
>1035_bases ATGAGTGTGCAAAGTATTCATTTCGATGCCGACACGGAAGTGTTGACGATTTTAGATCAGACGCTGTTGCCGCAAGAAGA GCGCTATGTCGAAGTGTTGACGCTCGAACAGGCCGAGCAGGCAATCAAGTCGCTTCAAGTTCGCGGTGCACCGGCCATCG CTTATTTCGGAGCGTTTGTCCTTGCGAAAGAAGCGTCACGTCTGCAAGACAATCCATATTTTCATCTCCAATTGAATCAA GTCGGTCAACGGTTGATTGCGACAAGACCGACCGCGGTCAACTTACAGCATGTCATCGAATCACTCCTTCGATTGAATGT GGGGGAGGACTTTGAACAGATTGCAAAAGCAATCAAGCAGCGTGCGATTGAAATCTTTGAACAAGACGTGGCTACGTATC GCACGATTGGGGAACATGCGCTCACCGTGTTACCCGCTGGTGGCAACGTATTGACGATTTGTAACGCCGGTGCCATCGCG ACGTCACGATACGGTACCGCGCTCGCGCCGTTCTATGTCGGGAAAGAGCGTGGCATCCCGTTTCGGGTGTTCGCGTCCGA AACGCGACCGCTGCTTCAAGGGGCACGGTTGACGGTATGGGAGCTCGACCGGGCGGACATCGACGTCACATTGATCACGG ATAATATGGCGGCGTGGACGATCCAGACGAAACAAATCGATGCCATCATCGTCGGGGCGGACCGCATCACCCGTACCGGT CATACGGCCAACAAGATTGGAACACTCCAGCTTGCGATTTTGGCGAAGCATTACGGCATCCCATTCTATGTGGCAGCCCC GCATTCGACGTTCGATTTAGAGGCGGACGACACGATTCAAATCGAGGAACGGGACGCCCATGAAGTGACCCATATCGGAG GACATCCAACGGCACTCGTCGGCATCACCGTCTTCAATCCGGCGTTTGATGTGACCCCACCCGAACTGATCACCGGTCTG ATCACAGAGACTGGTGTGCTCGAACCGACTGAGTCGGTCATTGTAGAACATGTAGGAGGAAACACATATGTCTAA
Upstream 100 bases:
>100_bases GGAAACGCCACGCCTTAGAGCTCGGTACGCGTCTCATCAAACAGCGCCATCAAATTCAATCCATCGATCAATTGATTCCA GTCTTGTCGGAGGTGCGCGT
Downstream 100 bases:
>100_bases AAAAATCATCTTCTTCCTGTTGACCGTCATCTTAGCACTTGCCGGATGCACGAACGAACAGGCGCAACCGAAAACGACTA CGACAACAAGTAAAACGGAA
Product: translation initiation factor, aIF-2BI family
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSVQSIHFDADTEVLTILDQTLLPQEERYVEVLTLEQAEQAIKSLQVRGAPAIAYFGAFVLAKEASRLQDNPYFHLQLNQ VGQRLIATRPTAVNLQHVIESLLRLNVGEDFEQIAKAIKQRAIEIFEQDVATYRTIGEHALTVLPAGGNVLTICNAGAIA TSRYGTALAPFYVGKERGIPFRVFASETRPLLQGARLTVWELDRADIDVTLITDNMAAWTIQTKQIDAIIVGADRITRTG HTANKIGTLQLAILAKHYGIPFYVAAPHSTFDLEADDTIQIEERDAHEVTHIGGHPTALVGITVFNPAFDVTPPELITGL ITETGVLEPTESVIVEHVGGNTYV
Sequences:
>Translated_344_residues MSVQSIHFDADTEVLTILDQTLLPQEERYVEVLTLEQAEQAIKSLQVRGAPAIAYFGAFVLAKEASRLQDNPYFHLQLNQ VGQRLIATRPTAVNLQHVIESLLRLNVGEDFEQIAKAIKQRAIEIFEQDVATYRTIGEHALTVLPAGGNVLTICNAGAIA TSRYGTALAPFYVGKERGIPFRVFASETRPLLQGARLTVWELDRADIDVTLITDNMAAWTIQTKQIDAIIVGADRITRTG HTANKIGTLQLAILAKHYGIPFYVAAPHSTFDLEADDTIQIEERDAHEVTHIGGHPTALVGITVFNPAFDVTPPELITGL ITETGVLEPTESVIVEHVGGNTYV >Mature_343_residues SVQSIHFDADTEVLTILDQTLLPQEERYVEVLTLEQAEQAIKSLQVRGAPAIAYFGAFVLAKEASRLQDNPYFHLQLNQV GQRLIATRPTAVNLQHVIESLLRLNVGEDFEQIAKAIKQRAIEIFEQDVATYRTIGEHALTVLPAGGNVLTICNAGAIAT SRYGTALAPFYVGKERGIPFRVFASETRPLLQGARLTVWELDRADIDVTLITDNMAAWTIQTKQIDAIIVGADRITRTGH TANKIGTLQLAILAKHYGIPFYVAAPHSTFDLEADDTIQIEERDAHEVTHIGGHPTALVGITVFNPAFDVTPPELITGLI TETGVLEPTESVIVEHVGGNTYV
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=350, Percent_Identity=44.2857142857143, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI23943880, Length=341, Percent_Identity=39.8826979472141, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17557462, Length=340, Percent_Identity=36.7647058823529, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17557123, Length=275, Percent_Identity=25.4545454545455, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325375, Length=402, Percent_Identity=37.3134328358209, Blast_Score=206, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6322878, Length=162, Percent_Identity=31.4814814814815, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357667, Length=355, Percent_Identity=41.1267605633803, Blast_Score=240, Evalue=9e-64, Organism=Drosophila melanogaster, GI24651647, Length=355, Percent_Identity=41.1267605633803, Blast_Score=240, Evalue=9e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 37695; Mature: 37564
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQSIHFDADTEVLTILDQTLLPQEERYVEVLTLEQAEQAIKSLQVRGAPAIAYFGAFV CCCCEEEECCCCHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHH LAKEASRLQDNPYFHLQLNQVGQRLIATRPTAVNLQHVIESLLRLNVGEDFEQIAKAIKQ HHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHH RAIEIFEQDVATYRTIGEHALTVLPAGGNVLTICNAGAIATSRYGTALAPFYVGKERGIP HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCEECCEEECCCCCCE FRVFASETRPLLQGARLTVWELDRADIDVTLITDNMAAWTIQTKQIDAIIVGADRITRTG EEEEECCCCHHHCCCEEEEEEECCCCEEEEEEECCCEEEEEEECEEEEEEEECCHHCCCC HTANKIGTLQLAILAKHYGIPFYVAAPHSTFDLEADDTIQIEERDAHEVTHIGGHPTALV CCCCCCHHEEEEEEHHHCCCEEEEECCCCEEECCCCCEEEEECCCCCCEEECCCCCEEEE GITVFNPAFDVTPPELITGLITETGVLEPTESVIVEHVGGNTYV EEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHEECCCCCCC >Mature Secondary Structure SVQSIHFDADTEVLTILDQTLLPQEERYVEVLTLEQAEQAIKSLQVRGAPAIAYFGAFV CCCEEEECCCCHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHH LAKEASRLQDNPYFHLQLNQVGQRLIATRPTAVNLQHVIESLLRLNVGEDFEQIAKAIKQ HHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHH RAIEIFEQDVATYRTIGEHALTVLPAGGNVLTICNAGAIATSRYGTALAPFYVGKERGIP HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCEECCEEECCCCCCE FRVFASETRPLLQGARLTVWELDRADIDVTLITDNMAAWTIQTKQIDAIIVGADRITRTG EEEEECCCCHHHCCCEEEEEEECCCCEEEEEEECCCEEEEEEECEEEEEEEECCHHCCCC HTANKIGTLQLAILAKHYGIPFYVAAPHSTFDLEADDTIQIEERDAHEVTHIGGHPTALV CCCCCCHHEEEEEEHHHCCCEEEEECCCCEEECCCCCEEEEECCCCCCEEECCCCCEEEE GITVFNPAFDVTPPELITGLITETGVLEPTESVIVEHVGGNTYV EEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA