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The map label for this gene is rbsB [H]

Identifier: 229917159

GI number: 229917159

Start: 1400807

End: 1401886

Strand: Reverse

Name: rbsB [H]

Synonym: EAT1b_1433

Alternate gene names: 229917159

Gene position: 1401886-1400807 (Counterclockwise)

Preceding gene: 229917160

Following gene: 229917158

Centisome position: 46.73

GC content: 51.11

Gene sequence:

>1080_bases
ATGTCTAAAAAAATCATCTTCTTCCTGTTGACCGTCATCTTAGCACTTGCCGGATGCACGAACGAACAGGCGCAACCGAA
AACGACTACGACAACAAGTAAAACGGAAACGAAAACCGTCAACGTCTCAAATGAAACACTTCCGAAAGATTTAGAAGTCG
CCCTCGTCATGCAGATGTCGATTGGGACATTCTCTTCGCAATATATCGAAGGGGTGACCGAGCAAGTCGAAGCGTTCGGT
GGCAACGTGAAAGTGTATAACGCCGAAAATGATTTGTCGAAAATGGCGAGTTATGTCGATACGGCCACGACGCAAGGAGT
CGATGTGATCTTGATTGACCACGGACGTGCCGATGCCTTAAAAGAGCCTGTTCAACGGGCGCTCGACAAAGGCATTAAAG
TTGTCGCATTCGATAACGATTTGACGAATGAAGGCGTGACGGTCATCGATCAAGACGATTATTCACTCGCATGGCGCTCG
CTCAAAGCACTCGCGGAAGATTTGGACGGGGAAGGGAACATCGTCACGATTTGGGTCGGTGGATTCACACCGATGGAACG
CCGTCATACGATTTATGATGCATTCTTGAAACGGTATCCGGGCATCCAGGAAGTCGCGAAGTTCGGTTCGGCGACGAACA
ACACGGCGCTCGATACGCAAAGCCAGATGGAGGCGATTTTGAAGAAGTACCCGGAAGGCGAAATCGATGCGGTGTTTGCG
ATGTGGGATGAGTTCGCCAAAGGGGCGAGCCGTGCCATCAAACAGGCAGGACGTGACGAGATTGCCGTTTACGGGATTGA
CTTGAGTGACGAAGACTTGCAACTCATGCAAGAAGAGGGGAGTCCGTGGAAAGTGACAGCTGCCACAGATCCAGCCGAAA
TCGGCCGCATTCAAGTCCGATACGCTTATCAAAAAGTGGTCGGGGAAGAGACGCCTTCCATTCATTCGGTCGACCCATAT
CTAGTGGACCGTGATGTCTTGCCGAATGAGCCTGTCACGATGGATGACCTTGGACAGTACGTGCCAGGTTGGGGCGAATC
GAATGCGGCATGGTCGGATTGGATGAAGGAGACAGACTGA

Upstream 100 bases:

>100_bases
GATGTGACCCCACCCGAACTGATCACCGGTCTGATCACAGAGACTGGTGTGCTCGAACCGACTGAGTCGGTCATTGTAGA
ACATGTAGGAGGAAACACAT

Downstream 100 bases:

>100_bases
TGATTCGCTTGGAACGAATCACGAAACAGTATGGTGACGTCACGGTGCTCGATCAACTATCCTTCAGTTTAAAGCCGGGA
GACATTCATGGGCTTCTCGG

Product: LacI family transcriptional regulator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSKKIIFFLLTVILALAGCTNEQAQPKTTTTTSKTETKTVNVSNETLPKDLEVALVMQMSIGTFSSQYIEGVTEQVEAFG
GNVKVYNAENDLSKMASYVDTATTQGVDVILIDHGRADALKEPVQRALDKGIKVVAFDNDLTNEGVTVIDQDDYSLAWRS
LKALAEDLDGEGNIVTIWVGGFTPMERRHTIYDAFLKRYPGIQEVAKFGSATNNTALDTQSQMEAILKKYPEGEIDAVFA
MWDEFAKGASRAIKQAGRDEIAVYGIDLSDEDLQLMQEEGSPWKVTAATDPAEIGRIQVRYAYQKVVGEETPSIHSVDPY
LVDRDVLPNEPVTMDDLGQYVPGWGESNAAWSDWMKETD

Sequences:

>Translated_359_residues
MSKKIIFFLLTVILALAGCTNEQAQPKTTTTTSKTETKTVNVSNETLPKDLEVALVMQMSIGTFSSQYIEGVTEQVEAFG
GNVKVYNAENDLSKMASYVDTATTQGVDVILIDHGRADALKEPVQRALDKGIKVVAFDNDLTNEGVTVIDQDDYSLAWRS
LKALAEDLDGEGNIVTIWVGGFTPMERRHTIYDAFLKRYPGIQEVAKFGSATNNTALDTQSQMEAILKKYPEGEIDAVFA
MWDEFAKGASRAIKQAGRDEIAVYGIDLSDEDLQLMQEEGSPWKVTAATDPAEIGRIQVRYAYQKVVGEETPSIHSVDPY
LVDRDVLPNEPVTMDDLGQYVPGWGESNAAWSDWMKETD
>Mature_358_residues
SKKIIFFLLTVILALAGCTNEQAQPKTTTTTSKTETKTVNVSNETLPKDLEVALVMQMSIGTFSSQYIEGVTEQVEAFGG
NVKVYNAENDLSKMASYVDTATTQGVDVILIDHGRADALKEPVQRALDKGIKVVAFDNDLTNEGVTVIDQDDYSLAWRSL
KALAEDLDGEGNIVTIWVGGFTPMERRHTIYDAFLKRYPGIQEVAKFGSATNNTALDTQSQMEAILKKYPEGEIDAVFAM
WDEFAKGASRAIKQAGRDEIAVYGIDLSDEDLQLMQEEGSPWKVTAATDPAEIGRIQVRYAYQKVVGEETPSIHSVDPYL
VDRDVLPNEPVTMDDLGQYVPGWGESNAAWSDWMKETD

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39617; Mature: 39486

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKIIFFLLTVILALAGCTNEQAQPKTTTTTSKTETKTVNVSNETLPKDLEVALVMQMS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEEEEEHH
IGTFSSQYIEGVTEQVEAFGGNVKVYNAENDLSKMASYVDTATTQGVDVILIDHGRADAL
HCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KEPVQRALDKGIKVVAFDNDLTNEGVTVIDQDDYSLAWRSLKALAEDLDGEGNIVTIWVG
HHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
GFTPMERRHTIYDAFLKRYPGIQEVAKFGSATNNTALDTQSQMEAILKKYPEGEIDAVFA
CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
MWDEFAKGASRAIKQAGRDEIAVYGIDLSDEDLQLMQEEGSPWKVTAATDPAEIGRIQVR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHCEEEEH
YAYQKVVGEETPSIHSVDPYLVDRDVLPNEPVTMDDLGQYVPGWGESNAAWSDWMKETD
HHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SKKIIFFLLTVILALAGCTNEQAQPKTTTTTSKTETKTVNVSNETLPKDLEVALVMQMS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEEEEEEHH
IGTFSSQYIEGVTEQVEAFGGNVKVYNAENDLSKMASYVDTATTQGVDVILIDHGRADAL
HCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KEPVQRALDKGIKVVAFDNDLTNEGVTVIDQDDYSLAWRSLKALAEDLDGEGNIVTIWVG
HHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
GFTPMERRHTIYDAFLKRYPGIQEVAKFGSATNNTALDTQSQMEAILKKYPEGEIDAVFA
CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
MWDEFAKGASRAIKQAGRDEIAVYGIDLSDEDLQLMQEEGSPWKVTAATDPAEIGRIQVR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHCEEEEH
YAYQKVVGEETPSIHSVDPYLVDRDVLPNEPVTMDDLGQYVPGWGESNAAWSDWMKETD
HHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]