| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is capK [H]
Identifier: 229917101
GI number: 229917101
Start: 1344872
End: 1346224
Strand: Reverse
Name: capK [H]
Synonym: EAT1b_1375
Alternate gene names: 229917101
Gene position: 1346224-1344872 (Counterclockwise)
Preceding gene: 229917102
Following gene: 229917100
Centisome position: 44.88
GC content: 45.16
Gene sequence:
>1353_bases ATGGCAGGGTTTGCGCTTCGTGATTTATACATGAAATCACCGATTCGATTACAACAATGGATGACGACATTGTATGGAAT GAAACTATGGCAAGAACGGTACGGACGCACATATGAGCGTGAGTTAGTCGTTTTAGCCAATCGTCCCAAAGATGGGGCAG TCGTTGCAGCCGATCAATTGAAGCGACTCAATGCGTTTCTCGAATTTTGTGCGACGAACAATGCATATTATCAAAAACTG TTTGAAGAAAACGAGATTGTTCTTCCCCTCCAATCGATGGAAGAGTTGAAGCGCATCCCGATCCTCGAAAAAGAAACAGT TCGTAAAAATCCAGACATCCATTCGAACATCAAAACAGACATTCTTGGACGGACCGGTGGAACGACAGGGACGTCCCTAC AAGTTCATTTTACGAAAGAAGACTATCAAAGACGTATGGCCCACGTTGACTTTTTCAAAGCACAACACGGGTTTGTCAGA GGAATGAAACGAGCCAGTTTTACAGGACGGAAAATTTGTAATCCGAATCAAGAAAAGCCTGTATTTTGGCGCTACAATCG ACCGCTCAATCAAATGCTATTCTCGCTCTACCATGTCAACCCTCAGACTATCCCTCATTACATCGACGCATTAAATCGAT TCAAGCCAATTGTATTAGACAGTGCACCGTCTGCCATGATTGAAATCGCGAAATACATTAAAGAAAATCAGGTTCCACTT GAATTTCAATTACTGGCTATTTTTCCGACAGCCGAAACGATTACGCCTCAAGGAAGAGCCATCTTAGAAGAGGCGTTTGG GGCCCCGGTCTTTGATCAGTACGCGTCTTCGGAAGGGGCACCGATTTTAACGGAATGTACCCATGGCAATATGCATCTCC ACCATGAAACAGGCGTGATCGAGTCGTATGGGGATCACGAGGAAATTTTAGTGACGAGCTTTACGACCCATGGGACACCG CTCGTTCGTTACCGGATTGGCGATCGGATGAAAATTGGAGAGGGGACATGTGCTTGTGGACAGGGAGGAACATTCGTCAC TTCCATTGAGGGACGCGAAAGCAATTATGTACTCACTCCGAACAAACAAAAAATCTACGAAGGAGATTTGACGACCGTTG TCCGAGTGTTACCCAACTCGGTCATCCAAACGCAGTATCGGCAACATGATTTGTATCATATCGAATTAAAATACGTCCCG GATCTTGAACGTTTCAAGCCAGAACATGAAGAGATTATGAGGAGCGAGCTTGAACTACTGTTCGGCAAAGAGGTCGTGAT TACGTTGACCGCCGTGCAATCGATTCCTCGGGGACCGAATGGAAAAGTCATTGTGATTGATAAAACCGCATAA
Upstream 100 bases:
>100_bases TGAAAGTTCTTTTACGAGATGTGAAAAGCATCAAGAAAGAAAAGAACGGAAAAGTCCGAGTCGTGAAACGACTCTACACT TAGCGAGAGGAGACTACACC
Downstream 100 bases:
>100_bases TTCCGAATCTCAGGAGGCAGATGGACATGGATAAACTCATCTCAGAATCACGTACAACACGAAAAACCATTGCCAATCGT CACGTAGCTGTTGTCGGACT
Product: Coenzyme F390 synthetase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKL FEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVR GMKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTP LVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVP DLERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA
Sequences:
>Translated_450_residues MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKL FEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVR GMKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTP LVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVP DLERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA >Mature_449_residues AGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQLKRLNAFLEFCATNNAYYQKLF EENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTDILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRG MKRASFTGRKICNPNQEKPVFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPLE FQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVIESYGDHEEILVTSFTTHGTPL VRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTPNKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPD LERFKPEHEEIMRSELELLFGKEVVITLTAVQSIPRGPNGKVIVIDKTA
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51511; Mature: 51380
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQL CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHH KRLNAFLEFCATNNAYYQKLFEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTD HHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHH ILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRGMKRASFTGRKICNPNQEKP CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCE EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVI EEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCC ESYGDHEEILVTSFTTHGTPLVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTP CCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCEECCCCCEEEEEECCCCCCEEECC NKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPDLERFKPEHEEIMRSELELL CCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHCCHHHHHHHHHHHHH FGKEVVITLTAVQSIPRGPNGKVIVIDKTA CCCEEEEEEEEHHHCCCCCCCCEEEEECCC >Mature Secondary Structure AGFALRDLYMKSPIRLQQWMTTLYGMKLWQERYGRTYERELVVLANRPKDGAVVAADQL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHH KRLNAFLEFCATNNAYYQKLFEENEIVLPLQSMEELKRIPILEKETVRKNPDIHSNIKTD HHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHH ILGRTGGTTGTSLQVHFTKEDYQRRMAHVDFFKAQHGFVRGMKRASFTGRKICNPNQEKP CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VFWRYNRPLNQMLFSLYHVNPQTIPHYIDALNRFKPIVLDSAPSAMIEIAKYIKENQVPL EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCE EFQLLAIFPTAETITPQGRAILEEAFGAPVFDQYASSEGAPILTECTHGNMHLHHETGVI EEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCC ESYGDHEEILVTSFTTHGTPLVRYRIGDRMKIGEGTCACGQGGTFVTSIEGRESNYVLTP CCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCEECCCCCEEEEEECCCCCCEEECC NKQKIYEGDLTTVVRVLPNSVIQTQYRQHDLYHIELKYVPDLERFKPEHEEIMRSELELL CCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHCCHHHHHHHHHHHHH FGKEVVITLTAVQSIPRGPNGKVIVIDKTA CCCEEEEEEEEHHHCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]