| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917097
Identifier: 229917097
GI number: 229917097
Start: 1340964
End: 1341614
Strand: Reverse
Name: 229917097
Synonym: EAT1b_1371
Alternate gene names: NA
Gene position: 1341614-1340964 (Counterclockwise)
Preceding gene: 229917098
Following gene: 229917094
Centisome position: 44.72
GC content: 47.62
Gene sequence:
>651_bases ATGCGAATTGTACTCTGCACGGGTGACCATTGGAGTTCAACACTTGTCTATCAAGCGATACGGGATTTAGGCGTCACGCA TGTGATTATGGAAGATGGTCCGACACCGACTCATGTCGACACGTGGAAAGGACTTCTGACACAATCGTACATTCGCTTCC TGACTCCCATGATGCGGCGATTCAGTCGAGAACGAATCAAGGAGTTGCAGTCACGGTATGCGTTCTGTGACGATCCGATT CCAGAACAGCGTATAGCACGTGTCGTTTCCCTACAAGACAAGAAAGCGGAACATACGATTCGACACCTACAACCTGACGT CATCATCATGTACGAAGCTGCAGAAATGAACGAACGATTTTTACAAGAGATGAACTGTCCCATCTTAACCATCACCCCAT CGATGGCAGTAGGACAACGACATGCGTATTGGGGATTCCATACCCACACATCGAGAAAAGAAGTTCAACTTTGCCAGTGG ACGAAAAAAGGATGGACCCCACTAGCGAGTGAGGTCATCTATACCGGTGGAACAGACAACTTCTCGACCTTCCCTTATAT TTATTTGGCGACGAGTCTCCCGATGTTACAAAAACATCTTCAAATAGGGTCGCAAGAAGACACCGAGCGACGACAAAAAG TCCAAGCCTGA
Upstream 100 bases:
>100_bases CGTCCGACATTAAAAGACATTCAACAAATGTTTGGTTCATTTGATGTGGCGGTCCGGGAGATGCGTCAAACCGCAAATCA GAGTGGAGGGAGATGAAAAG
Downstream 100 bases:
>100_bases GGCTTGGACTTAACTATTCGCGATACAATAGTATTGGATGGCCTCGTTATAATACGCAGCGAGCCCCGGCTCGAAGCGAT CATAAAATTCCGTGAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRIVLCTGDHWSSTLVYQAIRDLGVTHVIMEDGPTPTHVDTWKGLLTQSYIRFLTPMMRRFSRERIKELQSRYAFCDDPI PEQRIARVVSLQDKKAEHTIRHLQPDVIIMYEAAEMNERFLQEMNCPILTITPSMAVGQRHAYWGFHTHTSRKEVQLCQW TKKGWTPLASEVIYTGGTDNFSTFPYIYLATSLPMLQKHLQIGSQEDTERRQKVQA
Sequences:
>Translated_216_residues MRIVLCTGDHWSSTLVYQAIRDLGVTHVIMEDGPTPTHVDTWKGLLTQSYIRFLTPMMRRFSRERIKELQSRYAFCDDPI PEQRIARVVSLQDKKAEHTIRHLQPDVIIMYEAAEMNERFLQEMNCPILTITPSMAVGQRHAYWGFHTHTSRKEVQLCQW TKKGWTPLASEVIYTGGTDNFSTFPYIYLATSLPMLQKHLQIGSQEDTERRQKVQA >Mature_216_residues MRIVLCTGDHWSSTLVYQAIRDLGVTHVIMEDGPTPTHVDTWKGLLTQSYIRFLTPMMRRFSRERIKELQSRYAFCDDPI PEQRIARVVSLQDKKAEHTIRHLQPDVIIMYEAAEMNERFLQEMNCPILTITPSMAVGQRHAYWGFHTHTSRKEVQLCQW TKKGWTPLASEVIYTGGTDNFSTFPYIYLATSLPMLQKHLQIGSQEDTERRQKVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25157; Mature: 25157
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVLCTGDHWSSTLVYQAIRDLGVTHVIMEDGPTPTHVDTWKGLLTQSYIRFLTPMMRR CEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FSRERIKELQSRYAFCDDPIPEQRIARVVSLQDKKAEHTIRHLQPDVIIMYEAAEMNERF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH LQEMNCPILTITPSMAVGQRHAYWGFHTHTSRKEVQLCQWTKKGWTPLASEVIYTGGTDN HHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEECCCCC FSTFPYIYLATSLPMLQKHLQIGSQEDTERRQKVQA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MRIVLCTGDHWSSTLVYQAIRDLGVTHVIMEDGPTPTHVDTWKGLLTQSYIRFLTPMMRR CEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FSRERIKELQSRYAFCDDPIPEQRIARVVSLQDKKAEHTIRHLQPDVIIMYEAAEMNERF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH LQEMNCPILTITPSMAVGQRHAYWGFHTHTSRKEVQLCQWTKKGWTPLASEVIYTGGTDN HHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEECCCCC FSTFPYIYLATSLPMLQKHLQIGSQEDTERRQKVQA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA