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The map label for this gene is yugT [H]

Identifier: 229917094

GI number: 229917094

Start: 1337758

End: 1339464

Strand: Reverse

Name: yugT [H]

Synonym: EAT1b_1368

Alternate gene names: 229917094

Gene position: 1339464-1337758 (Counterclockwise)

Preceding gene: 229917097

Following gene: 229917093

Centisome position: 44.65

GC content: 49.56

Gene sequence:

>1707_bases
ATGCAACTTTTACAACGAGAACAACAACAGACACAAACGCTTAAACGCAACTGGTGGAAAGAAGCCGTCGCCTATCAGAT
TTATCCGCGTAGCTTTTATGACGCGAACGGAGACGGAATTGGAGATATTCAAGGAATCATTGATAAGCTCGACTATTTGA
AAGACCTTGGCATTGACGTCATCTGGATTTGCCCGATGTACAAATCGCCAAACGATGATAACGGGTATGATATTAGTGAC
TACCAGGACATCATGGACGAATTCGGTACGATGGAAGACTTCGACCGCTTATTGGACGAGGTGCATCAGCGCGGTATGAA
ACTGTTGCTCGACCTCGTCGTCAACCATACGTCGGATGAGCACCCTTGGTTCATTGAATCGAAGAGCTCAAAAGACAATC
CGAAGCGCGACTGGTATATCTGGCGTGACGGAAAACCGGACGGATCGAAGCCGAACAACTGGGAATCCATCTTTGGCGGC
TCGGCTTGGGAGTTCGATGAAGCGACGGAGCAATACTACTTGCACGTCTTCTCGAAGAAACAGCCAGACCTCAACTGGGA
AAACGCGGAGATGCGTACAGCCGTATACGACATGATTAACTGGTGGCTCGAAAAAGGAATCGACGGGTTCCGTGTCGATG
CCATCAGCCACATCCGCAAGAATCCGACGTTCGCCGACTTGCCGAACCCGAACGACCTCGACTTTGTACCGTCATTCGAG
ATGCACATGAACGTGGACGGGATTCACGACTATTTAGAAGAACTTCGTGACGAGACGTTCAATAAGCATGACATCATGAC
GGTCGGTGAAGCGAACGGGGTATCGCCTGACGATGCGCACCTTTGGGTCGGTGAAAAAGAAGGGAAGATGAACATGGTCT
TCCAATTCGAACACATGGACCTATGGAGTGAAGATGCCGATTCGAAACTCGATGTCGTTCACTTGAAGAACGTGTTGACG
AAATGGCAAAAAGGACTTGAAGCCGACGGATGGAACGCACTTTACGTCGAAAACCATGACCAGACACGTACGGTCTCGAA
GTGGGGAGACGACGAGCGTTACTGGAAAGAAAGTGCCAAGTCGATTGCGATGATGTACTTCCTCATGCAAGGGACGCCGT
TCATCTATCAAGGTCAAGAAATCGGGATGACGAACGTCAAATTCGATTCAATCGACCAATATGATGACATCGCGACACGC
AACCGCTACTATATCGGCGTCGAGCAAGGGAAGAGTCATGACGAGATGATGCGCATCACGTGGAACTCATCACGCGACAA
CACACGCACACCGATGCAGTGGAGTGATGCTCCGAACGCTGGCTTCACGTTCGCAGAGAAGCCATGGGTCGGCATCAATC
CGAACTATACGGATATCAACGTCGAATCACAGCTTGAAGATGAGGACTCCATCTTTAATTTCTATAAAGAGATGATTCAA
CTTCGTAAAGACGATGAGACGTTTGTATACGGGGCGTATGATGTCGTCTTGCCGGATCACCCGGAAGTCTATGCGTATAC
GCGTACGCTCGGTGACACGCAGTACCTTGTCGTCACGAACTTGACGGCGAAAGAGACGATGTTCGATATGGACCAGACAC
TTCGTGCGAAAGATGTCGTCTTGAGCAACATGCCGGTTGAAGGCGATGCGGAATCGTCGCTCCTTCACTTGAAACCGTTC
GAAGGTCGCGTGTATAAAATCAGCTAA

Upstream 100 bases:

>100_bases
TCGTGCAAACGATTGCGCTAATGATATAAAGTTCACAGCACGAATAAGATAAGTATAAATGATGAGCAGTGAGTTTTGGG
ATAAGGAGTATCTAGATCAC

Downstream 100 bases:

>100_bases
TGTTTCAGAACTCCAAGGTCGTGGACGAAAATTCGTCTACGGCCTTTTTTGTTGGAAAAAGGGGATAACGGCGACTCATG
CGAACTCCTTATAGGGAGAT

Product: alpha amylase catalytic region

Products: NA

Alternate protein names: Oligosaccharide alpha-1,6-glucosidase 3; Sucrase-isomaltase 3; Isomaltase 3 [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MQLLQREQQQTQTLKRNWWKEAVAYQIYPRSFYDANGDGIGDIQGIIDKLDYLKDLGIDVIWICPMYKSPNDDNGYDISD
YQDIMDEFGTMEDFDRLLDEVHQRGMKLLLDLVVNHTSDEHPWFIESKSSKDNPKRDWYIWRDGKPDGSKPNNWESIFGG
SAWEFDEATEQYYLHVFSKKQPDLNWENAEMRTAVYDMINWWLEKGIDGFRVDAISHIRKNPTFADLPNPNDLDFVPSFE
MHMNVDGIHDYLEELRDETFNKHDIMTVGEANGVSPDDAHLWVGEKEGKMNMVFQFEHMDLWSEDADSKLDVVHLKNVLT
KWQKGLEADGWNALYVENHDQTRTVSKWGDDERYWKESAKSIAMMYFLMQGTPFIYQGQEIGMTNVKFDSIDQYDDIATR
NRYYIGVEQGKSHDEMMRITWNSSRDNTRTPMQWSDAPNAGFTFAEKPWVGINPNYTDINVESQLEDEDSIFNFYKEMIQ
LRKDDETFVYGAYDVVLPDHPEVYAYTRTLGDTQYLVVTNLTAKETMFDMDQTLRAKDVVLSNMPVEGDAESSLLHLKPF
EGRVYKIS

Sequences:

>Translated_568_residues
MQLLQREQQQTQTLKRNWWKEAVAYQIYPRSFYDANGDGIGDIQGIIDKLDYLKDLGIDVIWICPMYKSPNDDNGYDISD
YQDIMDEFGTMEDFDRLLDEVHQRGMKLLLDLVVNHTSDEHPWFIESKSSKDNPKRDWYIWRDGKPDGSKPNNWESIFGG
SAWEFDEATEQYYLHVFSKKQPDLNWENAEMRTAVYDMINWWLEKGIDGFRVDAISHIRKNPTFADLPNPNDLDFVPSFE
MHMNVDGIHDYLEELRDETFNKHDIMTVGEANGVSPDDAHLWVGEKEGKMNMVFQFEHMDLWSEDADSKLDVVHLKNVLT
KWQKGLEADGWNALYVENHDQTRTVSKWGDDERYWKESAKSIAMMYFLMQGTPFIYQGQEIGMTNVKFDSIDQYDDIATR
NRYYIGVEQGKSHDEMMRITWNSSRDNTRTPMQWSDAPNAGFTFAEKPWVGINPNYTDINVESQLEDEDSIFNFYKEMIQ
LRKDDETFVYGAYDVVLPDHPEVYAYTRTLGDTQYLVVTNLTAKETMFDMDQTLRAKDVVLSNMPVEGDAESSLLHLKPF
EGRVYKIS
>Mature_568_residues
MQLLQREQQQTQTLKRNWWKEAVAYQIYPRSFYDANGDGIGDIQGIIDKLDYLKDLGIDVIWICPMYKSPNDDNGYDISD
YQDIMDEFGTMEDFDRLLDEVHQRGMKLLLDLVVNHTSDEHPWFIESKSSKDNPKRDWYIWRDGKPDGSKPNNWESIFGG
SAWEFDEATEQYYLHVFSKKQPDLNWENAEMRTAVYDMINWWLEKGIDGFRVDAISHIRKNPTFADLPNPNDLDFVPSFE
MHMNVDGIHDYLEELRDETFNKHDIMTVGEANGVSPDDAHLWVGEKEGKMNMVFQFEHMDLWSEDADSKLDVVHLKNVLT
KWQKGLEADGWNALYVENHDQTRTVSKWGDDERYWKESAKSIAMMYFLMQGTPFIYQGQEIGMTNVKFDSIDQYDDIATR
NRYYIGVEQGKSHDEMMRITWNSSRDNTRTPMQWSDAPNAGFTFAEKPWVGINPNYTDINVESQLEDEDSIFNFYKEMIQ
LRKDDETFVYGAYDVVLPDHPEVYAYTRTLGDTQYLVVTNLTAKETMFDMDQTLRAKDVVLSNMPVEGDAESSLLHLKPF
EGRVYKIS

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=536, Percent_Identity=30.9701492537313, Blast_Score=254, Evalue=1e-67,
Organism=Escherichia coli, GI1790687, Length=550, Percent_Identity=40.7272727272727, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1786604, Length=525, Percent_Identity=22.4761904761905, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1789995, Length=461, Percent_Identity=22.7765726681128, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565753, Length=542, Percent_Identity=26.7527675276753, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI25147709, Length=495, Percent_Identity=24.040404040404, Blast_Score=132, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6322245, Length=576, Percent_Identity=39.4097222222222, Blast_Score=412, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6319776, Length=582, Percent_Identity=39.5189003436426, Blast_Score=400, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6321731, Length=582, Percent_Identity=39.3470790378007, Blast_Score=399, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6321726, Length=579, Percent_Identity=38.3419689119171, Blast_Score=391, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6324416, Length=579, Percent_Identity=38.5146804835924, Blast_Score=389, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6322241, Length=582, Percent_Identity=38.3161512027491, Blast_Score=386, Evalue=1e-108,
Organism=Saccharomyces cerevisiae, GI6322021, Length=582, Percent_Identity=38.3161512027491, Blast_Score=386, Evalue=1e-108,
Organism=Drosophila melanogaster, GI24583747, Length=537, Percent_Identity=35.0093109869646, Blast_Score=303, Evalue=3e-82,
Organism=Drosophila melanogaster, GI24583749, Length=537, Percent_Identity=35.0093109869646, Blast_Score=302, Evalue=4e-82,
Organism=Drosophila melanogaster, GI24583745, Length=601, Percent_Identity=33.2778702163062, Blast_Score=292, Evalue=3e-79,
Organism=Drosophila melanogaster, GI221330053, Length=542, Percent_Identity=33.210332103321, Blast_Score=281, Evalue=7e-76,
Organism=Drosophila melanogaster, GI24586593, Length=594, Percent_Identity=33.3333333333333, Blast_Score=278, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24586599, Length=557, Percent_Identity=31.4183123877917, Blast_Score=277, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24586589, Length=540, Percent_Identity=33.5185185185185, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24586597, Length=572, Percent_Identity=31.4685314685315, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24586591, Length=491, Percent_Identity=34.0122199592668, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24586587, Length=513, Percent_Identity=32.5536062378168, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI45549022, Length=584, Percent_Identity=30.3082191780822, Blast_Score=255, Evalue=7e-68,
Organism=Drosophila melanogaster, GI281360393, Length=539, Percent_Identity=30.9833024118738, Blast_Score=205, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.10 [H]

Molecular weight: Translated: 66502; Mature: 66502

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLQREQQQTQTLKRNWWKEAVAYQIYPRSFYDANGDGIGDIQGIIDKLDYLKDLGIDV
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
IWICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDRLLDEVHQRGMKLLLDLVVNHTSDE
EEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HPWFIESKSSKDNPKRDWYIWRDGKPDGSKPNNWESIFGGSAWEFDEATEQYYLHVFSKK
CCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHEEEEECCC
QPDLNWENAEMRTAVYDMINWWLEKGIDGFRVDAISHIRKNPTFADLPNPNDLDFVPSFE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
MHMNVDGIHDYLEELRDETFNKHDIMTVGEANGVSPDDAHLWVGEKEGKMNMVFQFEHMD
EEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCC
LWSEDADSKLDVVHLKNVLTKWQKGLEADGWNALYVENHDQTRTVSKWGDDERYWKESAK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHH
SIAMMYFLMQGTPFIYQGQEIGMTNVKFDSIDQYDDIATRNRYYIGVEQGKSHDEMMRIT
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEE
WNSSRDNTRTPMQWSDAPNAGFTFAEKPWVGINPNYTDINVESQLEDEDSIFNFYKEMIQ
ECCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
LRKDDETFVYGAYDVVLPDHPEVYAYTRTLGDTQYLVVTNLTAKETMFDMDQTLRAKDVV
HCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
LSNMPVEGDAESSLLHLKPFEGRVYKIS
HCCCCCCCCCCCCEEEEECCCCEEEEEC
>Mature Secondary Structure
MQLLQREQQQTQTLKRNWWKEAVAYQIYPRSFYDANGDGIGDIQGIIDKLDYLKDLGIDV
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
IWICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDRLLDEVHQRGMKLLLDLVVNHTSDE
EEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HPWFIESKSSKDNPKRDWYIWRDGKPDGSKPNNWESIFGGSAWEFDEATEQYYLHVFSKK
CCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHEEEEECCC
QPDLNWENAEMRTAVYDMINWWLEKGIDGFRVDAISHIRKNPTFADLPNPNDLDFVPSFE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
MHMNVDGIHDYLEELRDETFNKHDIMTVGEANGVSPDDAHLWVGEKEGKMNMVFQFEHMD
EEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCC
LWSEDADSKLDVVHLKNVLTKWQKGLEADGWNALYVENHDQTRTVSKWGDDERYWKESAK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHH
SIAMMYFLMQGTPFIYQGQEIGMTNVKFDSIDQYDDIATRNRYYIGVEQGKSHDEMMRIT
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEE
WNSSRDNTRTPMQWSDAPNAGFTFAEKPWVGINPNYTDINVESQLEDEDSIFNFYKEMIQ
ECCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
LRKDDETFVYGAYDVVLPDHPEVYAYTRTLGDTQYLVVTNLTAKETMFDMDQTLRAKDVV
HCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
LSNMPVEGDAESSLLHLKPFEGRVYKIS
HCCCCCCCCCCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]