| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ydjZ [C]
Identifier: 229917082
GI number: 229917082
Start: 1325645
End: 1326487
Strand: Reverse
Name: ydjZ [C]
Synonym: EAT1b_1356
Alternate gene names: 229917082
Gene position: 1326487-1325645 (Counterclockwise)
Preceding gene: 229917083
Following gene: 229917081
Centisome position: 44.22
GC content: 51.48
Gene sequence:
>843_bases ATGAAAGAACGACATTCGATTTATCTTGGATATGGATTGGGGCTTGTCGCGCTCAGTCTGTTGCCGTTCGTCGTCTTGCC TTCCCTCTTACTGCCGTACCAGCTCGGTTGGACGGGCATTGTCTTACTCGCTCTCTCGGTCGGGTTACTACGGGCGATTC GGGACGGCTCGAATGTCATTTTGAAACAGATGTGGAAGATCACGTTCTCGCTCTTCTTAATTTTCGTTCTCGTCTATTAT GTCTCGTTCGGACTCGTCCTTTATGACACATACGGGTTGGATCGTCTATTAGCACAATATGAACGACAGGCGGTCTGGGT GTTTGCGGCATTTAGCTTTTTACAACCGATTGCCTTGCCGGTCCCGGAAGCGGTCAGTGTGCCGATTGGGAGTGTCGCGC TCGGACCGTTTCGTGCGGCTTTAGTCGGAAGCATCTCGACTACGCTTGGCATCTTTGTCATGTATGGGTTGGCCCGGTTT GGCCGAGGACGCATGATTCGTTGGGTCGATGAAGAGAAACTGAAGACATACGATCGATATGTCGATCGGTACGGTCTTGG TGTATTGCTCGTGTTGTTCATCATTCCGATTTTGCCGGATGAGGTCATCTGTCTCGCTGCTGGGTTTAGTCGCGTGCCAT TCCCGCGTTTTGCGGGCATCGCGTTCGGGGCAAAACTCGTCACGTCGTTCGGGCTTGCCTACTCTGTCTCCATCGGACAA TTGTTTATGACCGATTCGAGTCCCATTGCCATCGCCTCTGTCATGGCAAGTGTAGTCGTCTTGATTCTCGCGTTCGTTTG GCGCAAACGAAAAAAAGGGGATTCGAACGGGACACAAGAATAA
Upstream 100 bases:
>100_bases TTCTACGTCAAAAGCATGAGAGGGAAGGTGCCCTCGGCAGGATACATCCCCTTCACTTTCTGGGTACACTAGAAGTAGAA CGGGGAGAGGGTGATGGCTC
Downstream 100 bases:
>100_bases AGTAAAGACGATCTATAGAGAGGAAGACAAGATGCGACAAGACAATGAAGTGGTCATTCGACCGATTGAAAAACAAGACT TAGTCCGACTATGGGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE
Sequences:
>Translated_280_residues MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE >Mature_280_residues MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVILKQMWKITFSLFLIFVLVYY VSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALPVPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARF GRGRMIRWVDEEKLKTYDRYVDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30876; Mature: 30876
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LKQMWKITFSLFLIFVLVYYVSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARFGRGRMIRWVDEEKLKTYDRY CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH VDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCE LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKERHSIYLGYGLGLVALSLLPFVVLPSLLLPYQLGWTGIVLLALSVGLLRAIRDGSNVI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LKQMWKITFSLFLIFVLVYYVSFGLVLYDTYGLDRLLAQYERQAVWVFAAFSFLQPIALP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPEAVSVPIGSVALGPFRAALVGSISTTLGIFVMYGLARFGRGRMIRWVDEEKLKTYDRY CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH VDRYGLGVLLVLFIIPILPDEVICLAAGFSRVPFPRFAGIAFGAKLVTSFGLAYSVSIGQ HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCE LFMTDSSPIAIASVMASVVVLILAFVWRKRKKGDSNGTQE EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA