Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is tal

Identifier: 229917074

GI number: 229917074

Start: 1317792

End: 1318442

Strand: Reverse

Name: tal

Synonym: EAT1b_1348

Alternate gene names: 229917074

Gene position: 1318442-1317792 (Counterclockwise)

Preceding gene: 229917075

Following gene: 229917073

Centisome position: 43.95

GC content: 49.16

Gene sequence:

>651_bases
ATGCGTTTTTTCATTGACACAGCAAATGTGGAAGACATTAAAAAAGCTCATCAAATGGGCGTCATTGGAGGCGTGACGAC
GAATCCATCGCTCGTCGCCAAAGAAGGTGTCGATTTCCATACAAGACTTCGTGAAATCTGTGAGATCGTCGGGGATCTCT
CGGTCAGCGCCGAAGTTATTGCACTTGATGCGCCGGGTATGGTGGAAGAAGGAAAGGAACTTGCCGCCATCGCGCCGAAT
ATTACGGTAAAGGTACCGATGACACCAGCGGGGATGGAAGCGGTAAAACAGTTCAAAGAGCTTGGGATCAAGACGAATGT
CACGCTCATCTTTAACGCCAACCAGGCGTTACTTGCGGCACGCGCCGGAGCATCATACGTTTCTCCATTCATCGGACGCT
TGGATGACATCGGACAAGATGGGCTCGATTTAGTGGAAACTATTGCGAACATCTTTGCAATCCATGGCATCGAGACAGAA
ATCATCGCAGCATCTGTGCGTCACCCGGTTCACGTGACAAAAGCTGCACTTCTCGGGGCTGACATTGCGACAGTCCCTTA
CAAAGTCATCGAACAGATGATGAAACATCCGCTCACAGACAAAGGTATTGAGCAGTTCTTAGCGGATTGGAACAACGCTC
AATCCAAATAA

Upstream 100 bases:

>100_bases
ATATCACCGTTTGTCGAATCTGACAAAGGGAGTAGTAATTCGACTAGTCTTTCCTCATAATAGAGATTGTAAGCGATCAC
AAATTAAGGAGGAGACACAT

Downstream 100 bases:

>100_bases
GTCCGTCGTAGAAAGGTTTTGATCAGCGTGGAAATTCTCCATATCGTTGGGCAGCAAAAATTAGAAGGAACCGTCGAGAT
TAGCGGGGCGAAACAGAGTG

Product: transaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN
ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE
IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK

Sequences:

>Translated_216_residues
MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN
ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE
IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK
>Mature_216_residues
MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVIALDAPGMVEEGKELAAIAPN
ITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAARAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETE
IIAASVRHPVHVTKAALLGADIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily

Homologues:

Organism=Escherichia coli, GI1790382, Length=214, Percent_Identity=37.8504672897196, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI87081788, Length=214, Percent_Identity=34.1121495327103, Blast_Score=134, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6321480, Length=186, Percent_Identity=27.9569892473118, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_EXISA (C4KYW2)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002885720.1
- ProteinModelPortal:   C4KYW2
- GeneID:   7870316
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_1348
- OMA:   PNITVKI
- ProtClustDB:   CLSK2489937
- GO:   GO:0005737
- HAMAP:   MF_00494
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- TIGRFAMs:   TIGR00875

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 23197; Mature: 23197

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 84-84

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVI
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEE
ALDAPGMVEEGKELAAIAPNITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAA
EECCCCHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
RAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETEIIAASVRHPVHVTKAALLGA
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC
DIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK
CHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRFFIDTANVEDIKKAHQMGVIGGVTTNPSLVAKEGVDFHTRLREICEIVGDLSVSAEVI
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEE
ALDAPGMVEEGKELAAIAPNITVKVPMTPAGMEAVKQFKELGIKTNVTLIFNANQALLAA
EECCCCHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
RAGASYVSPFIGRLDDIGQDGLDLVETIANIFAIHGIETEIIAASVRHPVHVTKAALLGA
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC
DIATVPYKVIEQMMKHPLTDKGIEQFLADWNNAQSK
CHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA