Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917059

Identifier: 229917059

GI number: 229917059

Start: 1304421

End: 1304963

Strand: Reverse

Name: 229917059

Synonym: EAT1b_1333

Alternate gene names: NA

Gene position: 1304963-1304421 (Counterclockwise)

Preceding gene: 229917060

Following gene: 229917051

Centisome position: 43.5

GC content: 53.22

Gene sequence:

>543_bases
GTGAGTCAAATGAAGACGGAACTTCTCGGATTTTTGACGGAGCTTCACGAACGGTTCCCGTTGAATGATGAGCGCATTCT
CGTCATCGGATGCTCGACGAGTGAAGTGCTCGGAAAAACGATTGGGAAGGCAGGTTCCAATGATGTCGCAAGCGAATTGA
TGGAAGCATTCCTTGAATTTAGAGAGAAGACAGGTGTCCATTTGGCGTTTCAAGGGTGTGAGCATATCAATCGTGCCCTC
ACCGTTGAGCGCCGGACACTCAAACAGTTCGGCCTCACTGAAGTGACGGTCGTCCCGGTCCGTTCCGCGGGCGGGGCGAT
GTCGGAGAAGGCGTATGCGAACTTCGAGGAGCCATGTGTCGTCGAATCGATTCAAGCAGATGCCGGGATTGATATCGGCT
CGACATTAATTGGGATGCATTTGAAGCCGGTCGCCATTCCGGTCCGGTTGTCATCGAAGCATCTCGGCGAGGCGTACGTC
ACGTTTGCGGTCACGAGACCGAAACTGATTGGTGGGCCAAGGGCTCAGTATTCGGCAAATTAA

Upstream 100 bases:

>100_bases
CTGGTCTTGCACTCGACTTGGTGACGACGTGGCTCGATACGGACTTTGAAGGCGGTCGCCATTCAAACCGTGTCGACAAG
ATGAGTGCTTACGAATCGAA

Downstream 100 bases:

>100_bases
AAGAACTCCTACCGATTTTCATCGGTAGGAGTTCTTTTAATTTTGTGCATGAGGCTTTAAGTGTCTAACCCAATAATACA
TTCCTTGCAATAGGACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSQMKTELLGFLTELHERFPLNDERILVIGCSTSEVLGKTIGKAGSNDVASELMEAFLEFREKTGVHLAFQGCEHINRAL
TVERRTLKQFGLTEVTVVPVRSAGGAMSEKAYANFEEPCVVESIQADAGIDIGSTLIGMHLKPVAIPVRLSSKHLGEAYV
TFAVTRPKLIGGPRAQYSAN

Sequences:

>Translated_180_residues
MSQMKTELLGFLTELHERFPLNDERILVIGCSTSEVLGKTIGKAGSNDVASELMEAFLEFREKTGVHLAFQGCEHINRAL
TVERRTLKQFGLTEVTVVPVRSAGGAMSEKAYANFEEPCVVESIQADAGIDIGSTLIGMHLKPVAIPVRLSSKHLGEAYV
TFAVTRPKLIGGPRAQYSAN
>Mature_179_residues
SQMKTELLGFLTELHERFPLNDERILVIGCSTSEVLGKTIGKAGSNDVASELMEAFLEFREKTGVHLAFQGCEHINRALT
VERRTLKQFGLTEVTVVPVRSAGGAMSEKAYANFEEPCVVESIQADAGIDIGSTLIGMHLKPVAIPVRLSSKHLGEAYVT
FAVTRPKLIGGPRAQYSAN

Specific function: Unknown

COG id: COG4475

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0340 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006340
- ProDom:   PD102102 [H]

Pfam domain/function: PF04260 DUF436 [H]

EC number: NA

Molecular weight: Translated: 19562; Mature: 19431

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMKTELLGFLTELHERFPLNDERILVIGCSTSEVLGKTIGKAGSNDVASELMEAFLEF
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
REKTGVHLAFQGCEHINRALTVERRTLKQFGLTEVTVVPVRSAGGAMSEKAYANFEEPCV
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCHH
VESIQADAGIDIGSTLIGMHLKPVAIPVRLSSKHLGEAYVTFAVTRPKLIGGPRAQYSAN
HHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCHHCCCCCCCCCCC
>Mature Secondary Structure 
SQMKTELLGFLTELHERFPLNDERILVIGCSTSEVLGKTIGKAGSNDVASELMEAFLEF
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
REKTGVHLAFQGCEHINRALTVERRTLKQFGLTEVTVVPVRSAGGAMSEKAYANFEEPCV
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCHH
VESIQADAGIDIGSTLIGMHLKPVAIPVRLSSKHLGEAYVTFAVTRPKLIGGPRAQYSAN
HHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA