Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917057

Identifier: 229917057

GI number: 229917057

Start: 1302524

End: 1303231

Strand: Direct

Name: 229917057

Synonym: EAT1b_1331

Alternate gene names: NA

Gene position: 1302524-1303231 (Clockwise)

Preceding gene: 229917056

Following gene: 229917058

Centisome position: 43.42

GC content: 45.9

Gene sequence:

>708_bases
ATGAAATCCGTATTATTGGTCGTATCCAACCCAACTGTCTCGACCACAACAAATTGGCCAGTCGGTTTTTGGTTATCTGA
ATTGACGCACCCGTATGATGTGTTGAGTGCAACAGGTCATCAACTGACGATTGCTAGTCCAGACGGTGGCAAAGTCGAGT
GGGATGCGCTGAGCGATCCGACACATGAAAGTGGTTACTCGAAACATGATACGTTGTCTCTCAAGTATCTAGACGATGCT
GATTTCCTTGCTTTGCTAGAAAATACGCCAAAAATTAGTGATCTCGACCTTTCCGGTTTCGATGCGATTCTCGTTGCCGG
CGGACAGGCACCCATGTTTACGTTCCAAGATGCCGACTCATTAAAAGAAGCATTCGAAGCGTTCTACGCAAGCGGAAAAC
CTTCTATCGCCCTTTGCCACGGAACGAGTTTATTGTTATACCTGCAAGAGGAAAATCGTCCATTCGTTGAAGGTAAAGTG
ATGACAGGATTTACAAACGAAGAAGAAGATCAGGCCGATGCATCCGTAGGAATGAAAGTCATGCCATTCCGAATCGAAGA
AGAAGCGATCAAGTTGGGCGCTCATTTCAAAAAAGCTGAACCTTGGACACCATACGTCGTTCGAGATGGTCATTTAATCA
CTGGTCAGCAACAAGAATCTGGCCAAGCTGTCGCAGAAGAACTCGTTCGCTACTTTGAAGGTACATGA

Upstream 100 bases:

>100_bases
AACAGAGTCACTCACCTAAAAGTGCGTACTTGTCCTCCTTTGTATAGCTGATACGATTGAAGAAAGTCATCGTATTCACC
TAACGAAGGAGGAATTTTTT

Downstream 100 bases:

>100_bases
CGAGGGAGGAGATGACATGAGTGAGTGGTCTCGACCACATGTTCATTCAACCGAAGGACATCGACAAGCTTCCTGGATCG
AACTCTTTTTCGACCTTGTG

Product: ThiJ/PfpI domain protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase/Amidase; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKSVLLVVSNPTVSTTTNWPVGFWLSELTHPYDVLSATGHQLTIASPDGGKVEWDALSDPTHESGYSKHDTLSLKYLDDA
DFLALLENTPKISDLDLSGFDAILVAGGQAPMFTFQDADSLKEAFEAFYASGKPSIALCHGTSLLLYLQEENRPFVEGKV
MTGFTNEEEDQADASVGMKVMPFRIEEEAIKLGAHFKKAEPWTPYVVRDGHLITGQQQESGQAVAEELVRYFEGT

Sequences:

>Translated_235_residues
MKSVLLVVSNPTVSTTTNWPVGFWLSELTHPYDVLSATGHQLTIASPDGGKVEWDALSDPTHESGYSKHDTLSLKYLDDA
DFLALLENTPKISDLDLSGFDAILVAGGQAPMFTFQDADSLKEAFEAFYASGKPSIALCHGTSLLLYLQEENRPFVEGKV
MTGFTNEEEDQADASVGMKVMPFRIEEEAIKLGAHFKKAEPWTPYVVRDGHLITGQQQESGQAVAEELVRYFEGT
>Mature_235_residues
MKSVLLVVSNPTVSTTTNWPVGFWLSELTHPYDVLSATGHQLTIASPDGGKVEWDALSDPTHESGYSKHDTLSLKYLDDA
DFLALLENTPKISDLDLSGFDAILVAGGQAPMFTFQDADSLKEAFEAFYASGKPSIALCHGTSLLLYLQEENRPFVEGKV
MTGFTNEEEDQADASVGMKVMPFRIEEEAIKLGAHFKKAEPWTPYVVRDGHLITGQQQESGQAVAEELVRYFEGT

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=228, Percent_Identity=25.8771929824561, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324967, Length=203, Percent_Identity=26.1083743842365, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324975, Length=203, Percent_Identity=26.1083743842365, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323984, Length=203, Percent_Identity=25.615763546798, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25808; Mature: 25808

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVLLVVSNPTVSTTTNWPVGFWLSELTHPYDVLSATGHQLTIASPDGGKVEWDALSDP
CCEEEEEEECCCEECCCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCEEEECCCCCC
THESGYSKHDTLSLKYLDDADFLALLENTPKISDLDLSGFDAILVAGGQAPMFTFQDADS
CCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHH
LKEAFEAFYASGKPSIALCHGTSLLLYLQEENRPFVEGKVMTGFTNEEEDQADASVGMKV
HHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCEEE
MPFRIEEEAIKLGAHFKKAEPWTPYVVRDGHLITGQQQESGQAVAEELVRYFEGT
EEEEEHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSVLLVVSNPTVSTTTNWPVGFWLSELTHPYDVLSATGHQLTIASPDGGKVEWDALSDP
CCEEEEEEECCCEECCCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCEEEECCCCCC
THESGYSKHDTLSLKYLDDADFLALLENTPKISDLDLSGFDAILVAGGQAPMFTFQDADS
CCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHH
LKEAFEAFYASGKPSIALCHGTSLLLYLQEENRPFVEGKVMTGFTNEEEDQADASVGMKV
HHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCEEE
MPFRIEEEAIKLGAHFKKAEPWTPYVVRDGHLITGQQQESGQAVAEELVRYFEGT
EEEEEHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA