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The map label for this gene is ydeP [H]

Identifier: 229917056

GI number: 229917056

Start: 1302104

End: 1302442

Strand: Direct

Name: ydeP [H]

Synonym: EAT1b_1330

Alternate gene names: 229917056

Gene position: 1302104-1302442 (Clockwise)

Preceding gene: 229917055

Following gene: 229917057

Centisome position: 43.4

GC content: 43.36

Gene sequence:

>339_bases
ATGGCTACTTTTTTGTATCAAGATCGAACATTTGAATGCCCCGTACAATTGAGCATGAATGTCATTATGGGGAAATGGAA
AGTGCTTGTGTTATGGCACGTGTTACGCCGCCCTCGTCGTTACGGTGAACTGAAGCGATTGATTCAAGGAATCAGTCACA
AAGTTTTGGCTGAGACACTCAAATCTCTTGAAGAAGACGGTTTCTTGTTACGAATTGATTTTCATGAAAATCCCCCACAC
GTCGAATACCAATTGACCGATCAAGGTCGAGAACTAGAGCCGGTTTTACTCGCCCTACAACAATGGGGTATGCGCTATAA
AACAGAGTCACTCACCTAA

Upstream 100 bases:

>100_bases
TGGTGTGCGGACACTCACAGCCGAACAATTAGAACTGAGCGCACGTCATCTTGTAGAACACGTCACCGAGGTTCATCTCA
TTCGAAAGTGAGGAGTATCT

Downstream 100 bases:

>100_bases
AAGTGCGTACTTGTCCTCCTTTGTATAGCTGATACGATTGAAGAAAGTCATCGTATTCACCTAACGAAGGAGGAATTTTT
TATGAAATCCGTATTATTGG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MATFLYQDRTFECPVQLSMNVIMGKWKVLVLWHVLRRPRRYGELKRLIQGISHKVLAETLKSLEEDGFLLRIDFHENPPH
VEYQLTDQGRELEPVLLALQQWGMRYKTESLT

Sequences:

>Translated_112_residues
MATFLYQDRTFECPVQLSMNVIMGKWKVLVLWHVLRRPRRYGELKRLIQGISHKVLAETLKSLEEDGFLLRIDFHENPPH
VEYQLTDQGRELEPVLLALQQWGMRYKTESLT
>Mature_111_residues
ATFLYQDRTFECPVQLSMNVIMGKWKVLVLWHVLRRPRRYGELKRLIQGISHKVLAETLKSLEEDGFLLRIDFHENPPHV
EYQLTDQGRELEPVLLALQQWGMRYKTESLT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=91, Percent_Identity=39.5604395604396, Blast_Score=76, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13325; Mature: 13194

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFLYQDRTFECPVQLSMNVIMGKWKVLVLWHVLRRPRRYGELKRLIQGISHKVLAETL
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KSLEEDGFLLRIDFHENPPHVEYQLTDQGRELEPVLLALQQWGMRYKTESLT
HHHHCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ATFLYQDRTFECPVQLSMNVIMGKWKVLVLWHVLRRPRRYGELKRLIQGISHKVLAETL
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KSLEEDGFLLRIDFHENPPHVEYQLTDQGRELEPVLLALQQWGMRYKTESLT
HHHHCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]