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The map label for this gene is ykoG [H]

Identifier: 229917048

GI number: 229917048

Start: 1296123

End: 1296800

Strand: Reverse

Name: ykoG [H]

Synonym: EAT1b_1322

Alternate gene names: 229917048

Gene position: 1296800-1296123 (Counterclockwise)

Preceding gene: 229917049

Following gene: 229917047

Centisome position: 43.23

GC content: 50.15

Gene sequence:

>678_bases
ATGCAGACGATTCTCGTCGTAGAAGATGATTCGAAGATTGCGCGATTACTGGAGTTGGAATTGAAGCACGCGGGGTATGC
GGTCATGGTGGCGACAGACGGTCGTACCGGTTTGGAACGAGCGCTCGCTGACGATGTCGACCTCGTGTTGCTTGACGTGA
TGTTGCCTCAAATGAGTGGACTCGAGGTCGTCCGTCGTCTGAAAGAAGAGCGACCTTTGTTACCCGTTCTGATGGTGACG
GCCCGTGGCGATCGATACGACAAAGTGAGTGGACTCGATCTTGGCGCAGATGATTACATCACGAAACCATTTGAAATAGA
AGAAGTGCTCGCACGGATTCGGGCATTTTTACGAATGCGCCAGCTTGTTCGTCAAGACCATTCCGAACAGGTGTTGACGT
ACGAGACATTGACTGTCGACGTGAATCGTCATGAAGTATATTGTGACGGAAAGAAAGTAGATTTGACTCGACGTGAGTTT
GACTTGTTGGTTTTCTTTTTAGAGAATCCGGAGCGTGTATTGACGCGTGACCAACTCGTCGAACACGTGTGGGGATTCGA
CTACTATGGGGATACGAACGTCGTGGACGTGTATGTCCGATACGTCAGGAAAAAACTGACCGGCTCTTGGATTCAAACGG
TTCGCGGTGTCGGCTATATGTTGAAGCGTGGTGAGTGA

Upstream 100 bases:

>100_bases
TTCCAGAAGGCGTTCGCCTGTTTTTTGCGGATTGAATTCGGGAATTGAATAACAATACGTCGAGCGAACCGCTCGGCGTT
TTTTCAAAGGAGTGAGCAGG

Downstream 100 bases:

>100_bases
CCGATGCTGCGAACAAAAATTGCATGGGCGATGACGGGGTTCATGTTATTGCTTCTTCTCGTCTCCTTTGGCGTGACCTG
GTTCGTCGCCAGGCAGGAAA

Product: two component transcriptional regulator, winged helix family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQTILVVEDDSKIARLLELELKHAGYAVMVATDGRTGLERALADDVDLVLLDVMLPQMSGLEVVRRLKEERPLLPVLMVT
ARGDRYDKVSGLDLGADDYITKPFEIEEVLARIRAFLRMRQLVRQDHSEQVLTYETLTVDVNRHEVYCDGKKVDLTRREF
DLLVFFLENPERVLTRDQLVEHVWGFDYYGDTNVVDVYVRYVRKKLTGSWIQTVRGVGYMLKRGE

Sequences:

>Translated_225_residues
MQTILVVEDDSKIARLLELELKHAGYAVMVATDGRTGLERALADDVDLVLLDVMLPQMSGLEVVRRLKEERPLLPVLMVT
ARGDRYDKVSGLDLGADDYITKPFEIEEVLARIRAFLRMRQLVRQDHSEQVLTYETLTVDVNRHEVYCDGKKVDLTRREF
DLLVFFLENPERVLTRDQLVEHVWGFDYYGDTNVVDVYVRYVRKKLTGSWIQTVRGVGYMLKRGE
>Mature_225_residues
MQTILVVEDDSKIARLLELELKHAGYAVMVATDGRTGLERALADDVDLVLLDVMLPQMSGLEVVRRLKEERPLLPVLMVT
ARGDRYDKVSGLDLGADDYITKPFEIEEVLARIRAFLRMRQLVRQDHSEQVLTYETLTVDVNRHEVYCDGKKVDLTRREF
DLLVFFLENPERVLTRDQLVEHVWGFDYYGDTNVVDVYVRYVRKKLTGSWIQTVRGVGYMLKRGE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=40.8071748878924, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=40.0900900900901, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=38.0090497737557, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=36.9369369369369, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=35.8744394618834, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=36.697247706422, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=37.280701754386, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=34.6491228070175, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=34.7826086956522, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=36.7256637168142, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=33.9285714285714, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=32.1428571428571, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=33.1896551724138, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=29.0598290598291, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=34.375, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1788550, Length=160, Percent_Identity=26.25, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=35.9649122807018, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994928, Length=139, Percent_Identity=34.5323741007194, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26080; Mature: 26080

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTILVVEDDSKIARLLELELKHAGYAVMVATDGRTGLERALADDVDLVLLDVMLPQMSG
CCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCH
LEVVRRLKEERPLLPVLMVTARGDRYDKVSGLDLGADDYITKPFEIEEVLARIRAFLRMR
HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QLVRQDHSEQVLTYETLTVDVNRHEVYCDGKKVDLTRREFDLLVFFLENPERVLTRDQLV
HHHHCCCCCCEEEEEEEEEEECCEEEEECCCEEECHHHEEEEEEEEECCCHHHHHHHHHH
EHVWGFDYYGDTNVVDVYVRYVRKKLTGSWIQTVRGVGYMLKRGE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTILVVEDDSKIARLLELELKHAGYAVMVATDGRTGLERALADDVDLVLLDVMLPQMSG
CCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCH
LEVVRRLKEERPLLPVLMVTARGDRYDKVSGLDLGADDYITKPFEIEEVLARIRAFLRMR
HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QLVRQDHSEQVLTYETLTVDVNRHEVYCDGKKVDLTRREFDLLVFFLENPERVLTRDQLV
HHHHCCCCCCEEEEEEEEEEECCEEEEECCCEEECHHHEEEEEEEEECCCHHHHHHHHHH
EHVWGFDYYGDTNVVDVYVRYVRKKLTGSWIQTVRGVGYMLKRGE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]