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The map label for this gene is ydaC [H]

Identifier: 229917009

GI number: 229917009

Start: 1260326

End: 1260955

Strand: Direct

Name: ydaC [H]

Synonym: EAT1b_1283

Alternate gene names: 229917009

Gene position: 1260326-1260955 (Clockwise)

Preceding gene: 229917001

Following gene: 229917020

Centisome position: 42.01

GC content: 49.21

Gene sequence:

>630_bases
ATGCTCCCACAAGTGTTCAAAAACTGGGTGGACAGTCAGTATGAAAATCCACGCGGCTCCGTTGGGAAATATATCGGGGA
AAAGATGGTACGCCAACACCGGATCGAAGTCGAATGGACGATTGAACAGTTAGACATTCAACCCGGTACAACCGTTCTAG
AGCTCGGGTGCGGGGCCGGCGATGCGATGGCGACCATCCTTCAACGACATCCTGACGTACATGTCATGGGTCTCGACCGT
TCGAAGACGATTCTCGATTCAGCACGACAGCGTAATCATGATTCGATGCAAACAAAACGGGCAAAGTTGATTCAAGGAGA
TTTGCATCAATTTGAGATGATGGACGCATCCGTCAATCACGTGTTCAGCGTTCACACACTATATTTCTGGAGAGATGTCA
CGACCGTTCTGTCTGAAATCGAACGCGTCTTGAAACCGAATGGCACATTTGTCATCACCTACTGTGACGGGAAAGGTGAT
GTCGAATGGAACGACATCTCCGATATGATTCGGAATCAATTTATCCCCGCAGCGGTGAACCTCGGATTCAAGGACGTATC
GGTACAACGTGGACCGGACTCCCGTGATTATCATACGGTCGCCGTTATGGGATGCAAACCGAACTCTTAA

Upstream 100 bases:

>100_bases
CGAGAGTTGGTTGCCGAGTATCCAAAATGAACGCATGTTGTTGACTCCTTTGTCTCATCAATATGCTACAATCGAGCTAC
TTTCAAAGTGAGGTGACAGT

Downstream 100 bases:

>100_bases
TCACTACCCGTTTTTCATTCGATCCTTTCACGCCAATCGGTTCGTTGGTGCTGAATGCGAAAACAGAAGGCTAAACCAAT
CGTAATCCATCGGTTTAGCC

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLPQVFKNWVDSQYENPRGSVGKYIGEKMVRQHRIEVEWTIEQLDIQPGTTVLELGCGAGDAMATILQRHPDVHVMGLDR
SKTILDSARQRNHDSMQTKRAKLIQGDLHQFEMMDASVNHVFSVHTLYFWRDVTTVLSEIERVLKPNGTFVITYCDGKGD
VEWNDISDMIRNQFIPAAVNLGFKDVSVQRGPDSRDYHTVAVMGCKPNS

Sequences:

>Translated_209_residues
MLPQVFKNWVDSQYENPRGSVGKYIGEKMVRQHRIEVEWTIEQLDIQPGTTVLELGCGAGDAMATILQRHPDVHVMGLDR
SKTILDSARQRNHDSMQTKRAKLIQGDLHQFEMMDASVNHVFSVHTLYFWRDVTTVLSEIERVLKPNGTFVITYCDGKGD
VEWNDISDMIRNQFIPAAVNLGFKDVSVQRGPDSRDYHTVAVMGCKPNS
>Mature_209_residues
MLPQVFKNWVDSQYENPRGSVGKYIGEKMVRQHRIEVEWTIEQLDIQPGTTVLELGCGAGDAMATILQRHPDVHVMGLDR
SKTILDSARQRNHDSMQTKRAKLIQGDLHQFEMMDASVNHVFSVHTLYFWRDVTTVLSEIERVLKPNGTFVITYCDGKGD
VEWNDISDMIRNQFIPAAVNLGFKDVSVQRGPDSRDYHTVAVMGCKPNS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 23762; Mature: 23762

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQVFKNWVDSQYENPRGSVGKYIGEKMVRQHRIEVEWTIEQLDIQPGTTVLELGCGAG
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCC
DAMATILQRHPDVHVMGLDRSKTILDSARQRNHDSMQTKRAKLIQGDLHQFEMMDASVNH
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSVHTLYFWRDVTTVLSEIERVLKPNGTFVITYCDGKGDVEWNDISDMIRNQFIPAAVN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHC
LGFKDVSVQRGPDSRDYHTVAVMGCKPNS
CCCEEEEEECCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLPQVFKNWVDSQYENPRGSVGKYIGEKMVRQHRIEVEWTIEQLDIQPGTTVLELGCGAG
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCC
DAMATILQRHPDVHVMGLDRSKTILDSARQRNHDSMQTKRAKLIQGDLHQFEMMDASVNH
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSVHTLYFWRDVTTVLSEIERVLKPNGTFVITYCDGKGDVEWNDISDMIRNQFIPAAVN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHC
LGFKDVSVQRGPDSRDYHTVAVMGCKPNS
CCCEEEEEECCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]