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The map label for this gene is yheN [H]

Identifier: 229916970

GI number: 229916970

Start: 1219072

End: 1219797

Strand: Direct

Name: yheN [H]

Synonym: EAT1b_1244

Alternate gene names: 229916970

Gene position: 1219072-1219797 (Clockwise)

Preceding gene: 229916969

Following gene: 229916971

Centisome position: 40.64

GC content: 39.39

Gene sequence:

>726_bases
GTGTTTAAAAAAGTTATCGCCTGTCTTCTAGTTATTTTCATGTTATGTAGTTCGTCTGTTTCAATTTCAGCAAAAGAATT
TCATTCTCGATATAATAAAGGAGAAATGGTCTATCTAACCTTCGACGATGGACCAAATCAATACACACCGAAGTTGCTCG
ATGTCTTAAAACGATATGATGTGAAGGCAACCTTTTTCATTTTAGGCAAGAAAATTAAAGGAAATGAAGCCATTCTCCAA
CGAATTGTGGACGAGGGACATACGATTGGACTACATAGTATGACTCACGATAAGAAAACATTTTATCGTTCCCCTCAAAC
CGCAGTAAATGAGATGAAACAAGTTCAACAATTGATTTTTGATATCACCGGCGTAAAGTCAACGACCATTCGCGTCCCTT
ATGGAAGTGTGCCTCATATGACTAAAGCACATCGTCAAGCGATGGAAAAGGCCGGTTTTGACATGTGGGACTGGAACGTT
GATACGCTCGATTGGAAATACAAAAAGAATCAAAAAGCGATGCGCTATCAAACGATCAAACAAGTACGTGCTCACCGCGC
TTACTATCAAGCATCTATCGTCTTGATGCATGATCACGCCACTTCTCCAGAATCACTCTCTTATATGCTGAGACATTTGA
CACGTGAGAAGTTCCTCTTTTTGACGACGGATCAAGCAAAAGAACCATATCATTTCTATAACAAATGGTATGGCACATCA
CATTGA

Upstream 100 bases:

>100_bases
CTCCTATCTCACTAAAAGGCATTTGAACACGCAATCCCTTTTCTTGTAAATTATATGTGGGAATAATATCCACATATACT
ATTTAAAGGGGAATCACCAC

Downstream 100 bases:

>100_bases
TTACCTCAATCGGAGCCCTGTGCTCCTTTTTTTGTTCCAAATGTGCAATCTATATTAACTTCCGTCAACTTCATCCGATA
TGTATAGAGCTACAACAAAT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MFKKVIACLLVIFMLCSSSVSISAKEFHSRYNKGEMVYLTFDDGPNQYTPKLLDVLKRYDVKATFFILGKKIKGNEAILQ
RIVDEGHTIGLHSMTHDKKTFYRSPQTAVNEMKQVQQLIFDITGVKSTTIRVPYGSVPHMTKAHRQAMEKAGFDMWDWNV
DTLDWKYKKNQKAMRYQTIKQVRAHRAYYQASIVLMHDHATSPESLSYMLRHLTREKFLFLTTDQAKEPYHFYNKWYGTS
H

Sequences:

>Translated_241_residues
MFKKVIACLLVIFMLCSSSVSISAKEFHSRYNKGEMVYLTFDDGPNQYTPKLLDVLKRYDVKATFFILGKKIKGNEAILQ
RIVDEGHTIGLHSMTHDKKTFYRSPQTAVNEMKQVQQLIFDITGVKSTTIRVPYGSVPHMTKAHRQAMEKAGFDMWDWNV
DTLDWKYKKNQKAMRYQTIKQVRAHRAYYQASIVLMHDHATSPESLSYMLRHLTREKFLFLTTDQAKEPYHFYNKWYGTS
H
>Mature_241_residues
MFKKVIACLLVIFMLCSSSVSISAKEFHSRYNKGEMVYLTFDDGPNQYTPKLLDVLKRYDVKATFFILGKKIKGNEAILQ
RIVDEGHTIGLHSMTHDKKTFYRSPQTAVNEMKQVQQLIFDITGVKSTTIRVPYGSVPHMTKAHRQAMEKAGFDMWDWNV
DTLDWKYKKNQKAMRYQTIKQVRAHRAYYQASIVLMHDHATSPESLSYMLRHLTREKFLFLTTDQAKEPYHFYNKWYGTS
H

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=177, Percent_Identity=29.9435028248588, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28264; Mature: 28264

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKVIACLLVIFMLCSSSVSISAKEFHSRYNKGEMVYLTFDDGPNQYTPKLLDVLKRYD
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCC
VKATFFILGKKIKGNEAILQRIVDEGHTIGLHSMTHDKKTFYRSPQTAVNEMKQVQQLIF
CCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHH
DITGVKSTTIRVPYGSVPHMTKAHRQAMEKAGFDMWDWNVDTLDWKYKKNQKAMRYQTIK
HHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCEEECCCCHHHHHHHHH
QVRAHRAYYQASIVLMHDHATSPESLSYMLRHLTREKFLFLTTDQAKEPYHFYNKWYGTS
HHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCCCC
H
C
>Mature Secondary Structure
MFKKVIACLLVIFMLCSSSVSISAKEFHSRYNKGEMVYLTFDDGPNQYTPKLLDVLKRYD
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCC
VKATFFILGKKIKGNEAILQRIVDEGHTIGLHSMTHDKKTFYRSPQTAVNEMKQVQQLIF
CCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHH
DITGVKSTTIRVPYGSVPHMTKAHRQAMEKAGFDMWDWNVDTLDWKYKKNQKAMRYQTIK
HHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCEEECCCCHHHHHHHHH
QVRAHRAYYQASIVLMHDHATSPESLSYMLRHLTREKFLFLTTDQAKEPYHFYNKWYGTS
HHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]