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The map label for this gene is ytxB [H]

Identifier: 229916969

GI number: 229916969

Start: 1218320

End: 1218961

Strand: Direct

Name: ytxB [H]

Synonym: EAT1b_1243

Alternate gene names: 229916969

Gene position: 1218320-1218961 (Clockwise)

Preceding gene: 229916967

Following gene: 229916970

Centisome position: 40.61

GC content: 52.96

Gene sequence:

>642_bases
TTGCCACGACCACTCAAACTCACACTCTTTCTTCTAGTGTTTGGATCTTTGTTCTATATCACCCATTTCCACTATGAATT
GCGTCCGTCTGACATCCGGGACATCGTCTTGTCATTCGGATTTTGGGGGCCACTCTTCTTTATTTTCCTTTATGCCATCG
GTCCGGTCGCATTTTTACCAACATCCGTGCTGTCACTCGGAGCCGGACTCGCATTCGGCGTGTGGCCAGGTGTCCTCTAT
ATCATCATCGGCGCGACTGCTGCCGCGACGACCGGGTACGTGATGGGGCGCTTTTTCGGTCGATCGGTCATCAATGTCGA
CCGCTATCCATGGTCAGAGAAACTGTTCACACAAATGGAACGTCGTGGCTTTTTATATGTATTTGTCCTCCGGCTCATCC
CGCTCGTCAGTTTCGACTTACTCAGTTATGCCGGCGGAATCTCACGTGTTCGCTTCCGTGCCTTCGTACCGGCGACCGTG
CTCGGCATGATTCCAGGTACGTTCGCCTACAGCTTCCTCGGGGCGAGCCTCGCCTCAGGCAGTGTCACTACGATCTTCAT
CGCCGCGCTCGTCTTCGTCGGCTTGATTGTCGTGACGTATATCTTCCGGGAACCGGTGAAAAAGTGGTTAGGCCTAAATT
GA

Upstream 100 bases:

>100_bases
TTATCTCGTTACACCTTTTGTAAGCCGGCTCGCATTTGTATTGCGTTGAGATGCAGTATACTAACATCAGATAATTACGG
TTACGAAAGGAGCGGACAAC

Downstream 100 bases:

>100_bases
AAAATCGATTCTCCTATCTCACTAAAAGGCATTTGAACACGCAATCCCTTTTCTTGTAAATTATATGTGGGAATAATATC
CACATATACTATTTAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPRPLKLTLFLLVFGSLFYITHFHYELRPSDIRDIVLSFGFWGPLFFIFLYAIGPVAFLPTSVLSLGAGLAFGVWPGVLY
IIIGATAAATTGYVMGRFFGRSVINVDRYPWSEKLFTQMERRGFLYVFVLRLIPLVSFDLLSYAGGISRVRFRAFVPATV
LGMIPGTFAYSFLGASLASGSVTTIFIAALVFVGLIVVTYIFREPVKKWLGLN

Sequences:

>Translated_213_residues
MPRPLKLTLFLLVFGSLFYITHFHYELRPSDIRDIVLSFGFWGPLFFIFLYAIGPVAFLPTSVLSLGAGLAFGVWPGVLY
IIIGATAAATTGYVMGRFFGRSVINVDRYPWSEKLFTQMERRGFLYVFVLRLIPLVSFDLLSYAGGISRVRFRAFVPATV
LGMIPGTFAYSFLGASLASGSVTTIFIAALVFVGLIVVTYIFREPVKKWLGLN
>Mature_212_residues
PRPLKLTLFLLVFGSLFYITHFHYELRPSDIRDIVLSFGFWGPLFFIFLYAIGPVAFLPTSVLSLGAGLAFGVWPGVLYI
IIGATAAATTGYVMGRFFGRSVINVDRYPWSEKLFTQMERRGFLYVFVLRLIPLVSFDLLSYAGGISRVRFRAFVPATVL
GMIPGTFAYSFLGASLASGSVTTIFIAALVFVGLIVVTYIFREPVKKWLGLN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=169, Percent_Identity=28.4023668639053, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788049, Length=157, Percent_Identity=31.2101910828025, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23710; Mature: 23578

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPLKLTLFLLVFGSLFYITHFHYELRPSDIRDIVLSFGFWGPLFFIFLYAIGPVAFLP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLSLGAGLAFGVWPGVLYIIIGATAAATTGYVMGRFFGRSVINVDRYPWSEKLFTQME
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHH
RRGFLYVFVLRLIPLVSFDLLSYAGGISRVRFRAFVPATVLGMIPGTFAYSFLGASLASG
HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SVTTIFIAALVFVGLIVVTYIFREPVKKWLGLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRPLKLTLFLLVFGSLFYITHFHYELRPSDIRDIVLSFGFWGPLFFIFLYAIGPVAFLP
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLSLGAGLAFGVWPGVLYIIIGATAAATTGYVMGRFFGRSVINVDRYPWSEKLFTQME
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHH
RRGFLYVFVLRLIPLVSFDLLSYAGGISRVRFRAFVPATVLGMIPGTFAYSFLGASLASG
HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SVTTIFIAALVFVGLIVVTYIFREPVKKWLGLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]