| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916955
Identifier: 229916955
GI number: 229916955
Start: 1206573
End: 1207463
Strand: Direct
Name: 229916955
Synonym: EAT1b_1229
Alternate gene names: NA
Gene position: 1206573-1207463 (Clockwise)
Preceding gene: 229916952
Following gene: 229916956
Centisome position: 40.22
GC content: 50.51
Gene sequence:
>891_bases ATGAAAAAACGACACTTGCAACTGATTCGGCTACTCAATCGCGGACGACGTTTCACGGCGGAAGAACTGGCCCAAGAGAC AGGCGCCTCCATTCGGACGATTCAACGGGATATGCTCTCGCTCGAAGAACTCGGTTATCCGATTTGGAGTGTTCCTGGAA CTGGGGGCGGCTATGAAATGTTGCCGAACCGCTTATTGCCACCGCTCCACCTACGCGAACAAGAAGCCGTCGCCCTTTAT CTCACACTCAAATGGATGGAACACATTCCTGATGTGCCGTTCGGGGACATACGAAGTACGTTGTCTGATTGGTACGTGAA CGAGTTACCACATGACGTAGAGACGAAAATTCGGCGATTGGAGCGAAACATTCTCTGGCTCGGAAACAAACAAATTCCAA AAGCGCCGTTCACAAAAGACATTTACCAGGCAATTGAGCGCAAAAACAAGATAGAGATGACGTATCGATCGACGAACGGA TCACGTACGTTCCCCATCGCACCGGTCGGTATGGCACTCCTTGACTTAAAGTGGTATGTCTTCGGGCTCTCCGAACTCGG ATTCCGTCAATATCGGATTGATCGCATCGAAGCGGTCCAAGTGCTCGAGGAATCGTTCGAGTCCGAGGATTTGGTGACCT TGCTCAAAGAGAGTGACGAACGAATCGGTGTGACCGTTCATCTCGAACTCACCCCACTCGGTCGTCGTCTGCTTGAAGAT GTATTACCCGATATCGATGAGTTGAATGAGTGGGATGTACCTGAAGAAGAGCTACCGTTTTTATCGAGGCAGCTGTTGAG GGCTGGAGCGGAAGTAGAGGTGAAAGCGCCGGAGCAGTTGCGGGAGATGATGAAGGAGCATGCGGAACAATTGATACAAC GGTATATGTAA
Upstream 100 bases:
>100_bases CAATATATAACACAACATTCGGCATCATGTGTTCCTCCTTGATTCGTGATACATTCAGCTTAACGAACAAACACGACAAA AGATGACGGGAATGGTAGAT
Downstream 100 bases:
>100_bases GTTTCCGAGTAAGTGCCACGAAACATTTATGAATTTTCATCCGTATAAACTACCAACACTCAACAAAGGCGGTATGTGTA TGCATCACGAGTACAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator; DeoR-Family Protein Transcriptional Regulator; DNA-Bind Protein; Transcriptional Regulator DeoR Family; Deor Family Transcritional Regulator
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM
Sequences:
>Translated_296_residues MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM >Mature_296_residues MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEMLPNRLLPPLHLREQEAVALY LTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRLERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNG SRTFPIAPVGMALLDLKWYVFGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34601; Mature: 34601
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS51000 HTH_DEOR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEM CCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH LPNRLLPPLHLREQEAVALYLTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRL HHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH ERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNGSRTFPIAPVGMALLDLKWYV HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHH FGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED HHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM HCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKRHLQLIRLLNRGRRFTAEELAQETGASIRTIQRDMLSLEELGYPIWSVPGTGGGYEM CCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH LPNRLLPPLHLREQEAVALYLTLKWMEHIPDVPFGDIRSTLSDWYVNELPHDVETKIRRL HHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH ERNILWLGNKQIPKAPFTKDIYQAIERKNKIEMTYRSTNGSRTFPIAPVGMALLDLKWYV HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHH FGLSELGFRQYRIDRIEAVQVLEESFESEDLVTLLKESDERIGVTVHLELTPLGRRLLED HHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH VLPDIDELNEWDVPEEELPFLSRQLLRAGAEVEVKAPEQLREMMKEHAEQLIQRYM HCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA