| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916956
Identifier: 229916956
GI number: 229916956
Start: 1207543
End: 1208487
Strand: Direct
Name: 229916956
Synonym: EAT1b_1230
Alternate gene names: NA
Gene position: 1207543-1208487 (Clockwise)
Preceding gene: 229916955
Following gene: 229916963
Centisome position: 40.25
GC content: 43.81
Gene sequence:
>945_bases ATGCATCACGAGTACAAACAGTTCATCCACTTATTCAAAGACGGTCAGTTCGATGACATTTATCATCAAATGACCGATTC ATGCAAATCTCATTATTCCATGGACACGTTTCATCACGAAGCGTCTTCGTTTCATCATGGAATTCGGCGCTATCGTCTAA TCAATGAGATGGTGTTGAATGGGAATCGATATGTACTATGGTCGGATTTCCGAAAAGAAAAATTATTGTCCGTTCAATTC AATCGCGTGAATCAGATTGAATCCATCCAAATGACTGTCTCATCCTCTTCCAAAGAGACTAATCTTTCTACGAAAAACAA GTACCATCTCCCATTCAAAGAACAATGGTTCGTCGTCTCAGAAGGGGCGAACGTCGGAATGTATCTTCATGAACCGATTC GAAAGAAACGTGATGGCTATGACTTTCTAAAAACAAAGGATCTGCAACCTTACAGTCGTAGAAAAATAGGAATCGATGGC TCGTATGCGTTCGGAGAACAAGTCCTGTCCCCACTAGATGGTACGGTTTATCAGGTAGTCGATGGGTTAACGGATGAACC GAATACTGATCATCCATTCGGCAATCACGTCATCATTCAACATTCAAACGATGAATATAGCCTTCTCGCCCATCTCGAAA ATGATTCGATTGGCGTAAATGTAGGCGATACGGTCAAAACGAAACAGTTGATTGGACGCTGTGGACGTTCCGGAAATACG CCTGAGCCACGCTTGCATATGCGTGTCATGAATCACCCAGATGTGGACAGCGCGACCGCCCTCCCGATTCGATGGAAAGG TCGATTGCGACCTGTGCGTGGAAAAGTAGTCACCTCTCGTGAGGAAGAGGGATGGTCGTATGGAATTGCAGCCCTCGATT TTTCAGAACTGCTTCTTTACATTGTTCAAGCCATTCCGCGATTATTTTTTCGCTTTTTTGGATAA
Upstream 100 bases:
>100_bases TTGATACAACGGTATATGTAAGTTTCCGAGTAAGTGCCACGAAACATTTATGAATTTTCATCCGTATAAACTACCAACAC TCAACAAAGGCGGTATGTGT
Downstream 100 bases:
>100_bases GAAAACCCCTCAGAAATCTGAGGGGCCCAACATCACATATCCAAATCGGTGAACGCAAGTGGGACGAGCTCCCCAAGCGT CACTTCTTTCACATCGGCGT
Product: peptidase M23
Products: NA
Alternate protein names: Secreted Peptidase; Peptidase; Urea Transporter; Endopeptidase; M23/M37 Peptidase Domain-Containing Protein; M23 Peptidase Domain Protein; Peptidase Family; M23 Peptidase Domain-Containing Protein; Peptidase Family M; M23/M37 Peptidase Domain Protein
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MHHEYKQFIHLFKDGQFDDIYHQMTDSCKSHYSMDTFHHEASSFHHGIRRYRLINEMVLNGNRYVLWSDFRKEKLLSVQF NRVNQIESIQMTVSSSSKETNLSTKNKYHLPFKEQWFVVSEGANVGMYLHEPIRKKRDGYDFLKTKDLQPYSRRKIGIDG SYAFGEQVLSPLDGTVYQVVDGLTDEPNTDHPFGNHVIIQHSNDEYSLLAHLENDSIGVNVGDTVKTKQLIGRCGRSGNT PEPRLHMRVMNHPDVDSATALPIRWKGRLRPVRGKVVTSREEEGWSYGIAALDFSELLLYIVQAIPRLFFRFFG
Sequences:
>Translated_314_residues MHHEYKQFIHLFKDGQFDDIYHQMTDSCKSHYSMDTFHHEASSFHHGIRRYRLINEMVLNGNRYVLWSDFRKEKLLSVQF NRVNQIESIQMTVSSSSKETNLSTKNKYHLPFKEQWFVVSEGANVGMYLHEPIRKKRDGYDFLKTKDLQPYSRRKIGIDG SYAFGEQVLSPLDGTVYQVVDGLTDEPNTDHPFGNHVIIQHSNDEYSLLAHLENDSIGVNVGDTVKTKQLIGRCGRSGNT PEPRLHMRVMNHPDVDSATALPIRWKGRLRPVRGKVVTSREEEGWSYGIAALDFSELLLYIVQAIPRLFFRFFG >Mature_314_residues MHHEYKQFIHLFKDGQFDDIYHQMTDSCKSHYSMDTFHHEASSFHHGIRRYRLINEMVLNGNRYVLWSDFRKEKLLSVQF NRVNQIESIQMTVSSSSKETNLSTKNKYHLPFKEQWFVVSEGANVGMYLHEPIRKKRDGYDFLKTKDLQPYSRRKIGIDG SYAFGEQVLSPLDGTVYQVVDGLTDEPNTDHPFGNHVIIQHSNDEYSLLAHLENDSIGVNVGDTVKTKQLIGRCGRSGNT PEPRLHMRVMNHPDVDSATALPIRWKGRLRPVRGKVVTSREEEGWSYGIAALDFSELLLYIVQAIPRLFFRFFG
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36427; Mature: 36427
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHEYKQFIHLFKDGQFDDIYHQMTDSCKSHYSMDTFHHEASSFHHGIRRYRLINEMVLN CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GNRYVLWSDFRKEKLLSVQFNRVNQIESIQMTVSSSSKETNLSTKNKYHLPFKEQWFVVS CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEE EGANVGMYLHEPIRKKRDGYDFLKTKDLQPYSRRKIGIDGSYAFGEQVLSPLDGTVYQVV CCCCCCEEEHHHHHHCCCCCCHHHCCCCCCHHHCEECCCCCHHHHHHHHCCCCCHHHHHH DGLTDEPNTDHPFGNHVIIQHSNDEYSLLAHLENDSIGVNVGDTVKTKQLIGRCGRSGNT CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCC PEPRLHMRVMNHPDVDSATALPIRWKGRLRPVRGKVVTSREEEGWSYGIAALDFSELLLY CCCEEEEEECCCCCCCCCEECEEEECCCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHH IVQAIPRLFFRFFG HHHHHHHHHHHHCC >Mature Secondary Structure MHHEYKQFIHLFKDGQFDDIYHQMTDSCKSHYSMDTFHHEASSFHHGIRRYRLINEMVLN CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GNRYVLWSDFRKEKLLSVQFNRVNQIESIQMTVSSSSKETNLSTKNKYHLPFKEQWFVVS CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEE EGANVGMYLHEPIRKKRDGYDFLKTKDLQPYSRRKIGIDGSYAFGEQVLSPLDGTVYQVV CCCCCCEEEHHHHHHCCCCCCHHHCCCCCCHHHCEECCCCCHHHHHHHHCCCCCHHHHHH DGLTDEPNTDHPFGNHVIIQHSNDEYSLLAHLENDSIGVNVGDTVKTKQLIGRCGRSGNT CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCC PEPRLHMRVMNHPDVDSATALPIRWKGRLRPVRGKVVTSREEEGWSYGIAALDFSELLLY CCCEEEEEECCCCCCCCCEECEEEECCCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHH IVQAIPRLFFRFFG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA