| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mdtH [H]
Identifier: 229916946
GI number: 229916946
Start: 1197694
End: 1198899
Strand: Direct
Name: mdtH [H]
Synonym: EAT1b_1220
Alternate gene names: 229916946
Gene position: 1197694-1198899 (Clockwise)
Preceding gene: 229916945
Following gene: 229916947
Centisome position: 39.92
GC content: 51.24
Gene sequence:
>1206_bases ATGGAATTATACCGTTGGGACCTCAATCTGAAAGTCCGCTTATTCGGCGAAGGCTTATTCAACCTCTTGTTTTGGATGTA CTTTCCATTCATCACCGTCTATTTCGCCCGGACGCTCGGTGTCGAGCTAGCCGGACTACTCATGGCCGTGCCACCGTTGT TCCTGCTAGTCGGCAGCTTGATTGGCGGTTCGCTTGCAGATGAGATTGGTCGCCGCCCCGTCATGCTCGCCGGGACGTTC TCACAAGGTTTCCTATTCCTCGTTTTCGCTTTATCAACGAACGCCTATGTCGATTACATCACCTACATCAGCATCGGTTT TATGGGTGCCATCTACAAACCGGCCAGCTCGGCGATGGTCGCCGACCTCGTTCCGACTGAACATTTACGGAATGTATTCG CGACGTTTATGGCTTCGAACAATATCGGTGCTGTTCTCGGTCCGCTTCTTGGTGCGGTCCTCTTTTTCGAGTATCGTCAG GCGCTCCTCCTCGGCTGCGCCCTTGTTCTTTTTTGTTACGGGGGTTTGCTCGCGGTTCTAACCAGTGAGACACGACCGGT CTCGACCGAGAAGACGGTCGCAACGACATTTTTCACCCAAGGGCGGTCGTATGCGACGATTTTGATTGACCCGCTTTTCC GCCTCTATCTGATTGCTGGCGTATTCGCCTTAATCCCAATCATGCAGCTAGACGTGTATTTACCTGTCTATTTGATTGAA CAAACTCCGGCCACGTTCAACGTCTCGAATACAGTCTTATTCGGCTGGCTCGTTGCATATAACGGCCTCTTGTTCGTCGT CTTCATCATTCCTGTCACACGTGTGTTTCGGGCGTGGGACGAACGGCGTGTTTTACTATTGTCGACTTTCCTAGGAGGTT TCGGGACGTTTCTCGTCGCCTTTTCATCAAATATCTGGTACTTGCTCATCGTCACGACCATGTTCACGTTCGGGGAGCTG ATTCGTTCTCCCGTCAGTCAGAGTTTCGTTAGTCACTATGCACCAATCGAGTCACGTGGACAATACCTCGCGACCGATAC GCTCCAAAACACAATCGGCAAGTTCCTCGCACCAGTGACGGTATTTGCATCAGGATTTCTCTCCCCGCTCGCTGTGTTCA CACTCATCTTGCTGTCGGCACTCATCGGTATGGGGCTGTATGCGAAGCTATTTGACAGGCTGAACCAAATGAAAGTTTCG TCTTAA
Upstream 100 bases:
>100_bases GCTATTTCTATTTTTAGTCTAGCAAATCCCGCAACATAAGTCTATTCTTTCTCTCCACGACCTCTTACATTAAAGAGAGA CTCTTGAAAGGAGCATATCT
Downstream 100 bases:
>100_bases GGTTACCGCAATCACTTTGTTACTAATCAACGCCTGTATCGCATTTCGGGAATTTTATTTAATCTCAAAGATTGATCGTT CGTTCTTGTATCTATATAAG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MELYRWDLNLKVRLFGEGLFNLLFWMYFPFITVYFARTLGVELAGLLMAVPPLFLLVGSLIGGSLADEIGRRPVMLAGTF SQGFLFLVFALSTNAYVDYITYISIGFMGAIYKPASSAMVADLVPTEHLRNVFATFMASNNIGAVLGPLLGAVLFFEYRQ ALLLGCALVLFCYGGLLAVLTSETRPVSTEKTVATTFFTQGRSYATILIDPLFRLYLIAGVFALIPIMQLDVYLPVYLIE QTPATFNVSNTVLFGWLVAYNGLLFVVFIIPVTRVFRAWDERRVLLLSTFLGGFGTFLVAFSSNIWYLLIVTTMFTFGEL IRSPVSQSFVSHYAPIESRGQYLATDTLQNTIGKFLAPVTVFASGFLSPLAVFTLILLSALIGMGLYAKLFDRLNQMKVS S
Sequences:
>Translated_401_residues MELYRWDLNLKVRLFGEGLFNLLFWMYFPFITVYFARTLGVELAGLLMAVPPLFLLVGSLIGGSLADEIGRRPVMLAGTF SQGFLFLVFALSTNAYVDYITYISIGFMGAIYKPASSAMVADLVPTEHLRNVFATFMASNNIGAVLGPLLGAVLFFEYRQ ALLLGCALVLFCYGGLLAVLTSETRPVSTEKTVATTFFTQGRSYATILIDPLFRLYLIAGVFALIPIMQLDVYLPVYLIE QTPATFNVSNTVLFGWLVAYNGLLFVVFIIPVTRVFRAWDERRVLLLSTFLGGFGTFLVAFSSNIWYLLIVTTMFTFGEL IRSPVSQSFVSHYAPIESRGQYLATDTLQNTIGKFLAPVTVFASGFLSPLAVFTLILLSALIGMGLYAKLFDRLNQMKVS S >Mature_401_residues MELYRWDLNLKVRLFGEGLFNLLFWMYFPFITVYFARTLGVELAGLLMAVPPLFLLVGSLIGGSLADEIGRRPVMLAGTF SQGFLFLVFALSTNAYVDYITYISIGFMGAIYKPASSAMVADLVPTEHLRNVFATFMASNNIGAVLGPLLGAVLFFEYRQ ALLLGCALVLFCYGGLLAVLTSETRPVSTEKTVATTFFTQGRSYATILIDPLFRLYLIAGVFALIPIMQLDVYLPVYLIE QTPATFNVSNTVLFGWLVAYNGLLFVVFIIPVTRVFRAWDERRVLLLSTFLGGFGTFLVAFSSNIWYLLIVTTMFTFGEL IRSPVSQSFVSHYAPIESRGQYLATDTLQNTIGKFLAPVTVFASGFLSPLAVFTLILLSALIGMGLYAKLFDRLNQMKVS S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtH (TC 2.A.1.2.21) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=335, Percent_Identity=22.089552238806, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR022855 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44449; Mature: 44449
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELYRWDLNLKVRLFGEGLFNLLFWMYFPFITVYFARTLGVELAGLLMAVPPLFLLVGSL CCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGSLADEIGRRPVMLAGTFSQGFLFLVFALSTNAYVDYITYISIGFMGAIYKPASSAMV HCCHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHH ADLVPTEHLRNVFATFMASNNIGAVLGPLLGAVLFFEYRQALLLGCALVLFCYGGLLAVL HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSETRPVSTEKTVATTFFTQGRSYATILIDPLFRLYLIAGVFALIPIMQLDVYLPVYLIE HCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE QTPATFNVSNTVLFGWLVAYNGLLFVVFIIPVTRVFRAWDERRVLLLSTFLGGFGTFLVA CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FSSNIWYLLIVTTMFTFGELIRSPVSQSFVSHYAPIESRGQYLATDTLQNTIGKFLAPVT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEHHHHHHHHHHHHHHHHH VFASGFLSPLAVFTLILLSALIGMGLYAKLFDRLNQMKVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELYRWDLNLKVRLFGEGLFNLLFWMYFPFITVYFARTLGVELAGLLMAVPPLFLLVGSL CCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGSLADEIGRRPVMLAGTFSQGFLFLVFALSTNAYVDYITYISIGFMGAIYKPASSAMV HCCHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHH ADLVPTEHLRNVFATFMASNNIGAVLGPLLGAVLFFEYRQALLLGCALVLFCYGGLLAVL HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSETRPVSTEKTVATTFFTQGRSYATILIDPLFRLYLIAGVFALIPIMQLDVYLPVYLIE HCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE QTPATFNVSNTVLFGWLVAYNGLLFVVFIIPVTRVFRAWDERRVLLLSTFLGGFGTFLVA CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH FSSNIWYLLIVTTMFTFGELIRSPVSQSFVSHYAPIESRGQYLATDTLQNTIGKFLAPVT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEHHHHHHHHHHHHHHHHH VFASGFLSPLAVFTLILLSALIGMGLYAKLFDRLNQMKVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA