| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916938
Identifier: 229916938
GI number: 229916938
Start: 1186595
End: 1188436
Strand: Reverse
Name: 229916938
Synonym: EAT1b_1212
Alternate gene names: NA
Gene position: 1188436-1186595 (Counterclockwise)
Preceding gene: 229916939
Following gene: 229916937
Centisome position: 39.62
GC content: 49.02
Gene sequence:
>1842_bases ATGAATAAATCGATTACGACGTATATCGCGTCTCTGTTCTCCTTACTCATCGCGATGATTGTCGTCGTCCAGTTTTTACG GCTTGACTACGGTCATCGGCTCATCCCAAAAGAAGCGCATGAGCCGAAATCCTTTACGACACTCGCGGGTGAGGTGAGAG CGGTGGAGGGAGAACCGGTTCAAATCTACATCCATCAGAACGACGACGATTTGTCGACAGCTGTTTTGAATAACTTTAAA TACGCGCTCGACTATGCAAAATTGCCTTATACCTCAATCGAGGCAGAGGCCATCGCATCGATTGAGCCTTCTCCACGACA CGTTCTCGTCGTCAGCGGGGAAAATACGAAATCATGGCCGTACGAGGCAATTCGGTCCTTCGTTGAAAAAGGTGGACGGC TCTACGTTGCCGGACGATTCATCGATCAAGACTGGGCAGACCTGGTCGGCGTAAGCGATTTTGGGGACTTTAAAGATGGA GTCAACGGGTTAATTTTCGAACAAGAAATTTTCCCTGGATATGTCGACTTGCCTCAAGACTCAGGGTTATTCGTCCACAG CATTGCTGACGTCAAACTGAAAGAAGAGGCGGACGTCCTCATTTCTGCCAAAAACGAACCAATATTATGGCAGTCTCCTT ATGGGAAGGGCGAAGTGATGTTTTGGAATACGACGTCGTTGACGGATAAGAACTCACGCGGCTTGATGGTGCAGACGCTT TCGATGCTGTTCCCAGCGTTCGTCATGCCACAAGCTGGCATCAAGGTCGTTCACCTTGACGACTTCCCGGCACCGGTACC AAATTATTTGAATCCGGTCATCACGAAAGAATATGATTTGTCCATCAAAGAGTTCTTCTCAGAGATTTGGTGGAAAGACA TGAAGCAAATCGGTGCTGACTACGACGTCACTTATTCTGGTTTCCTGATCGGCAGTTATAAAGCGACGAATGAAGAGACG ACAGAACAGCTCATCGAAAAAATTCGGGCACCGATGCTCGAATATGGTCGCGGTTTACTCCAAACGAATGGGGAAGTCGG GCTACACGGATTCAACCACCAACCACTCGTCATGGGAGATGAAACCATGGACCCTGAACTCGGCTATACGAGATGGAAAG ACCAAGACGCCATGCGTTCGGCCATCGATCGTGTCGTCGAGGCGTTCGACTACTACTTGCCGAATGAGCGGATTCGGAGC TACGTGCCACCATCAAACATCATCGGTCAATCCGGACTCGAAGTGTTGAACGAGAAGTTTCCGAAAGGGTTGATCGTCGC AGGACTCTACAGCGGAGATGCGACGAAAGGAAGTTACATTCAAGAGTTCGGGCCCGACCCGGTCTACCCGAACTTGTACG ATTTCCCTCGCGTGTCGAGCGGATACAACGAGACACCGGATGACCTATTTGTCGTCATTGACGCCGTCGCCAACTTCGGG CTCGTTTCTCACTTCATTCACCCGGATGACGTGTTAGATGACGATCGCTCGAAAGGGAAAGGGTGGGAGATGATGAAAGA ATCGTTTGAAGGACTATTCCAGACACTCTACGCCAAATATCCACATCTCGAGGGCTTGAGCCAATATGATGCATATCGGA AATACAAGTTATATCAAGATGCGCAAATCGATGTGGCTTACACGAATGATGCCATCGATATCAATGCCCAACAACTGCCT GTCCCGTCAACGTTACTCGTCCGTGTCCAACCTGGGAAACGTCTCGATACAGGGACATTTGATTTTGGGGAAGTCCAGCC GTTTGATGAAAATGGTACATTGTATCAAGTTGAATTGAGAGACACATCTGTTCGTCTCCCGATATTGGAGGATCGTCCAT GA
Upstream 100 bases:
>100_bases CCCTGCGTCCGACCCTCGACCGCCTGCATCAACATCTCGATTTGCAAGACATTCCAGAGGACTATCGCTTTGTCATTCAA CAGTTAGAAGGTGCCCATAT
Downstream 100 bases:
>100_bases AAATAGGAATTGTTGTCGAAGGGAGTTATCCATATGTGAGCGGTGGCGTATCGAGCTGGGTTCACATGCTGATGGAACAG ATGCCGATGCATGAGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MNKSITTYIASLFSLLIAMIVVVQFLRLDYGHRLIPKEAHEPKSFTTLAGEVRAVEGEPVQIYIHQNDDDLSTAVLNNFK YALDYAKLPYTSIEAEAIASIEPSPRHVLVVSGENTKSWPYEAIRSFVEKGGRLYVAGRFIDQDWADLVGVSDFGDFKDG VNGLIFEQEIFPGYVDLPQDSGLFVHSIADVKLKEEADVLISAKNEPILWQSPYGKGEVMFWNTTSLTDKNSRGLMVQTL SMLFPAFVMPQAGIKVVHLDDFPAPVPNYLNPVITKEYDLSIKEFFSEIWWKDMKQIGADYDVTYSGFLIGSYKATNEET TEQLIEKIRAPMLEYGRGLLQTNGEVGLHGFNHQPLVMGDETMDPELGYTRWKDQDAMRSAIDRVVEAFDYYLPNERIRS YVPPSNIIGQSGLEVLNEKFPKGLIVAGLYSGDATKGSYIQEFGPDPVYPNLYDFPRVSSGYNETPDDLFVVIDAVANFG LVSHFIHPDDVLDDDRSKGKGWEMMKESFEGLFQTLYAKYPHLEGLSQYDAYRKYKLYQDAQIDVAYTNDAIDINAQQLP VPSTLLVRVQPGKRLDTGTFDFGEVQPFDENGTLYQVELRDTSVRLPILEDRP
Sequences:
>Translated_613_residues MNKSITTYIASLFSLLIAMIVVVQFLRLDYGHRLIPKEAHEPKSFTTLAGEVRAVEGEPVQIYIHQNDDDLSTAVLNNFK YALDYAKLPYTSIEAEAIASIEPSPRHVLVVSGENTKSWPYEAIRSFVEKGGRLYVAGRFIDQDWADLVGVSDFGDFKDG VNGLIFEQEIFPGYVDLPQDSGLFVHSIADVKLKEEADVLISAKNEPILWQSPYGKGEVMFWNTTSLTDKNSRGLMVQTL SMLFPAFVMPQAGIKVVHLDDFPAPVPNYLNPVITKEYDLSIKEFFSEIWWKDMKQIGADYDVTYSGFLIGSYKATNEET TEQLIEKIRAPMLEYGRGLLQTNGEVGLHGFNHQPLVMGDETMDPELGYTRWKDQDAMRSAIDRVVEAFDYYLPNERIRS YVPPSNIIGQSGLEVLNEKFPKGLIVAGLYSGDATKGSYIQEFGPDPVYPNLYDFPRVSSGYNETPDDLFVVIDAVANFG LVSHFIHPDDVLDDDRSKGKGWEMMKESFEGLFQTLYAKYPHLEGLSQYDAYRKYKLYQDAQIDVAYTNDAIDINAQQLP VPSTLLVRVQPGKRLDTGTFDFGEVQPFDENGTLYQVELRDTSVRLPILEDRP >Mature_613_residues MNKSITTYIASLFSLLIAMIVVVQFLRLDYGHRLIPKEAHEPKSFTTLAGEVRAVEGEPVQIYIHQNDDDLSTAVLNNFK YALDYAKLPYTSIEAEAIASIEPSPRHVLVVSGENTKSWPYEAIRSFVEKGGRLYVAGRFIDQDWADLVGVSDFGDFKDG VNGLIFEQEIFPGYVDLPQDSGLFVHSIADVKLKEEADVLISAKNEPILWQSPYGKGEVMFWNTTSLTDKNSRGLMVQTL SMLFPAFVMPQAGIKVVHLDDFPAPVPNYLNPVITKEYDLSIKEFFSEIWWKDMKQIGADYDVTYSGFLIGSYKATNEET TEQLIEKIRAPMLEYGRGLLQTNGEVGLHGFNHQPLVMGDETMDPELGYTRWKDQDAMRSAIDRVVEAFDYYLPNERIRS YVPPSNIIGQSGLEVLNEKFPKGLIVAGLYSGDATKGSYIQEFGPDPVYPNLYDFPRVSSGYNETPDDLFVVIDAVANFG LVSHFIHPDDVLDDDRSKGKGWEMMKESFEGLFQTLYAKYPHLEGLSQYDAYRKYKLYQDAQIDVAYTNDAIDINAQQLP VPSTLLVRVQPGKRLDTGTFDFGEVQPFDENGTLYQVELRDTSVRLPILEDRP
Specific function: Unknown
COG id: COG4878
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69236; Mature: 69236
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSITTYIASLFSLLIAMIVVVQFLRLDYGHRLIPKEAHEPKSFTTLAGEVRAVEGEPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCE QIYIHQNDDDLSTAVLNNFKYALDYAKLPYTSIEAEAIASIEPSPRHVLVVSGENTKSWP EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCC YEAIRSFVEKGGRLYVAGRFIDQDWADLVGVSDFGDFKDGVNGLIFEQEIFPGYVDLPQD HHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCCCCCHHHCCCCEEEEHHHCCCEEECCCC SGLFVHSIADVKLKEEADVLISAKNEPILWQSPYGKGEVMFWNTTSLTDKNSRGLMVQTL CCEEEEEEECEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHH SMLFPAFVMPQAGIKVVHLDDFPAPVPNYLNPVITKEYDLSIKEFFSEIWWKDMKQIGAD HHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC YDVTYSGFLIGSYKATNEETTEQLIEKIRAPMLEYGRGLLQTNGEVGLHGFNHQPLVMGD CCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCEEECC ETMDPELGYTRWKDQDAMRSAIDRVVEAFDYYLPNERIRSYVPPSNIIGQSGLEVLNEKF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCHHHHHHHHHHC PKGLIVAGLYSGDATKGSYIQEFGPDPVYPNLYDFPRVSSGYNETPDDLFVVIDAVANFG CCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LVSHFIHPDDVLDDDRSKGKGWEMMKESFEGLFQTLYAKYPHLEGLSQYDAYRKYKLYQD HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECC AQIDVAYTNDAIDINAQQLPVPSTLLVRVQPGKRLDTGTFDFGEVQPFDENGTLYQVELR CEEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEE DTSVRLPILEDRP CCEEEECCCCCCC >Mature Secondary Structure MNKSITTYIASLFSLLIAMIVVVQFLRLDYGHRLIPKEAHEPKSFTTLAGEVRAVEGEPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCE QIYIHQNDDDLSTAVLNNFKYALDYAKLPYTSIEAEAIASIEPSPRHVLVVSGENTKSWP EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCC YEAIRSFVEKGGRLYVAGRFIDQDWADLVGVSDFGDFKDGVNGLIFEQEIFPGYVDLPQD HHHHHHHHHCCCEEEEEEEECCCCHHHHCCCCCCCCHHHCCCCEEEEHHHCCCEEECCCC SGLFVHSIADVKLKEEADVLISAKNEPILWQSPYGKGEVMFWNTTSLTDKNSRGLMVQTL CCEEEEEEECEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHH SMLFPAFVMPQAGIKVVHLDDFPAPVPNYLNPVITKEYDLSIKEFFSEIWWKDMKQIGAD HHHHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC YDVTYSGFLIGSYKATNEETTEQLIEKIRAPMLEYGRGLLQTNGEVGLHGFNHQPLVMGD CCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCEEECC ETMDPELGYTRWKDQDAMRSAIDRVVEAFDYYLPNERIRSYVPPSNIIGQSGLEVLNEKF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCHHHHHHHHHHC PKGLIVAGLYSGDATKGSYIQEFGPDPVYPNLYDFPRVSSGYNETPDDLFVVIDAVANFG CCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LVSHFIHPDDVLDDDRSKGKGWEMMKESFEGLFQTLYAKYPHLEGLSQYDAYRKYKLYQD HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECC AQIDVAYTNDAIDINAQQLPVPSTLLVRVQPGKRLDTGTFDFGEVQPFDENGTLYQVELR CEEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEE DTSVRLPILEDRP CCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA