| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is wcaL [C]
Identifier: 229916937
GI number: 229916937
Start: 1185180
End: 1186598
Strand: Reverse
Name: wcaL [C]
Synonym: EAT1b_1211
Alternate gene names: 229916937
Gene position: 1186598-1185180 (Counterclockwise)
Preceding gene: 229916938
Following gene: 229916936
Centisome position: 39.55
GC content: 53.21
Gene sequence:
>1419_bases ATGAAAATAGGAATTGTTGTCGAAGGGAGTTATCCATATGTGAGCGGTGGCGTATCGAGCTGGGTTCACATGCTGATGGA ACAGATGCCGATGCATGAGTTTGAGATTATCTCGATCATGCCGAACCCGAAGTCAGAAGCCGATTACCGTTACACGTTAC CGAAGAACGTCACGGGCGTCACCACGCTCGCCCTCAATCAACGGGCGACACGGAAACGTCGACCGGAAGCGTTATCGGAG TCGGAACGGGAGCGAATCAAGACGTGGATGACATTCGGTCAAGTCGATTCGTCCATCTATCCGATTCTTGAAAATCAAAT TGGGACACCGGAACAGTTCTTCTCGAGTCGTCTCTTCTATCAGCTCGTCACGGAGAGCTATCAGGAAGAAGGACAGGCCG GTTCGTTCATCGATTACTTTTGGATGTGGCGCAGTATGTATGCCCCTGTCCTTGATTTGCTTCAAGCCGAATTACCTCAA GTCGACCTCGTGCACGCGGCCTCGACCGGATACGCGGGTCTGATTGCGAGTGCGATGAAAGAACGACAGAACATTCCGTT TCTGTTGACCGAACACGGCATCTATTCCCGTGAGCGGGAAGAAGAACTGTTACAGGCATCTTGGATCCCGTCTGAGTTTC GCTCCCATTGGATCCAGTTCTTCCACCATATTTCCCGGGAAGCGTATCGGAAGGCGGATGACGTCATCACGCTCTTTGAA CGAAACGGCGAGTTGCAACGTCAGCTCGGGGCACCTGTTGAAAAATTGAGCATCATTCCGAACGGGATTGACGTGACGGG CTTATCTGCCCTCGGGCATGTGCCGGGAGCGGATAAACTACGAATCGGTGCCATCGTTCGCGTCGTTCCGATCAAAGACA TTAAAACGATGATCTATGCGGCGAAACTGCTACAAGACATGCTCGTCCCGTTCGAACTGACCATTATGGGACCGCTTGAT GAGGATAAGGAGTATGCGGCGGAGTGTGAAATGCTCATCCGGCAACTCGAGCTCGAACGGTCCGTCTTGATGGTCGGAAA AGTCGATATTCGACAACACCTTCCCGAATTCGATGTGTGTTTGTTGACGAGTATTTCTGAAGGACAACCCCTCGCCGTAC TAGAAGGGATGGCCGCCGGCGTCCCATGGATTGTGACGGACGTTGGGGCATGTGCGGAACTCGTGAACGGGCGACCGGAT GAACCGTTCGGTCCGGCCGGATTCGTCGTCCCGCCGGTCAATCCACGCCGAATCGCAGAGCGTTGCGTCTGGTTCCATCA ACATCGTGAGGATGCGCGCCGACTCGGACGAAACGGGCAACAGCGAGTCGAGACGTATTATCGCACCGACCAGTTCATCG ATGCATATCTACACTTATATGAAGAGAGGAGAGCGGTATATGGCGGGCATCGGGTTTAA
Upstream 100 bases:
>100_bases TTGATTTTGGGGAAGTCCAGCCGTTTGATGAAAATGGTACATTGTATCAAGTTGAATTGAGAGACACATCTGTTCGTCTC CCGATATTGGAGGATCGTCC
Downstream 100 bases:
>100_bases GTTACAACAGTTGTTTCAAGAAGACTACTTCTCCTCGCGGATCAAAGCGTACGCATTTGCCGGTCTCGTCACATCCGGAC CATGGCTGATCGTCATCGTC
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis Protein-Related Protein; Glycosyl Transferase Group 1 Family Protein; Transferase; Group 1 Glycosyl Transferase; Glycosyltransferase I; Lipopolysaccharide Glycosyltransferase; Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; ABC Transporter Permease; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide N- Acetylglucosaminyltransferase; Lipopolysaccharide N-Acetylglucosaminyl Transferase; Glycosyl Transferase GT4 Family Protein
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MKIGIVVEGSYPYVSGGVSSWVHMLMEQMPMHEFEIISIMPNPKSEADYRYTLPKNVTGVTTLALNQRATRKRRPEALSE SERERIKTWMTFGQVDSSIYPILENQIGTPEQFFSSRLFYQLVTESYQEEGQAGSFIDYFWMWRSMYAPVLDLLQAELPQ VDLVHAASTGYAGLIASAMKERQNIPFLLTEHGIYSREREEELLQASWIPSEFRSHWIQFFHHISREAYRKADDVITLFE RNGELQRQLGAPVEKLSIIPNGIDVTGLSALGHVPGADKLRIGAIVRVVPIKDIKTMIYAAKLLQDMLVPFELTIMGPLD EDKEYAAECEMLIRQLELERSVLMVGKVDIRQHLPEFDVCLLTSISEGQPLAVLEGMAAGVPWIVTDVGACAELVNGRPD EPFGPAGFVVPPVNPRRIAERCVWFHQHREDARRLGRNGQQRVETYYRTDQFIDAYLHLYEERRAVYGGHRV
Sequences:
>Translated_472_residues MKIGIVVEGSYPYVSGGVSSWVHMLMEQMPMHEFEIISIMPNPKSEADYRYTLPKNVTGVTTLALNQRATRKRRPEALSE SERERIKTWMTFGQVDSSIYPILENQIGTPEQFFSSRLFYQLVTESYQEEGQAGSFIDYFWMWRSMYAPVLDLLQAELPQ VDLVHAASTGYAGLIASAMKERQNIPFLLTEHGIYSREREEELLQASWIPSEFRSHWIQFFHHISREAYRKADDVITLFE RNGELQRQLGAPVEKLSIIPNGIDVTGLSALGHVPGADKLRIGAIVRVVPIKDIKTMIYAAKLLQDMLVPFELTIMGPLD EDKEYAAECEMLIRQLELERSVLMVGKVDIRQHLPEFDVCLLTSISEGQPLAVLEGMAAGVPWIVTDVGACAELVNGRPD EPFGPAGFVVPPVNPRRIAERCVWFHQHREDARRLGRNGQQRVETYYRTDQFIDAYLHLYEERRAVYGGHRV >Mature_472_residues MKIGIVVEGSYPYVSGGVSSWVHMLMEQMPMHEFEIISIMPNPKSEADYRYTLPKNVTGVTTLALNQRATRKRRPEALSE SERERIKTWMTFGQVDSSIYPILENQIGTPEQFFSSRLFYQLVTESYQEEGQAGSFIDYFWMWRSMYAPVLDLLQAELPQ VDLVHAASTGYAGLIASAMKERQNIPFLLTEHGIYSREREEELLQASWIPSEFRSHWIQFFHHISREAYRKADDVITLFE RNGELQRQLGAPVEKLSIIPNGIDVTGLSALGHVPGADKLRIGAIVRVVPIKDIKTMIYAAKLLQDMLVPFELTIMGPLD EDKEYAAECEMLIRQLELERSVLMVGKVDIRQHLPEFDVCLLTSISEGQPLAVLEGMAAGVPWIVTDVGACAELVNGRPD EPFGPAGFVVPPVNPRRIAERCVWFHQHREDARRLGRNGQQRVETYYRTDQFIDAYLHLYEERRAVYGGHRV
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 53877; Mature: 53877
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIVVEGSYPYVSGGVSSWVHMLMEQMPMHEFEIISIMPNPKSEADYRYTLPKNVTGV CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC TTLALNQRATRKRRPEALSESERERIKTWMTFGQVDSSIYPILENQIGTPEQFFSSRLFY EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH QLVTESYQEEGQAGSFIDYFWMWRSMYAPVLDLLQAELPQVDLVHAASTGYAGLIASAMK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH ERQNIPFLLTEHGIYSREREEELLQASWIPSEFRSHWIQFFHHISREAYRKADDVITLFE HHCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH RNGELQRQLGAPVEKLSIIPNGIDVTGLSALGHVPGADKLRIGAIVRVVPIKDIKTMIYA CCCHHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCEEECEEEEEEEHHHHHHHHHH AKLLQDMLVPFELTIMGPLDEDKEYAAECEMLIRQLELERSVLMVGKVDIRQHLPEFDVC HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCEE LLTSISEGQPLAVLEGMAAGVPWIVTDVGACAELVNGRPDEPFGPAGFVVPPVNPRRIAE EEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHH RCVWFHQHREDARRLGRNGQQRVETYYRTDQFIDAYLHLYEERRAVYGGHRV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIGIVVEGSYPYVSGGVSSWVHMLMEQMPMHEFEIISIMPNPKSEADYRYTLPKNVTGV CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC TTLALNQRATRKRRPEALSESERERIKTWMTFGQVDSSIYPILENQIGTPEQFFSSRLFY EEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH QLVTESYQEEGQAGSFIDYFWMWRSMYAPVLDLLQAELPQVDLVHAASTGYAGLIASAMK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH ERQNIPFLLTEHGIYSREREEELLQASWIPSEFRSHWIQFFHHISREAYRKADDVITLFE HHCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH RNGELQRQLGAPVEKLSIIPNGIDVTGLSALGHVPGADKLRIGAIVRVVPIKDIKTMIYA CCCHHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCEEECEEEEEEEHHHHHHHHHH AKLLQDMLVPFELTIMGPLDEDKEYAAECEMLIRQLELERSVLMVGKVDIRQHLPEFDVC HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCEE LLTSISEGQPLAVLEGMAAGVPWIVTDVGACAELVNGRPDEPFGPAGFVVPPVNPRRIAE EEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHH RCVWFHQHREDARRLGRNGQQRVETYYRTDQFIDAYLHLYEERRAVYGGHRV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA