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The map label for this gene is lytR [H]

Identifier: 229916930

GI number: 229916930

Start: 1178417

End: 1179340

Strand: Reverse

Name: lytR [H]

Synonym: EAT1b_1204

Alternate gene names: 229916930

Gene position: 1179340-1178417 (Counterclockwise)

Preceding gene: 229916931

Following gene: 229916929

Centisome position: 39.31

GC content: 51.95

Gene sequence:

>924_bases
ATGGCGAAACATCGTAAACCATCGAAGTGGAAAATCGTACTAGGGGTTGTAGCAGGCGTCATGGCCTTGGTGCTCATCAC
AGGTGGCGCGTTCGTCTGGTCAATGGTAAAAGAAGTCGATGACACCGTCGCACAAGTGAATGACAACTTGAACATCAGCA
AAGAGCGTAAACAGGTCGAGACCATTGAACGCAAAGAGTCGGTTTCCATTCTCTTGCTTGGAATCGACCGACGCGGGACC
GAACAGGGACGAAGTGACTCAATCATCGTGCTGACACTCAATCCGGAGCTCGATGAAGGCGCGATGCTCTCGATTCCTCG
GGATACATTGACCGAAATCGTTGGGAAAGGGACGCGCGATAAGATCAATCACGCCTATGCGTTCGGAGGGGCCGAAATGG
CTATGAATACGGTCGAGAATTTCCTCGAGATCCCAATCGATTATGTCATCGAGACGGATATGGAGGCATTCAGCGACGTG
GTGGATGCACTCGGAGGCATCACGGTCATGAATAAATTCGCGTTCTCGACAGAAGATTACACGTTTCCCGTCGGTGAAGT
GACGCTAGACGGAGAAGCGGCACTCGATTATACGCGGATGCGCTATAACGATCCAAACGGTGACTTCGGTCGTCAAGAAC
GTCAGCGGGATGTCGTCGCCGCCATCATTGAAAAAGGACGGACGGACTTCTCGCTAGACAAGGTCACTGCCTTACTGGAG
GTCGTCGGTGACCAGGCGAAGACGAATATCGAACTCAATGAATTCGTCTCATTGTCGACGGACTATATGAACGCGTTCCG
CAATGCGAGTGTGTTACGGCTCGAGGGGGCTGGCGGATTAGCGGGGGACGGGATCTATTACTGGAATCCGGATTCTACTT
CGTTGAATGGCGTTCGGGAAGAGTTGCAACGATTGATGGAGTAA

Upstream 100 bases:

>100_bases
AAAAAAAGGGATATCATGATTATTCTTTGTGAACATGCTTTAAAACAACCCGTGGCATGGGAATAAACTAGTACAATTTC
ACGGAAGAAGGTGTGGCCAC

Downstream 100 bases:

>100_bases
GCTGTCTGACTCAAGTCGGACAGTTTTTTTGTGTTTCAAAGGGGACGGAAAGTGGGAGAAATAAAGAGATGCCAAGGAGG
GATGAGTCATGAAATGGGAA

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAKHRKPSKWKIVLGVVAGVMALVLITGGAFVWSMVKEVDDTVAQVNDNLNISKERKQVETIERKESVSILLLGIDRRGT
EQGRSDSIIVLTLNPELDEGAMLSIPRDTLTEIVGKGTRDKINHAYAFGGAEMAMNTVENFLEIPIDYVIETDMEAFSDV
VDALGGITVMNKFAFSTEDYTFPVGEVTLDGEAALDYTRMRYNDPNGDFGRQERQRDVVAAIIEKGRTDFSLDKVTALLE
VVGDQAKTNIELNEFVSLSTDYMNAFRNASVLRLEGAGGLAGDGIYYWNPDSTSLNGVREELQRLME

Sequences:

>Translated_307_residues
MAKHRKPSKWKIVLGVVAGVMALVLITGGAFVWSMVKEVDDTVAQVNDNLNISKERKQVETIERKESVSILLLGIDRRGT
EQGRSDSIIVLTLNPELDEGAMLSIPRDTLTEIVGKGTRDKINHAYAFGGAEMAMNTVENFLEIPIDYVIETDMEAFSDV
VDALGGITVMNKFAFSTEDYTFPVGEVTLDGEAALDYTRMRYNDPNGDFGRQERQRDVVAAIIEKGRTDFSLDKVTALLE
VVGDQAKTNIELNEFVSLSTDYMNAFRNASVLRLEGAGGLAGDGIYYWNPDSTSLNGVREELQRLME
>Mature_306_residues
AKHRKPSKWKIVLGVVAGVMALVLITGGAFVWSMVKEVDDTVAQVNDNLNISKERKQVETIERKESVSILLLGIDRRGTE
QGRSDSIIVLTLNPELDEGAMLSIPRDTLTEIVGKGTRDKINHAYAFGGAEMAMNTVENFLEIPIDYVIETDMEAFSDVV
DALGGITVMNKFAFSTEDYTFPVGEVTLDGEAALDYTRMRYNDPNGDFGRQERQRDVVAAIIEKGRTDFSLDKVTALLEV
VGDQAKTNIELNEFVSLSTDYMNAFRNASVLRLEGAGGLAGDGIYYWNPDSTSLNGVREELQRLME

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 33960; Mature: 33829

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHRKPSKWKIVLGVVAGVMALVLITGGAFVWSMVKEVDDTVAQVNDNLNISKERKQVE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TIERKESVSILLLGIDRRGTEQGRSDSIIVLTLNPELDEGAMLSIPRDTLTEIVGKGTRD
HHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCCHH
KINHAYAFGGAEMAMNTVENFLEIPIDYVIETDMEAFSDVVDALGGITVMNKFAFSTEDY
HHHHHHEECCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCC
TFPVGEVTLDGEAALDYTRMRYNDPNGDFGRQERQRDVVAAIIEKGRTDFSLDKVTALLE
EECCCCEEECCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVGDQAKTNIELNEFVSLSTDYMNAFRNASVLRLEGAGGLAGDGIYYWNPDSTSLNGVRE
HHCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHH
ELQRLME
HHHHHCC
>Mature Secondary Structure 
AKHRKPSKWKIVLGVVAGVMALVLITGGAFVWSMVKEVDDTVAQVNDNLNISKERKQVE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TIERKESVSILLLGIDRRGTEQGRSDSIIVLTLNPELDEGAMLSIPRDTLTEIVGKGTRD
HHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCCHH
KINHAYAFGGAEMAMNTVENFLEIPIDYVIETDMEAFSDVVDALGGITVMNKFAFSTEDY
HHHHHHEECCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCC
TFPVGEVTLDGEAALDYTRMRYNDPNGDFGRQERQRDVVAAIIEKGRTDFSLDKVTALLE
EECCCCEEECCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVGDQAKTNIELNEFVSLSTDYMNAFRNASVLRLEGAGGLAGDGIYYWNPDSTSLNGVRE
HHCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHH
ELQRLME
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA