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The map label for this gene is spsC [H]

Identifier: 229916913

GI number: 229916913

Start: 1156700

End: 1157821

Strand: Reverse

Name: spsC [H]

Synonym: EAT1b_1186

Alternate gene names: 229916913

Gene position: 1157821-1156700 (Counterclockwise)

Preceding gene: 229916914

Following gene: 229916912

Centisome position: 38.6

GC content: 54.99

Gene sequence:

>1122_bases
ATGAGTGGTTCAAATGTAGAAACAGATGCCGTCATTCCCGTCACACGACCGAGTATGCCGGATTTTGATACGTATGTCGA
GATGATTCGTCCCCTTTGGGAATCGCGTCACTTGAGCAACCGTGGCGAGAATGTGCGGGCATTAGAAGAAGAGTTAGAGC
AGCGTCTCCACGTCCCGCACGTCTCCTTATTGACGAACGGTCATCTGGCCCTCGAAACGGCGATTGATGTGCTCGGGTTG
ACAGGTGAGGTCATCACGACGCCGTTCACGTTCGCCTCGACGACGCATGCGCTCATCCGAAAACAGATCACCCCTGTCTT
TTGTGACATCAACCCCGTCGACTACACGATCGACGTCAACAAAATCGAGGCGTTGATCACGGAACGGACGACGGCCATCC
TACCCGTTCATGTGTATGGGAACGTATGTGACGTGGAGGCGATCGAACAACTCGCGAAACGCCATGGGCTCCGTGTCCTC
TACGATGCGGCGCACGCGTTCGGTGTCCGGCACGACGGGCGCGACGTCTCGACGTTCGGCGACCTGACGATGTTCAGCTT
TCATGCGACAAAAGTGTTTCACACGATTGAGGGTGGCGCGCTCACGTTCCGGGATGCCCGTTACGTCGAAGCGATTCATC
AAGCCGTCAACTTTGGGATCACCGGACCAGAATCCGTCGAATCGGTCGGGGGCAACGCCAAGATGAACGAGTTTCAGGCG
GCGATGGGACGGTGCAACCTCCCACGGATCGATGCCGACATTGAAAAGCGGAAACGTCTGGTCGAGCGATACGACACCCG
TTTAGGGAATGCTTCGTTTCTGCGCTTGAACCTTCGGAATGAACGGACCGAGTCCAACTATGCGTACTATCCGGTTCTCG
TCACGAAAGGGAGAGCGGCACGCGATGACATGATGGCATACTTAGCGCAGCATGGGATTCTCGCCCGGAAGTATTTTTAT
CCGCTCGTGACCGATTTTTCCTGCTACGCATTCGACGCATCTGTACCGAACGCCACGTACGTCTCGGATCGGGTGATCAC
GTTACCTCTTTATCCGGACATGACAATGGAGATGGTCGACCGCATTTGTGACGTAATCCTTGAAGGAGGGAATGAACGAT
GA

Upstream 100 bases:

>100_bases
GACCTTACCTGATGATTAAGCAGCCACATTTAACGGAGTGGCTGATTAAAATACGAAATCGGGCATTCGCTTGAACGAAA
GGAAAAGGGGTGATTTCACC

Downstream 100 bases:

>100_bases
AAGGAATCATTCTAGCGGGTGGGAACGGGACGCGTCTCTACCCGATGACGAAAGCAGTCTCGAAACAGCTGTTGCCAATC
TACGACAAGCCCCTCATCTA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSGSNVETDAVIPVTRPSMPDFDTYVEMIRPLWESRHLSNRGENVRALEEELEQRLHVPHVSLLTNGHLALETAIDVLGL
TGEVITTPFTFASTTHALIRKQITPVFCDINPVDYTIDVNKIEALITERTTAILPVHVYGNVCDVEAIEQLAKRHGLRVL
YDAAHAFGVRHDGRDVSTFGDLTMFSFHATKVFHTIEGGALTFRDARYVEAIHQAVNFGITGPESVESVGGNAKMNEFQA
AMGRCNLPRIDADIEKRKRLVERYDTRLGNASFLRLNLRNERTESNYAYYPVLVTKGRAARDDMMAYLAQHGILARKYFY
PLVTDFSCYAFDASVPNATYVSDRVITLPLYPDMTMEMVDRICDVILEGGNER

Sequences:

>Translated_373_residues
MSGSNVETDAVIPVTRPSMPDFDTYVEMIRPLWESRHLSNRGENVRALEEELEQRLHVPHVSLLTNGHLALETAIDVLGL
TGEVITTPFTFASTTHALIRKQITPVFCDINPVDYTIDVNKIEALITERTTAILPVHVYGNVCDVEAIEQLAKRHGLRVL
YDAAHAFGVRHDGRDVSTFGDLTMFSFHATKVFHTIEGGALTFRDARYVEAIHQAVNFGITGPESVESVGGNAKMNEFQA
AMGRCNLPRIDADIEKRKRLVERYDTRLGNASFLRLNLRNERTESNYAYYPVLVTKGRAARDDMMAYLAQHGILARKYFY
PLVTDFSCYAFDASVPNATYVSDRVITLPLYPDMTMEMVDRICDVILEGGNER
>Mature_372_residues
SGSNVETDAVIPVTRPSMPDFDTYVEMIRPLWESRHLSNRGENVRALEEELEQRLHVPHVSLLTNGHLALETAIDVLGLT
GEVITTPFTFASTTHALIRKQITPVFCDINPVDYTIDVNKIEALITERTTAILPVHVYGNVCDVEAIEQLAKRHGLRVLY
DAAHAFGVRHDGRDVSTFGDLTMFSFHATKVFHTIEGGALTFRDARYVEAIHQAVNFGITGPESVESVGGNAKMNEFQAA
MGRCNLPRIDADIEKRKRLVERYDTRLGNASFLRLNLRNERTESNYAYYPVLVTKGRAARDDMMAYLAQHGILARKYFYP
LVTDFSCYAFDASVPNATYVSDRVITLPLYPDMTMEMVDRICDVILEGGNER

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=27.8514588859416, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI2367285, Length=367, Percent_Identity=28.0653950953678, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41937; Mature: 41806

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSNVETDAVIPVTRPSMPDFDTYVEMIRPLWESRHLSNRGENVRALEEELEQRLHVPH
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCE
VSLLTNGHLALETAIDVLGLTGEVITTPFTFASTTHALIRKQITPVFCDINPVDYTIDVN
EEEEECCCCHHHHHHHHHCCCCCCEECCEEHHHHHHHHHHHCCCEEEEECCCCEEEEEHH
KIEALITERTTAILPVHVYGNVCDVEAIEQLAKRHGLRVLYDAAHAFGVRHDGRDVSTFG
HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCC
DLTMFSFHATKVFHTIEGGALTFRDARYVEAIHQAVNFGITGPESVESVGGNAKMNEFQA
CCCEEEHHHHHHEEEECCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH
AMGRCNLPRIDADIEKRKRLVERYDTRLGNASFLRLNLRNERTESNYAYYPVLVTKGRAA
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCH
RDDMMAYLAQHGILARKYFYPLVTDFSCYAFDASVPNATYVSDRVITLPLYPDMTMEMVD
HHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCEEEEEECCCCCHHHHHH
RICDVILEGGNER
HHHHHHHCCCCCC
>Mature Secondary Structure 
SGSNVETDAVIPVTRPSMPDFDTYVEMIRPLWESRHLSNRGENVRALEEELEQRLHVPH
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCE
VSLLTNGHLALETAIDVLGLTGEVITTPFTFASTTHALIRKQITPVFCDINPVDYTIDVN
EEEEECCCCHHHHHHHHHCCCCCCEECCEEHHHHHHHHHHHCCCEEEEECCCCEEEEEHH
KIEALITERTTAILPVHVYGNVCDVEAIEQLAKRHGLRVLYDAAHAFGVRHDGRDVSTFG
HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCC
DLTMFSFHATKVFHTIEGGALTFRDARYVEAIHQAVNFGITGPESVESVGGNAKMNEFQA
CCCEEEHHHHHHEEEECCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH
AMGRCNLPRIDADIEKRKRLVERYDTRLGNASFLRLNLRNERTESNYAYYPVLVTKGRAA
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCH
RDDMMAYLAQHGILARKYFYPLVTDFSCYAFDASVPNATYVSDRVITLPLYPDMTMEMVD
HHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCEEEEEECCCCCHHHHHH
RICDVILEGGNER
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]