| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916910
Identifier: 229916910
GI number: 229916910
Start: 1153752
End: 1154732
Strand: Reverse
Name: 229916910
Synonym: EAT1b_1183
Alternate gene names: NA
Gene position: 1154732-1153752 (Counterclockwise)
Preceding gene: 229916911
Following gene: 229916909
Centisome position: 38.49
GC content: 52.8
Gene sequence:
>981_bases ATGGTGATGGTCAGCATCGACTGCATCACGTATAACCACGAACCGTACATCGCCAAAACGATTGAAGGATTCTTGATGCA GGAAACGGATTTTGATTTCGAGATCCTGATTCATGAGGATGCCTCAACGGATCGGACGGCGGACATCGTGCGCGAATATG AAGAACAGCATCCGGACCGGATTCGGGTCATCTATCAAACGGAAAACCAATATTCTCAAGGGGTCATGGTGAATCTGTTG AACGAAGAGAGGGCGCGTGGCAAGTACATCGCCCTTTGTGACGGGGACGACTACTGGACCGACCCACACAAGTTGCAGAA ACAAGTCGACTATATGGAAGCCCATCCGGACTGTACGCTCTGTTTTCATGACGCGTATGTCGAAACGGACGACACACTCC ATACCGGATGGCGCGTCATCCCGTGGATGCCTGAAAACAGAAAGTATGCCTCGACGGAGCCGCGGACCTATCATGCCGGG GAGTTACAGCTACTCGGCTTCATTCCGACGATGTCCATGTTGTACCGGAATGGACTGACAGACGATCTGTTAGATTGGAT CGGCGATACGCCCGCCTTCGACGGCGCGCTCAAACTGCACGTCGCAAGCAAAGGTTACGCCTACTACATGCCTGAGGTGA TGAGCGTATACCGATTCGGTGTGTCCGGGTCGGTCACCACCAAGTGGCGTCAACGAAACAGGGAGCGCGATATTGAGCGG ATGGAGGCATTCATCCGAATGATGGATGCTTTCGATTCCTATACGGACGGCAGATTTCATCAAGAAATCGAAATTTCTCG CTTATCGTTCGAGGTCGGCTTGCATCGGCTCCGACGAGATTTTCAAGCGCTGAAGTCACCCCGGTATGACCGATATGTGG AGCGTTTCGTCGGGAGAGAGCGGCTACGTCCCTACTTGATGGTGCGACATCCGCATTTGATGGAGTGGTTGATTCGCATG CGCTCGTTCCAGCTCGGTTAA
Upstream 100 bases:
>100_bases TCGAGCGCATCGTTTCGGGAGCGTATAAAACTTATTATCAAGACATCTATTCTTCCTAAGTCTGAGTCGTTCTATCATCC CGAGAAAGGAGGGGATCGAC
Downstream 100 bases:
>100_bases GGGAGGCGGCTCAAATGAAATTAGGGATCATGCAGCCGTACTACTTCCCATACCTCGGTTATATTCAATTGATGAACGCG GTGGACCAGTTCGTCATCTT
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVMVSIDCITYNHEPYIAKTIEGFLMQETDFDFEILIHEDASTDRTADIVREYEEQHPDRIRVIYQTENQYSQGVMVNLL NEERARGKYIALCDGDDYWTDPHKLQKQVDYMEAHPDCTLCFHDAYVETDDTLHTGWRVIPWMPENRKYASTEPRTYHAG ELQLLGFIPTMSMLYRNGLTDDLLDWIGDTPAFDGALKLHVASKGYAYYMPEVMSVYRFGVSGSVTTKWRQRNRERDIER MEAFIRMMDAFDSYTDGRFHQEIEISRLSFEVGLHRLRRDFQALKSPRYDRYVERFVGRERLRPYLMVRHPHLMEWLIRM RSFQLG
Sequences:
>Translated_326_residues MVMVSIDCITYNHEPYIAKTIEGFLMQETDFDFEILIHEDASTDRTADIVREYEEQHPDRIRVIYQTENQYSQGVMVNLL NEERARGKYIALCDGDDYWTDPHKLQKQVDYMEAHPDCTLCFHDAYVETDDTLHTGWRVIPWMPENRKYASTEPRTYHAG ELQLLGFIPTMSMLYRNGLTDDLLDWIGDTPAFDGALKLHVASKGYAYYMPEVMSVYRFGVSGSVTTKWRQRNRERDIER MEAFIRMMDAFDSYTDGRFHQEIEISRLSFEVGLHRLRRDFQALKSPRYDRYVERFVGRERLRPYLMVRHPHLMEWLIRM RSFQLG >Mature_326_residues MVMVSIDCITYNHEPYIAKTIEGFLMQETDFDFEILIHEDASTDRTADIVREYEEQHPDRIRVIYQTENQYSQGVMVNLL NEERARGKYIALCDGDDYWTDPHKLQKQVDYMEAHPDCTLCFHDAYVETDDTLHTGWRVIPWMPENRKYASTEPRTYHAG ELQLLGFIPTMSMLYRNGLTDDLLDWIGDTPAFDGALKLHVASKGYAYYMPEVMSVYRFGVSGSVTTKWRQRNRERDIER MEAFIRMMDAFDSYTDGRFHQEIEISRLSFEVGLHRLRRDFQALKSPRYDRYVERFVGRERLRPYLMVRHPHLMEWLIRM RSFQLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38824; Mature: 38824
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMVSIDCITYNHEPYIAKTIEGFLMQETDFDFEILIHEDASTDRTADIVREYEEQHPDR CEEEEEEEEEECCCCCHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE IRVIYQTENQYSQGVMVNLLNEERARGKYIALCDGDDYWTDPHKLQKQVDYMEAHPDCTL EEEEEECCCCCCCCCEEEEHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE CFHDAYVETDDTLHTGWRVIPWMPENRKYASTEPRTYHAGELQLLGFIPTMSMLYRNGLT EEECCEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHCCCC DDLLDWIGDTPAFDGALKLHVASKGYAYYMPEVMSVYRFGVSGSVTTKWRQRNRERDIER HHHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHHHHCCCCCCEEHHHHHCCHHHHHHH MEAFIRMMDAFDSYTDGRFHQEIEISRLSFEVGLHRLRRDFQALKSPRYDRYVERFVGRE HHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHH RLRPYLMVRHPHLMEWLIRMRSFQLG HCCCEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MVMVSIDCITYNHEPYIAKTIEGFLMQETDFDFEILIHEDASTDRTADIVREYEEQHPDR CEEEEEEEEEECCCCCHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCE IRVIYQTENQYSQGVMVNLLNEERARGKYIALCDGDDYWTDPHKLQKQVDYMEAHPDCTL EEEEEECCCCCCCCCEEEEHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE CFHDAYVETDDTLHTGWRVIPWMPENRKYASTEPRTYHAGELQLLGFIPTMSMLYRNGLT EEECCEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHCCCC DDLLDWIGDTPAFDGALKLHVASKGYAYYMPEVMSVYRFGVSGSVTTKWRQRNRERDIER HHHHHHCCCCCCCCCEEEEEEECCCCEEECHHHHHHHHCCCCCCEEHHHHHCCHHHHHHH MEAFIRMMDAFDSYTDGRFHQEIEISRLSFEVGLHRLRRDFQALKSPRYDRYVERFVGRE HHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHH RLRPYLMVRHPHLMEWLIRMRSFQLG HCCCEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]