| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916891
Identifier: 229916891
GI number: 229916891
Start: 1132603
End: 1133046
Strand: Direct
Name: 229916891
Synonym: EAT1b_1164
Alternate gene names: NA
Gene position: 1132603-1133046 (Clockwise)
Preceding gene: 229916882
Following gene: 229916895
Centisome position: 37.75
GC content: 49.55
Gene sequence:
>444_bases ATGAACAGCCTAGACATCGCAAGTATCACTTCAATTCCTTCCGCTCAACACGACTTCGACCAAGCCGACCTGACGTTTTC AGCGACCGAATGGGATACATACCGGCCGGAACAAGGAAAACCAATTTCGTATAAAGAGCAACATTTGATTGTCTATCCGC TCAAAGAATTGAGCCGTGCCTTTAGTGTGGCCGGCATCCCACGCAGCCAACAGCAATTGATCAAGTGGGAGACTGATGGC GTCTTGCCGCCGACCCCGTTCACGTTCGGTCGGAAGCGATTCTATACGGAAAATCAGATTCGTACCATTGTCGACATCGC ATTGGAATGCGGATTGCGCCCACGAACGCACGTCAAAAAGACGAACTTCTCCGAATTGGCGCATCATGAACTAACGTACA TATTAAAACTCGAACTAAACGCCTACGAGGCGCCTGTCATCTGA
Upstream 100 bases:
>100_bases CTTTGAAAAAACTGTAAGTTAAAATCTTGTAAATGGGGTACGATACGTAGGAGGACATTTTTGAAATGACCCGTCCGTCT TGAAGAAGGAGATCTATCAT
Downstream 100 bases:
>100_bases ACAGGCAAAAGCCATCCGCCATGAAGGTCATGACGAATGGCTTTTTTACTCACTTTTTCGAAATCGACTGCGGCACGTCC GCACGGGACACTTCCTCATA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNSLDIASITSIPSAQHDFDQADLTFSATEWDTYRPEQGKPISYKEQHLIVYPLKELSRAFSVAGIPRSQQQLIKWETDG VLPPTPFTFGRKRFYTENQIRTIVDIALECGLRPRTHVKKTNFSELAHHELTYILKLELNAYEAPVI
Sequences:
>Translated_147_residues MNSLDIASITSIPSAQHDFDQADLTFSATEWDTYRPEQGKPISYKEQHLIVYPLKELSRAFSVAGIPRSQQQLIKWETDG VLPPTPFTFGRKRFYTENQIRTIVDIALECGLRPRTHVKKTNFSELAHHELTYILKLELNAYEAPVI >Mature_147_residues MNSLDIASITSIPSAQHDFDQADLTFSATEWDTYRPEQGKPISYKEQHLIVYPLKELSRAFSVAGIPRSQQQLIKWETDG VLPPTPFTFGRKRFYTENQIRTIVDIALECGLRPRTHVKKTNFSELAHHELTYILKLELNAYEAPVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16890; Mature: 16890
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLDIASITSIPSAQHDFDQADLTFSATEWDTYRPEQGKPISYKEQHLIVYPLKELSRA CCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH FSVAGIPRSQQQLIKWETDGVLPPTPFTFGRKRFYTENQIRTIVDIALECGLRPRTHVKK HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCC TNFSELAHHELTYILKLELNAYEAPVI CCHHHHHHHCEEEEEEEEECCCCCCCC >Mature Secondary Structure MNSLDIASITSIPSAQHDFDQADLTFSATEWDTYRPEQGKPISYKEQHLIVYPLKELSRA CCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH FSVAGIPRSQQQLIKWETDGVLPPTPFTFGRKRFYTENQIRTIVDIALECGLRPRTHVKK HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCC TNFSELAHHELTYILKLELNAYEAPVI CCHHHHHHHCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA