| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916852
Identifier: 229916852
GI number: 229916852
Start: 1101245
End: 1101811
Strand: Reverse
Name: 229916852
Synonym: EAT1b_1125
Alternate gene names: NA
Gene position: 1101811-1101245 (Counterclockwise)
Preceding gene: 229916858
Following gene: 229916851
Centisome position: 36.73
GC content: 50.79
Gene sequence:
>567_bases ATGGGTTCACATTTGATGCATCTCGTCATCGCGAACGAGATGTTACCAGCGTTATCGGAGATTGATGAGGTCGCATTTTT GCTTGGTAGTCTCGCACCGGATGCAACGACAGACAAAGAGGCATCCCATTACTACGCAGGACGCCATGATGATTTATCTC GACGCTTGGATCTGTCCCAATATTGGATTGACAGCAAGGAGGAAGACTTCTCATATCGACTCGGCTATTACGCGCATCTC GTCGCGGATGAGATTTGGTTGCAAGGATTCTATAAAGGTTGGTTGAAAGAGCTCATCACCCAGGACCCGTCAAAACAGGC GGCCTATTATGCGGACTTTGATGCACATAATGCTCGTCTCTCGGACCGACTCGGGATGTTCGATTTTGAACGCTTAAAAG GAAATCCAGAGCTCGTTGAACTGGTCGAGAAAATCGAGCGGGACGCGGCGATGACGGAGGAGGGGACGTACACGATGTTC CTCCCGCATCAATTGGATGGCTACGTGGATACGTGTGTCCGCCGCTGTCTTGAGATGGTCAAACGGAAGCGGGCGATGCT CGTATGA
Upstream 100 bases:
>100_bases AAGACTTTACTGACCGTTCAGTAAAGTTAGTCTATCAAAATTTGCGAGGGGTTGTCGAGATAGAACATTGATGGAATAAT CAGGGAAAAGGGGGCGTGAC
Downstream 100 bases:
>100_bases ACAAGCGATACGCACCATTATACGCAACGCTCGGACTCTTTATCGTGACGGTGATCACCTTCCTCACCTTGAACGGTCGG GTATTCCCGAACCTCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGSHLMHLVIANEMLPALSEIDEVAFLLGSLAPDATTDKEASHYYAGRHDDLSRRLDLSQYWIDSKEEDFSYRLGYYAHL VADEIWLQGFYKGWLKELITQDPSKQAAYYADFDAHNARLSDRLGMFDFERLKGNPELVELVEKIERDAAMTEEGTYTMF LPHQLDGYVDTCVRRCLEMVKRKRAMLV
Sequences:
>Translated_188_residues MGSHLMHLVIANEMLPALSEIDEVAFLLGSLAPDATTDKEASHYYAGRHDDLSRRLDLSQYWIDSKEEDFSYRLGYYAHL VADEIWLQGFYKGWLKELITQDPSKQAAYYADFDAHNARLSDRLGMFDFERLKGNPELVELVEKIERDAAMTEEGTYTMF LPHQLDGYVDTCVRRCLEMVKRKRAMLV >Mature_187_residues GSHLMHLVIANEMLPALSEIDEVAFLLGSLAPDATTDKEASHYYAGRHDDLSRRLDLSQYWIDSKEEDFSYRLGYYAHLV ADEIWLQGFYKGWLKELITQDPSKQAAYYADFDAHNARLSDRLGMFDFERLKGNPELVELVEKIERDAAMTEEGTYTMFL PHQLDGYVDTCVRRCLEMVKRKRAMLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21781; Mature: 21650
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSHLMHLVIANEMLPALSEIDEVAFLLGSLAPDATTDKEASHYYAGRHDDLSRRLDLSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHH YWIDSKEEDFSYRLGYYAHLVADEIWLQGFYKGWLKELITQDPSKQAAYYADFDAHNARL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHH SDRLGMFDFERLKGNPELVELVEKIERDAAMTEEGTYTMFLPHQLDGYVDTCVRRCLEMV HHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCHHHHHHHHHHHHH KRKRAMLV HHHHHCCC >Mature Secondary Structure GSHLMHLVIANEMLPALSEIDEVAFLLGSLAPDATTDKEASHYYAGRHDDLSRRLDLSQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHH YWIDSKEEDFSYRLGYYAHLVADEIWLQGFYKGWLKELITQDPSKQAAYYADFDAHNARL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHH SDRLGMFDFERLKGNPELVELVEKIERDAAMTEEGTYTMFLPHQLDGYVDTCVRRCLEMV HHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCHHHHHHHHHHHHH KRKRAMLV HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA