| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916825
Identifier: 229916825
GI number: 229916825
Start: 1065679
End: 1066374
Strand: Reverse
Name: 229916825
Synonym: EAT1b_1098
Alternate gene names: NA
Gene position: 1066374-1065679 (Counterclockwise)
Preceding gene: 229916826
Following gene: 229916824
Centisome position: 35.55
GC content: 47.27
Gene sequence:
>696_bases ATGTCAAAACGATTCATCATCCCATTGACTGGAATACTACTCACTTCTACATTATCCGTCGGGACCGGTCATGCGGCAGA GAATGAGCAACCTGTATCGATGCAAGAAGGGACTGTGCCCCAAACGGAAATAATCGAGGAGACGGACACAAAGCGTGTCG TTCGTTCGTTAGAGAACGAAGTTGAAACCGTCGCGACGTTTGATAAACTTGATAACACGGTAACGGTCGTCGTCAACGGA AAAGAACCAGTCACGATTCAACTCGAAGCGACTTCGTCGGAACAACCAGTCGCACTCGCACGTGCCGCAACTACGGGAGA AAATACGTTTAGTAACTATGAATATACAATTACCCACAGCAGTCCCGAGAAGTGGAACATCACGATGCCGAAAGGGGACT CGGTGATTCAAAAGAATGCGAAGACCGTCACATATAAATCAAGCACAAAATCAAATTTAAATCAGTTCAAGCAATCGGTC GACAAGATCAATAACCTCGAGCTACTCATTCTTGGTGGGGCCTCAATAACGGTGCTACTATCAGGAATCGCGCTTGTCCT CTCCCTTCCGACAGCTGGGAGTGGTACGTTGACGACAGCACTTGCTGCAGCCGGGGTATACGGAAATGTAGCACGACAAA TCATCCAGCTCTCGACTGAGATGAAAAACGCAAAAATTTACTACATGCGAGCGTAA
Upstream 100 bases:
>100_bases TAAAATACGGAGTCGAATTTTGTATAGGGTTCCACTCTGTTTAGGAGGGGCGTAAGGTAGAGGCATCTTCAACCCATCAA AAAATGGAAAGGATGAGACG
Downstream 100 bases:
>100_bases GGAGGGATATCCATGCAGGGCATCTTAACGATTCTAATCGTATTCATGGCGCTAGTCGTCATCGGGGTTGGTATCTTTTT TCTCCGACATCCTAGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSKRFIIPLTGILLTSTLSVGTGHAAENEQPVSMQEGTVPQTEIIEETDTKRVVRSLENEVETVATFDKLDNTVTVVVNG KEPVTIQLEATSSEQPVALARAATTGENTFSNYEYTITHSSPEKWNITMPKGDSVIQKNAKTVTYKSSTKSNLNQFKQSV DKINNLELLILGGASITVLLSGIALVLSLPTAGSGTLTTALAAAGVYGNVARQIIQLSTEMKNAKIYYMRA
Sequences:
>Translated_231_residues MSKRFIIPLTGILLTSTLSVGTGHAAENEQPVSMQEGTVPQTEIIEETDTKRVVRSLENEVETVATFDKLDNTVTVVVNG KEPVTIQLEATSSEQPVALARAATTGENTFSNYEYTITHSSPEKWNITMPKGDSVIQKNAKTVTYKSSTKSNLNQFKQSV DKINNLELLILGGASITVLLSGIALVLSLPTAGSGTLTTALAAAGVYGNVARQIIQLSTEMKNAKIYYMRA >Mature_230_residues SKRFIIPLTGILLTSTLSVGTGHAAENEQPVSMQEGTVPQTEIIEETDTKRVVRSLENEVETVATFDKLDNTVTVVVNGK EPVTIQLEATSSEQPVALARAATTGENTFSNYEYTITHSSPEKWNITMPKGDSVIQKNAKTVTYKSSTKSNLNQFKQSVD KINNLELLILGGASITVLLSGIALVLSLPTAGSGTLTTALAAAGVYGNVARQIIQLSTEMKNAKIYYMRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24853; Mature: 24721
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRFIIPLTGILLTSTLSVGTGHAAENEQPVSMQEGTVPQTEIIEETDTKRVVRSLENE CCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHH VETVATFDKLDNTVTVVVNGKEPVTIQLEATSSEQPVALARAATTGENTFSNYEYTITHS HHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEC SPEKWNITMPKGDSVIQKNAKTVTYKSSTKSNLNQFKQSVDKINNLELLILGGASITVLL CCCEEEEECCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH SGIALVLSLPTAGSGTLTTALAAAGVYGNVARQIIQLSTEMKNAKIYYMRA HHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure SKRFIIPLTGILLTSTLSVGTGHAAENEQPVSMQEGTVPQTEIIEETDTKRVVRSLENE CCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHH VETVATFDKLDNTVTVVVNGKEPVTIQLEATSSEQPVALARAATTGENTFSNYEYTITHS HHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEC SPEKWNITMPKGDSVIQKNAKTVTYKSSTKSNLNQFKQSVDKINNLELLILGGASITVLL CCCEEEEECCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH SGIALVLSLPTAGSGTLTTALAAAGVYGNVARQIIQLSTEMKNAKIYYMRA HHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA