| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916826
Identifier: 229916826
GI number: 229916826
Start: 1066680
End: 1068056
Strand: Reverse
Name: 229916826
Synonym: EAT1b_1099
Alternate gene names: NA
Gene position: 1068056-1066680 (Counterclockwise)
Preceding gene: 229916827
Following gene: 229916825
Centisome position: 35.6
GC content: 38.42
Gene sequence:
>1377_bases ATGAGCAAGATATGGAAAAAAGGAATCGCTTCACTACTTGGAATGCTGTTGATTTTATCGACTATGCCATTAGCCAGTGC GGAAAGTAGTCCGAAATTATTGCCTTTGAACACTACGGTGACAGGAGAACTATCACAAATACAAACGGAGGAAACGTATA CGTTTACACTACCTCAGACAGGTAAATTAACCTTGAGTATTGATTCAGCCGTTCAGGACGAGTTATATGTAAATCTAAAG GACTCAAATGAGCAGAGTATTTTTTTAGATATGGAAAATAGGATTGAAACAGAGAGGAAGAAAAAAGAAATCACGCTTCA TCTTGAAGCTGGTACATATTACTTAAAAGTAAATGTATATGATAAAGCTTGGAATACAGTCTGGAAGAAATTCACTATCA CAACAGAATACACACCTGTTGCAACGGATGACGCAGAACCAAATAATGATACATTGACCGCTCAAGAACTCATGATTGGA AAATCAACAAAGGGATTTTTCTCGCGTCAAGATTCAAAAGATGTACATGAGTTGCGATTGAATGAACCGGGTCGATTACA CATATCTTTCTTATCTGAGATGGATGACATCAATATCAGATTAATGGATTCAAATGAAACAATCGCATTCGAACATCAAG TAACGGCATTCAAAGGACAGATTGGCAAAAAAGATGTCGAGATTGATTTAGAACCGGGGACATATTTTTTATACATTGAG CAAGGAATGTTTTGGGATGATACGGGCGTTTATCAACTAGAAACTACATTCAACCCTGCACATAATCAGGAAGCAGAGCC AAATAATTCGCCTTCTCAATCAGTCAAGTTTCCGTTCTACACTAAACAAAAGGGCTTTCTATCTTGGAATGATCCAATCG ATTTATATCGTTTTGACATTCCAAAATCGAGTCAAGTTACCATCGATTTGACTACATCTATTGCAGAACAGGTCAGGGTG AGAGTGTATAGTGCCGATGGTGAATTATATCTTTCTCAGCCCGTTTATGGATCGGTGAAGGATCCACATCAGTTTTTAAA GACATTGCTATTGCCGAAGGGGACCTATTATTTTCAAATTGAAGACTACTTTGGAAATGATGATACGGGAGTATACGACT TAATCATTAAATCTAATCATCTATTACCTGTACTATCAATCAACAAAGTCACAACACGATCAACGAAAGTGAGTGGGAAG ACTGAAAAAGGGGCGACCGTCACGATGATGCTCGGCAAGAAGTCTTATAAGCGTAAGGCTGATTCGAAAGGCAACTATTC GTTCGCCATCAATAAGCAAAAAGCTGGGACGAGTATTAAAATCTCGACTAAGAATAAGTATGGGTCGACTGTGAAGACGG TTAAGGTGTCGAGGTAG
Upstream 100 bases:
>100_bases ATCTGAGAATCGGTTTTCCATATCGTTCAAAACCAAGCGTTTCGAACCTTTAGAACTCGCTAAAATAAAGCGTAGCGACT CGAATGGAGGATGAGGAACG
Downstream 100 bases:
>100_bases GATAGGATTCATCATTTAAGCTAGAGTCGACCATACGTCGATTCTAGCTGTTTTATTATTTTGTTGCGATGCATATGTCA GTTTGAAGACGCTTTGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Tyrosine Phosphatase Receptor Type J; Copper Amine Oxidase-Like Protein
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSKIWKKGIASLLGMLLILSTMPLASAESSPKLLPLNTTVTGELSQIQTEETYTFTLPQTGKLTLSIDSAVQDELYVNLK DSNEQSIFLDMENRIETERKKKEITLHLEAGTYYLKVNVYDKAWNTVWKKFTITTEYTPVATDDAEPNNDTLTAQELMIG KSTKGFFSRQDSKDVHELRLNEPGRLHISFLSEMDDINIRLMDSNETIAFEHQVTAFKGQIGKKDVEIDLEPGTYFLYIE QGMFWDDTGVYQLETTFNPAHNQEAEPNNSPSQSVKFPFYTKQKGFLSWNDPIDLYRFDIPKSSQVTIDLTTSIAEQVRV RVYSADGELYLSQPVYGSVKDPHQFLKTLLLPKGTYYFQIEDYFGNDDTGVYDLIIKSNHLLPVLSINKVTTRSTKVSGK TEKGATVTMMLGKKSYKRKADSKGNYSFAINKQKAGTSIKISTKNKYGSTVKTVKVSR
Sequences:
>Translated_458_residues MSKIWKKGIASLLGMLLILSTMPLASAESSPKLLPLNTTVTGELSQIQTEETYTFTLPQTGKLTLSIDSAVQDELYVNLK DSNEQSIFLDMENRIETERKKKEITLHLEAGTYYLKVNVYDKAWNTVWKKFTITTEYTPVATDDAEPNNDTLTAQELMIG KSTKGFFSRQDSKDVHELRLNEPGRLHISFLSEMDDINIRLMDSNETIAFEHQVTAFKGQIGKKDVEIDLEPGTYFLYIE QGMFWDDTGVYQLETTFNPAHNQEAEPNNSPSQSVKFPFYTKQKGFLSWNDPIDLYRFDIPKSSQVTIDLTTSIAEQVRV RVYSADGELYLSQPVYGSVKDPHQFLKTLLLPKGTYYFQIEDYFGNDDTGVYDLIIKSNHLLPVLSINKVTTRSTKVSGK TEKGATVTMMLGKKSYKRKADSKGNYSFAINKQKAGTSIKISTKNKYGSTVKTVKVSR >Mature_457_residues SKIWKKGIASLLGMLLILSTMPLASAESSPKLLPLNTTVTGELSQIQTEETYTFTLPQTGKLTLSIDSAVQDELYVNLKD SNEQSIFLDMENRIETERKKKEITLHLEAGTYYLKVNVYDKAWNTVWKKFTITTEYTPVATDDAEPNNDTLTAQELMIGK STKGFFSRQDSKDVHELRLNEPGRLHISFLSEMDDINIRLMDSNETIAFEHQVTAFKGQIGKKDVEIDLEPGTYFLYIEQ GMFWDDTGVYQLETTFNPAHNQEAEPNNSPSQSVKFPFYTKQKGFLSWNDPIDLYRFDIPKSSQVTIDLTTSIAEQVRVR VYSADGELYLSQPVYGSVKDPHQFLKTLLLPKGTYYFQIEDYFGNDDTGVYDLIIKSNHLLPVLSINKVTTRSTKVSGKT EKGATVTMMLGKKSYKRKADSKGNYSFAINKQKAGTSIKISTKNKYGSTVKTVKVSR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51865; Mature: 51734
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIWKKGIASLLGMLLILSTMPLASAESSPKLLPLNTTVTGELSQIQTEETYTFTLPQT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCHHHEECCCEEEEECCCC GKLTLSIDSAVQDELYVNLKDSNEQSIFLDMENRIETERKKKEITLHLEAGTYYLKVNVY CEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHHHHCCCCEEEEEEEECCEEEEEEEEE DKAWNTVWKKFTITTEYTPVATDDAEPNNDTLTAQELMIGKSTKGFFSRQDSKDVHELRL HHHHHCEEEEEEEEEECCCCCCCCCCCCCCCEEHHHHEECCCCCCCCCCCCCCCHHHEEC NEPGRLHISFLSEMDDINIRLMDSNETIAFEHQVTAFKGQIGKKDVEIDLEPGTYFLYIE CCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCEEEEEEE QGMFWDDTGVYQLETTFNPAHNQEAEPNNSPSQSVKFPFYTKQKGFLSWNDPIDLYRFDI CCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCEEECCCCCEEECCCCEEEEECC PKSSQVTIDLTTSIAEQVRVRVYSADGELYLSQPVYGSVKDPHQFLKTLLLPKGTYYFQI CCCCEEEEEEHHHHHCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE EDYFGNDDTGVYDLIIKSNHLLPVLSINKVTTRSTKVSGKTEKGATVTMMLGKKSYKRKA EEECCCCCCCEEEEEEECCCEEEEEEECCEEECCEECCCCCCCCCEEEEEECCCHHHHCC DSKGNYSFAINKQKAGTSIKISTKNKYGSTVKTVKVSR CCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure SKIWKKGIASLLGMLLILSTMPLASAESSPKLLPLNTTVTGELSQIQTEETYTFTLPQT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCHHHEECCCEEEEECCCC GKLTLSIDSAVQDELYVNLKDSNEQSIFLDMENRIETERKKKEITLHLEAGTYYLKVNVY CEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHHHHCCCCEEEEEEEECCEEEEEEEEE DKAWNTVWKKFTITTEYTPVATDDAEPNNDTLTAQELMIGKSTKGFFSRQDSKDVHELRL HHHHHCEEEEEEEEEECCCCCCCCCCCCCCCEEHHHHEECCCCCCCCCCCCCCCHHHEEC NEPGRLHISFLSEMDDINIRLMDSNETIAFEHQVTAFKGQIGKKDVEIDLEPGTYFLYIE CCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCEEEEEEE QGMFWDDTGVYQLETTFNPAHNQEAEPNNSPSQSVKFPFYTKQKGFLSWNDPIDLYRFDI CCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCEEECCCCCEEECCCCEEEEECC PKSSQVTIDLTTSIAEQVRVRVYSADGELYLSQPVYGSVKDPHQFLKTLLLPKGTYYFQI CCCCEEEEEEHHHHHCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE EDYFGNDDTGVYDLIIKSNHLLPVLSINKVTTRSTKVSGKTEKGATVTMMLGKKSYKRKA EEECCCCCCCEEEEEEECCCEEEEEEECCEEECCEECCCCCCCCCEEEEEECCCHHHHCC DSKGNYSFAINKQKAGTSIKISTKNKYGSTVKTVKVSR CCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA