Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916808

Identifier: 229916808

GI number: 229916808

Start: 1042405

End: 1044489

Strand: Direct

Name: 229916808

Synonym: EAT1b_1081

Alternate gene names: NA

Gene position: 1042405-1044489 (Clockwise)

Preceding gene: 229916806

Following gene: 229916809

Centisome position: 34.75

GC content: 55.35

Gene sequence:

>2085_bases
ATGAAACGAATCTTACTCGTCCTCGTCTTGATCGGTGCGTGGGGGTCTGTCACCCCGACCGACTCCGCTCAAGCTGCGAC
GAACCCTTTCCACATCCGCTCTGTCCCGAACGCCATCGTCTATGAGATGAAAAGCGGGAAGCTGACGAAAGTGGCGACCT
ATTCGACGACGAAACGCTATGCGGCGATCAGTACGTCCGGTTGGTATTACATCGCCCTGAGCGGTGGGAAGAAAGTCTAC
ATAAAGAAGAGTCAGGCGAAGCTTTTACTCGCCGATCCCATCACCCGTTCGAACCTGACATCGAGCGGGACAGCACGACT
GGCGCACGAATACATGCGACAAATGGCACCACATGTCCCTTATGAATACGAGCGTCTCAGTGAAGCGAAGGCGATCGACT
ACGCAAACCGGGCCCTTAAGGGGGATTGGTATGTCCCGTCCACACCGTATCGTCTATCCGTCCCAAACATCGACACGTTC
GATTGGCATCGGGACATCCCGAGCTCTTCAAGCAACTCGTATCCGTTCCAGATCCACTATTTGACGGTGTTGAACCAATT
GACACAAGCCTACAATGCGACAAACGACACCGCGTATTTGAAATACGGGATGCGCGTCGTGAAAAGTTGGACGAAAGCCC
ACCCCGTCGCCAACTACAAACAATACCGCTGGCCATATAATGACCACGGCACATCGGTCCGGACGTTCCACTTGTTGAAC
TTCTGGGACGTGTATAAGTCGTCGTCCCTTTACAAAGACACGGCATTCACAGGTCTGATGCTGCGGACGCTCCATGAGCA
CGGCACGTTGCTCGCGACATCGAGTTTTTATAAGTACGAACATAACCACGGGGTGTTCCAAGACATGGCGCTCACGGCGA
TCGCGCAGACGTTCCCACAGTTTGACCAAAGCGCGAATTGGAAAACCATTGCCGACAGCCGGCTCGATAAACAGATTCGC
CACAGCATCACGTCGGATGCCGTCCATCTCGAGCATTCACCGGGCTATCAGGCATACATGTATCACGTGCTCGACCGTTT
CGTCATCTGGGCGGACGAAAACCGCTTCACGCTCCCGTCCAGCATGAACCGTGTCGAGTATATGCCGAAACAGCTGACGT
ATATGGTGAAGCCGAACGGGACGCTCCCGATTTTCGGGGACACGTCCGGGGCTCGGCGCACGACGTCGATCATCCCGCAT
ATCGACGACTTCCCACAGCTCGCCTATGCGGTCTCTGGAGGGAAGGAAGGATCGCGCCCACCGCTCACGGTGAAGAAGAT
CAGCACGCAGTATAGCTTCATGCGTGAATATTGGTCCGCCCCACCGCGTGCCTTCAATCAGGCGACGCAAGTGATGATGA
CGGCGGGCTATCACAGTAGTGCCCATAAGCACGCCGATGATTTGAGCATCGACTTGTACGGGCTAGGTCGGGATTTCATC
ATCGAGACGGGGCGCTACGGCTACACGAACCGTCCGGAACGTCAGCGCGTCTTCGGGGTCGATGCCCACAATACGATCCA
TCGGGACGGGGCGAATCTCGACTTGAGCACGTCGATGCGCGAGAAGAGTAAGATCGTCACCGTCAAAAACCTCGGCCCAT
CACTCCTCGCGATGGGTGAAAGCAAGCTCATCGGCAAAGGGGCGACCCATCGTCGGACGCTTGTCTATGACAAGGCGCAG
ACGCTCGTCGTCTACGATCGGATCAGCTCCCCGACACAGGAGAAGTTCGTGCAGCGATTCCACCTTGCGGAAGGTCTGAA
ACTGCTCCAGAGTTCGATGGCGACCCAGAACGTCGTCTATGGCGACTCGAACGGTCGGACGATCCAACTCATGCAGCTCA
ACTTGAAAAATTCATCGATGCGCAACAGCACGAGTTTCGTCGCCGTCGAGGATTACGAATGGAAGCCGCGTCCGCAAGTC
ATCTCGTATAACACCGGGAAAGACGTGCGCTATCTTACGCTCATCCGACTCGACCAGTCGAAGACGACGATCCGGTCGGC
GAGTGTGAAAGTATCCGGTTCGAACTACATCGTGACGTACACGCTCTCGAATAAAGAGACGAGACAGATCAGTGTGCCAA
TCTAA

Upstream 100 bases:

>100_bases
CATTCCCTATTTGAAATTTAAAATATAGAAAATTAAGGAAATAAACTCACCTCATGGTATACTTTGAAAAAGAAGTAAAT
CCAATTTTTGAGGTGTATCT

Downstream 100 bases:

>100_bases
ATCAATGCAAAATTATTTCAATCTTCTAACGTTATCAGATGACCTCGAATCGATTCGAGGTCATCTTTTTTAAATCGTCA
CACCTTTTCGTTGCAACGAT

Product: Heparinase II/III family protein

Products: NA

Alternate protein names: Heparinase III Protein Heparitin Sulfate Lyase; Heparinase III Protein; Heparinase II/III-Like; Glycosyltransferase

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY
IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF
DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN
FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR
HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH
IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI
IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ
TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV
ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI

Sequences:

>Translated_694_residues
MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY
IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF
DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN
FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR
HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH
IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI
IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ
TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV
ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI
>Mature_694_residues
MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRYAAISTSGWYYIALSGGKKVY
IKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVPYEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTF
DWHRDIPSSSSNSYPFQIHYLTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN
FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQFDQSANWKTIADSRLDKQIR
HSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPSSMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPH
IDDFPQLAYAVSGGKEGSRPPLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI
IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGESKLIGKGATHRRTLVYDKAQ
TLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVYGDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQV
ISYNTGKDVRYLTLIRLDQSKTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78787; Mature: 78787

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRY
CHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE
AAISTSGWYYIALSGGKKVYIKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVP
EEEECCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
YEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTFDWHRDIPSSSSNSYPFQIHY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEH
LTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEH
FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQ
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHH
FDQSANWKTIADSRLDKQIRHSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPS
HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCEECCC
SMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPHIDDFPQLAYAVSGGKEGSRP
CCCHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCC
PLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCEEE
IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGE
EECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCHHEECCC
SKLIGKGATHRRTLVYDKAQTLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVY
CCEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
GDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQVISYNTGKDVRYLTLIRLDQS
ECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCC
KTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI
CCEEEEEEEEECCCCEEEEEEECCCCCCEEECCC
>Mature Secondary Structure
MKRILLVLVLIGAWGSVTPTDSAQAATNPFHIRSVPNAIVYEMKSGKLTKVATYSTTKRY
CHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCEE
AAISTSGWYYIALSGGKKVYIKKSQAKLLLADPITRSNLTSSGTARLAHEYMRQMAPHVP
EEEECCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
YEYERLSEAKAIDYANRALKGDWYVPSTPYRLSVPNIDTFDWHRDIPSSSSNSYPFQIHY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEH
LTVLNQLTQAYNATNDTAYLKYGMRVVKSWTKAHPVANYKQYRWPYNDHGTSVRTFHLLN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEEEEEEH
FWDVYKSSSLYKDTAFTGLMLRTLHEHGTLLATSSFYKYEHNHGVFQDMALTAIAQTFPQ
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHH
FDQSANWKTIADSRLDKQIRHSITSDAVHLEHSPGYQAYMYHVLDRFVIWADENRFTLPS
HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCEECCC
SMNRVEYMPKQLTYMVKPNGTLPIFGDTSGARRTTSIIPHIDDFPQLAYAVSGGKEGSRP
CCCHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCCCCHHHHEEECCCCCCCCC
PLTVKKISTQYSFMREYWSAPPRAFNQATQVMMTAGYHSSAHKHADDLSIDLYGLGRDFI
CEEHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCEEE
IETGRYGYTNRPERQRVFGVDAHNTIHRDGANLDLSTSMREKSKIVTVKNLGPSLLAMGE
EECCCCCCCCCCCHHEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCHHEECCC
SKLIGKGATHRRTLVYDKAQTLVVYDRISSPTQEKFVQRFHLAEGLKLLQSSMATQNVVY
CCEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
GDSNGRTIQLMQLNLKNSSMRNSTSFVAVEDYEWKPRPQVISYNTGKDVRYLTLIRLDQS
ECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCC
KTTIRSASVKVSGSNYIVTYTLSNKETRQISVPI
CCEEEEEEEEECCCCEEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA